Gene annotation
Transcriptome id Sobic.001G464600.1
Synonym FH6, ATFH6, Sb01g043600
Functional annotation formin-like protein 6 precursor, putative, expressed
UniProt A0A1B6QPV0
Pfam PF02181
Panther DB PTHR23213 PTHR23213:SF256
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25500 : formin homology 1
RAP-DB (Rice) LOC_Os10g20710.1 : formin-like protein 6 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039449 , Zm00025a053138 , Zm00025a037503 , Zm00025a026423 , Zm00025a017495 , Zm00025a001142 , Zm00025a006432
Brachypodium KQJ91061 , KQK23039 , KQJ82990 , KQJ82991
Barley HORVU4Hr1G069930.5 , HORVU4Hr1G069930.2 , HORVU4Hr1G069930.4 , HORVU4Hr1G069930.3 , HORVU4Hr1G069940.1
Wheat TraesCS4A02G047000 , TraesCS4B02G257800 , TraesCS4D02G257700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G050600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF6 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
2 Sobic.007G114500 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
3 Sobic.001G173500 - -
4 Sobic.001G290700 AGAP003819-PA, putative, expressed K09008: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
5 Sobic.001G012600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
7 Sobic.008G178800 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed K00549: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
8 Sobic.001G334900 X8 domain containing protein, expressed -
9 Sobic.001G460000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
10 Sobic.001G012200 similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
11 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
12 Sobic.004G005300 serine/threonine-protein kinase At1g18390 precursor, putative, expressed -
13 Sobic.007G130800 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
14 Sobic.001G012400 "UDP-glucose glucosyltransferase, up-regulated under drought stress "(PubMedID : 24655390)@p-hydroxymandelonitrile-O-glucosyltransferase(PubMedID : 10585420)@-(PubMedID : 27964718)@UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase. in vitro substrate regiospecificity(PubMedID : 12946413)@"Cyanohydrin beta-glucosyltransferase, similar to UDP-glucose glucosyltransferase, dhurrin biosynthesis"(PubMedID : 10585420)@cytokinin-O-glucosyltransferase 2, putative, expressed K13030: cyanohydrin beta-glucosyltransferase
15 Sobic.001G192100 "Belongs to the cytochrome P450 family, up-regulated under all the stress condition"(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Belongs to the cytochrome P450 family(PubMedID : 24655390)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
16 Sobic.010G258500 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed -
17 Sobic.009G246200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@secretory protein, putative, expressed -
18 Sobic.001G195800 aquaporin protein, putative, expressed K09874: aquaporin NIP
19 Sobic.004G257700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
20 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic001G464600 Sobic001G464600 Sobic007G050600 Sobic007G050600 Sobic001G464600--Sobic007G050600 Sobic007G114500 Sobic007G114500 Sobic001G464600--Sobic007G114500 Sobic001G173500 Sobic001G173500 Sobic001G464600--Sobic001G173500 Sobic001G290700 Sobic001G290700 Sobic001G464600--Sobic001G290700 Sobic001G012600 Sobic001G012600 Sobic001G464600--Sobic001G012600 Sobic009G063400 Sobic009G063400 Sobic001G464600--Sobic009G063400 Sobic008G178800 Sobic008G178800 Sobic001G464600--Sobic008G178800 Sobic001G334900 Sobic001G334900 Sobic001G464600--Sobic001G334900 Sobic001G460000 Sobic001G460000 Sobic001G464600--Sobic001G460000 Sobic007G050600--Sobic001G460000 Sobic007G050600--Sobic001G334900 Sobic004G295700 Sobic004G295700 Sobic007G050600--Sobic004G295700 Sobic007G050600--Sobic009G063400 Sobic004G296200 Sobic004G296200 Sobic007G050600--Sobic004G296200 Sobic009G232200 Sobic009G232200 Sobic007G050600--Sobic009G232200 Sobic007G050600--Sobic001G012600 Sobic004G257700 Sobic004G257700 Sobic007G050600--Sobic004G257700 Sobic010G228100 