Gene annotation
Transcriptome id Sobic.001G471500.2,Sobic.001G471500.3
Synonym Sb01g044180
Functional annotation mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
UniProt C5WUQ4
Pfam PF02466
Panther DB PTHR14110 PTHR14110:SF8
NCBI CDD -
KEGG Orthology K17790; mitochondrial import inner membrane translocase subunit TIM22
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55510 : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
RAP-DB (Rice) LOC_Os03g09870.1 : mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
MaizeGDB (Corn) Zm00025a053185
Brachypodium KQK23155 , KQK23681
Barley -
Wheat TraesCS4D02G265300 , TraesCS4A02G044200 , TraesCS4B02G265300
Populus -


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cDNA sequences
Sobic.001G471500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
2 Sobic.003G393800 30S ribosomal protein S31, chloroplast precursor, putative, expressed K19033: PSRP4, 30S ribosomal protein S31
3 Sobic.003G014100 uncharacterized protein family UPF0016 domain containing protein, expressed -
4 Sobic.004G302900 mitochondrial carrier protein, putative, expressed K15111: solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26
5 Sobic.002G343700 expressed protein -
6 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
7 Sobic.001G104800 expressed protein -
8 Sobic.004G168500 peroxiredoxin, putative, expressed K03386: PRDX2_4, peroxiredoxin 2/4
9 Sobic.006G210800 coproporphyrinogen III oxidase, chloroplast precursor, putative, expressed K00228: CPOX, coproporphyrinogen III oxidase
10 Sobic.007G162300 OsGrx_S12 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
11 Sobic.002G190800 expressed protein -
12 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
13 Sobic.010G205000 haemolysin-III, putative, expressed K07297: adiponectin receptor
14 Sobic.004G116100 50S ribosomal protein L21, chloroplast precursor, putative, expressed K02888: RP-L21, MRPL21, large subunit ribosomal protein L21
15 Sobic.005G128100 acyl carrier protein, putative, expressed -
16 Sobic.007G107100 expressed protein -
17 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
18 Sobic.003G261200 formyl transferase, putative, expressed K00604: MTFMT, methionyl-tRNA formyltransferase
19 Sobic.001G383900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.010G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Superoxide dismutase (Os)(PubMedID : 27208977)@superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family


Gene co-expression network
sample Sobic001G471500 Sobic001G471500 Sobic003G225100 Sobic003G225100 Sobic001G471500--Sobic003G225100 Sobic003G393800 Sobic003G393800 Sobic001G471500--Sobic003G393800 Sobic003G014100 Sobic003G014100 Sobic001G471500--Sobic003G014100 Sobic004G302900 Sobic004G302900 Sobic001G471500--Sobic004G302900 Sobic002G343700 Sobic002G343700 Sobic001G471500--Sobic002G343700 Sobic001G076500 Sobic001G076500 Sobic001G471500--Sobic001G076500 Sobic001G104800 Sobic001G104800 Sobic001G471500--Sobic001G104800 Sobic004G168500 Sobic004G168500 Sobic001G471500--Sobic004G168500 Sobic006G210800 Sobic006G210800 Sobic001G471500--Sobic006G210800 Sobic001G122400 Sobic001G122400 Sobic003G225100--Sobic001G122400 Sobic007G171800 Sobic007G171800 Sobic003G225100--Sobic007G171800 Sobic005G110481 Sobic005G110481 Sobic003G225100--Sobic005G110481 Sobic010G095200 Sobic010G095200 Sobic003G225100--Sobic010G095200 Sobic004G335800 Sobic004G335800 Sobic003G225100--Sobic004G335800 Sobic007G013400 Sobic007G013400 Sobic003G225100--Sobic007G013400 Sobic002G251400 Sobic002G251400 Sobic003G225100--Sobic002G251400 Sobic003G386300 Sobic003G386300 Sobic003G225100--Sobic003G386300 Sobic001G527100 Sobic001G527100 Sobic003G225100--Sobic001G527100 Sobic010G233800 Sobic010G233800 Sobic003G393800--Sobic010G233800 Sobic003G393800--Sobic001G076500 Sobic003G246400 Sobic003G246400 Sobic003G393800--Sobic003G246400 Sobic009G179800 Sobic009G179800 Sobic003G393800--Sobic009G179800 Sobic001G427000 Sobic001G427000 Sobic003G393800--Sobic001G427000 Sobic001G453300 Sobic001G453300 Sobic003G393800--Sobic001G453300 Sobic004G116100 Sobic004G116100 Sobic003G393800--Sobic004G116100 Sobic005G128100 Sobic005G128100 Sobic003G393800--Sobic005G128100 Sobic003G246600 Sobic003G246600 Sobic003G393800--Sobic003G246600 Sobic001G391400 Sobic001G391400 Sobic003G014100--Sobic001G391400 Sobic003G014100--Sobic001G527100 Sobic003G014100--Sobic004G116100 Sobic004G164100 Sobic004G164100 Sobic003G014100--Sobic004G164100 Sobic003G014100--Sobic004G335800 Sobic001G040000 Sobic001G040000 Sobic003G014100--Sobic001G040000 Sobic003G014100--Sobic003G386300 Sobic003G014100--Sobic003G393800 Sobic010G116500 Sobic010G116500 Sobic003G014100--Sobic010G116500 Sobic004G302900--Sobic001G471500 Sobic010G033000 Sobic010G033000 Sobic004G302900--Sobic010G033000 Sobic007G026200 Sobic007G026200 Sobic004G302900--Sobic007G026200 Sobic001G151700 Sobic001G151700 Sobic004G302900--Sobic001G151700 Sobic002G151000 Sobic002G151000 Sobic004G302900--Sobic002G151000 Sobic001G347800 Sobic001G347800 Sobic004G302900--Sobic001G347800 Sobic006G152000 Sobic006G152000 Sobic004G302900--Sobic006G152000 Sobic004G302900--Sobic003G014100 Sobic008G084200 Sobic008G084200 Sobic004G302900--Sobic008G084200 Sobic003G132600 Sobic003G132600 Sobic002G343700--Sobic003G132600 Sobic002G343700--Sobic001G076500 Sobic004G017200 Sobic004G017200 Sobic002G343700--Sobic004G017200 Sobic002G343700--Sobic001G427000 Sobic002G343700--Sobic003G393800 Sobic002G343700--Sobic005G128100 Sobic001G383900 Sobic001G383900 Sobic002G343700--Sobic001G383900 Sobic002G343700--Sobic001G453300 Sobic004G044000 Sobic004G044000 Sobic002G343700--Sobic004G044000 Sobic001G076500--Sobic001G427000 Sobic001G027600 Sobic001G027600 Sobic001G076500--Sobic001G027600 Sobic001G076500--Sobic001G453300 Sobic001G076500--Sobic010G233800 Sobic001G076500--Sobic001G383900 Sobic001G076500--Sobic003G393800 Sobic001G076500--Sobic003G132600 Sobic001G076500--Sobic004G044000 Sobic001G076500--Sobic003G246400 Sobic001G291900 Sobic001G291900 Sobic001G104800--Sobic001G291900 Sobic009G030900 Sobic009G030900 Sobic001G104800--Sobic009G030900 Sobic001G368500 Sobic001G368500 Sobic001G104800--Sobic001G368500 Sobic001G469933 Sobic001G469933 Sobic001G104800--Sobic001G469933 Sobic001G104800--Sobic001G122400 Sobic003G324700 Sobic003G324700 Sobic001G104800--Sobic003G324700 Sobic001G104800--Sobic004G335800 Sobic007G090400 Sobic007G090400 Sobic001G104800--Sobic007G090400 Sobic002G152800 Sobic002G152800 Sobic001G104800--Sobic002G152800 Sobic004G168500--Sobic001G453300 Sobic004G168500--Sobic001G427000 Sobic004G168500--Sobic003G246400 Sobic004G168500--Sobic001G076500 Sobic004G168500--Sobic001G027600 Sobic004G168500--Sobic010G233800 Sobic003G256200 Sobic003G256200 Sobic004G168500--Sobic003G256200 Sobic004G168500--Sobic001G383900 Sobic008G030000 Sobic008G030000 Sobic004G168500--Sobic008G030000 Sobic009G180800 Sobic009G180800 Sobic006G210800--Sobic009G180800 Sobic001G203000 Sobic001G203000 Sobic006G210800--Sobic001G203000 Sobic008G051000 Sobic008G051000 Sobic006G210800--Sobic008G051000 Sobic007G116950 Sobic007G116950 Sobic006G210800--Sobic007G116950 Sobic004G234200 Sobic004G234200 Sobic006G210800--Sobic004G234200 Sobic004G238500 Sobic004G238500 Sobic006G210800--Sobic004G238500 Sobic001G382100 Sobic001G382100 Sobic006G210800--Sobic001G382100 Sobic004G114800 Sobic004G114800 Sobic006G210800--Sobic004G114800 Sobic004G054500 Sobic004G054500 Sobic006G210800--Sobic004G054500
Octagon: transcription factors


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