Sobic010G228100 Sobic007G050600--Sobic010G228100 Sobic003G394100 Sobic003G394100 Sobic007G114500--Sobic003G394100 Sobic009G251100 Sobic009G251100 Sobic007G114500--Sobic009G251100 Sobic008G039800 Sobic008G039800 Sobic007G114500--Sobic008G039800 Sobic009G167800 Sobic009G167800 Sobic007G114500--Sobic009G167800 Sobic002G313600 Sobic002G313600 Sobic007G114500--Sobic002G313600 Sobic003G017500 Sobic003G017500 Sobic007G114500--Sobic003G017500 Sobic010G217100 Sobic010G217100 Sobic007G114500--Sobic010G217100 Sobic001G512000 Sobic001G512000 Sobic007G114500--Sobic001G512000 Sobic002G161700 Sobic002G161700 Sobic007G114500--Sobic002G161700 Sobic003G327700 Sobic003G327700 Sobic001G173500--Sobic003G327700 Sobic003G244200 Sobic003G244200 Sobic001G173500--Sobic003G244200 Sobic003G125701 Sobic003G125701 Sobic001G173500--Sobic003G125701 Sobic001G222600 Sobic001G222600 Sobic001G173500--Sobic001G222600 Sobic007G069200 Sobic007G069200 Sobic001G173500--Sobic007G069200 Sobic001G147300 Sobic001G147300 Sobic001G173500--Sobic001G147300 Sobic006G084400 Sobic006G084400 Sobic001G173500--Sobic006G084400 Sobic001G173500--Sobic001G012600 Sobic001G012200 Sobic001G012200 Sobic001G173500--Sobic001G012200 Sobic003G216500 Sobic003G216500 Sobic001G290700--Sobic003G216500 Sobic002G272500 Sobic002G272500 Sobic001G290700--Sobic002G272500 Sobic006G002201 Sobic006G002201 Sobic001G290700--Sobic006G002201 Sobic008G150300 Sobic008G150300 Sobic001G290700--Sobic008G150300 Sobic010G026925 Sobic010G026925 Sobic001G290700--Sobic010G026925 Sobic003G170300 Sobic003G170300 Sobic001G290700--Sobic003G170300 Sobic006G211800 Sobic006G211800 Sobic001G290700--Sobic006G211800 Sobic003G165101 Sobic003G165101 Sobic001G290700--Sobic003G165101 Sobic006G020900 Sobic006G020900 Sobic001G290700--Sobic006G020900 Sobic001G012600--Sobic001G012200 Sobic001G012600--Sobic001G334900 Sobic001G012300 Sobic001G012300 Sobic001G012600--Sobic001G012300 Sobic002G347300 Sobic002G347300 Sobic001G012600--Sobic002G347300 Sobic001G012400 Sobic001G012400 Sobic001G012600--Sobic001G012400 Sobic001G012500 Sobic001G012500 Sobic001G012600--Sobic001G012500 Sobic001G012600--Sobic009G232200 Sobic001G345900 Sobic001G345900 Sobic001G012600--Sobic001G345900 Sobic001G012600--Sobic004G257700 Sobic009G125900 Sobic009G125900 Sobic009G063400--Sobic009G125900 Sobic002G075500 Sobic002G075500 Sobic009G063400--Sobic002G075500 Sobic009G026101 Sobic009G026101 Sobic009G063400--Sobic009G026101 Sobic002G118700 Sobic002G118700 Sobic009G063400--Sobic002G118700 Sobic010G096100 Sobic010G096100 Sobic009G063400--Sobic010G096100 Sobic009G063400--Sobic001G334900 Sobic010G090500 Sobic010G090500 Sobic009G063400--Sobic010G090500 Sobic001G208600 Sobic001G208600 Sobic009G063400--Sobic001G208600 Sobic006G075000 Sobic006G075000 Sobic009G063400--Sobic006G075000 Sobic006G038200 Sobic006G038200 Sobic008G178800--Sobic006G038200 Sobic008G178800--Sobic009G063400 Sobic010G258500 Sobic010G258500 Sobic008G178800--Sobic010G258500 Sobic008G178800--Sobic002G347300 Sobic008G178800--Sobic009G125900 Sobic004G282700 Sobic004G282700 Sobic008G178800--Sobic004G282700 Sobic008G178800--Sobic009G232200 Sobic009G017500 Sobic009G017500 Sobic008G178800--Sobic009G017500 Sobic010G067500 Sobic010G067500 Sobic008G178800--Sobic010G067500 Sobic001G334900--Sobic009G232200 Sobic001G334900--Sobic001G012600 Sobic001G334900--Sobic010G228100 Sobic001G334900--Sobic001G208600 Sobic009G033400 Sobic009G033400 Sobic001G334900--Sobic009G033400 Sobic001G334900--Sobic002G347300 Sobic001G334900--Sobic007G050600 Sobic001G334900--Sobic001G012200 Sobic001G334900--Sobic009G063400 Sobic001G460000--Sobic007G050600 Sobic001G460000--Sobic002G118700 Sobic001G460000--Sobic009G063400 Sobic001G460000--Sobic004G295700 Sobic001G460000--Sobic002G075500 Sobic001G460000--Sobic001G334900 Sobic002G321400 Sobic002G321400 Sobic001G460000--Sobic002G321400 Sobic001G460000--Sobic004G296200 Sobic004G265600 Sobic004G265600 Sobic001G460000--Sobic004G265600
Octagon: transcription factors


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