Gene annotation
Transcriptome id Sobic.004G302900.1
Synonym Sb04g033610, SAMC1, SAMT1
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt C5XS58
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF306
NCBI CDD KOG0768; Mitochondrial carrier protein PET8
KEGG Orthology K15111; solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39460 : S-adenosylmethionine carrier 1
RAP-DB (Rice) LOC_Os05g29860.2 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a021919
Brachypodium KQK12128
Barley -
Wheat TraesCS4A02G339600
Populus PNT35660 , PNT35661


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G471500 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
2 Sobic.010G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Superoxide dismutase (Os)(PubMedID : 27208977)@superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
3 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
4 Sobic.001G151700 glutamyl-tRNA, putative, expressed K02435: gatC, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C
5 Sobic.002G151000 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
6 Sobic.001G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 2, putative, expressed -
7 Sobic.006G152000 expressed protein -
8 Sobic.003G014100 uncharacterized protein family UPF0016 domain containing protein, expressed -
9 Sobic.008G084200 fasciclin domain containing protein, expressed -
10 Sobic.008G168000 Methyltransferase small domain containing protein, expressed K02493: hemK, prmC, release factor glutamine methyltransferase
11 Sobic.003G182100 tRNA methyltransferase, putative, expressed K03439: trmB, METTL1, tRNA (guanine-N7-)-methyltransferase
12 Sobic.003G292300 tRNA synthetase, putative, expressed K01867: WARS, tryptophanyl-tRNA synthetase
13 Sobic.002G280500 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.007G043200 (31.4% identity with SbCCoAOMT/43.2% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed -
15 Sobic.007G193800 serine/threonine-protein kinase RIO-like, putative, expressed K07178: RIO kinase 1
16 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
17 Sobic.003G392600 expressed protein -
18 Sobic.004G162500 SAM domain family protein, expressed -
19 Sobic.002G343700 expressed protein -
20 Sobic.006G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G302900 Sobic004G302900 Sobic001G471500 Sobic001G471500 Sobic004G302900--Sobic001G471500 Sobic010G033000 Sobic010G033000 Sobic004G302900--Sobic010G033000 Sobic007G026200 Sobic007G026200 Sobic004G302900--Sobic007G026200 Sobic001G151700 Sobic001G151700 Sobic004G302900--Sobic001G151700 Sobic002G151000 Sobic002G151000 Sobic004G302900--Sobic002G151000 Sobic001G347800 Sobic001G347800 Sobic004G302900--Sobic001G347800 Sobic006G152000 Sobic006G152000 Sobic004G302900--Sobic006G152000 Sobic003G014100 Sobic003G014100 Sobic004G302900--Sobic003G014100 Sobic008G084200 Sobic008G084200 Sobic004G302900--Sobic008G084200 Sobic003G225100 Sobic003G225100 Sobic001G471500--Sobic003G225100 Sobic003G393800 Sobic003G393800 Sobic001G471500--Sobic003G393800 Sobic001G471500--Sobic003G014100 Sobic001G471500--Sobic004G302900 Sobic002G343700 Sobic002G343700 Sobic001G471500--Sobic002G343700 Sobic001G076500 Sobic001G076500 Sobic001G471500--Sobic001G076500 Sobic001G104800 Sobic001G104800 Sobic001G471500--Sobic001G104800 Sobic004G168500 Sobic004G168500 Sobic001G471500--Sobic004G168500 Sobic006G210800 Sobic006G210800 Sobic001G471500--Sobic006G210800 Sobic001G383900 Sobic001G383900 Sobic010G033000--Sobic001G383900 Sobic010G033000--Sobic002G343700 Sobic003G132600 Sobic003G132600 Sobic010G033000--Sobic003G132600 Sobic010G033000--Sobic001G076500 Sobic001G172300 Sobic001G172300 Sobic010G033000--Sobic001G172300 Sobic010G033000--Sobic001G347800 Sobic010G033000--Sobic003G014100 Sobic001G453300 Sobic001G453300 Sobic010G033000--Sobic001G453300 Sobic010G012900 Sobic010G012900 Sobic010G033000--Sobic010G012900 Sobic001G069500 Sobic001G069500 Sobic007G026200--Sobic001G069500 Sobic007G211100 Sobic007G211100 Sobic007G026200--Sobic007G211100 Sobic001G188600 Sobic001G188600 Sobic007G026200--Sobic001G188600 Sobic004G109000 Sobic004G109000 Sobic007G026200--Sobic004G109000 Sobic002G189600 Sobic002G189600 Sobic007G026200--Sobic002G189600 Sobic006G281066 Sobic006G281066 Sobic007G026200--Sobic006G281066 Sobic007G026200--Sobic010G012900 Sobic001G357200 Sobic001G357200 Sobic007G026200--Sobic001G357200 Sobic004G296800 Sobic004G296800 Sobic007G026200--Sobic004G296800 Sobic001G151700--Sobic001G383900 Sobic001G151700--Sobic007G026200 Sobic001G151700--Sobic001G069500 Sobic001G151700--Sobic010G012900 Sobic001G151700--Sobic003G132600 Sobic001G151700--Sobic001G188600 Sobic005G110481 Sobic005G110481 Sobic001G151700--Sobic005G110481 Sobic009G098100 Sobic009G098100 Sobic001G151700--Sobic009G098100 Sobic003G373300 Sobic003G373300 Sobic001G151700--Sobic003G373300 Sobic009G160500 Sobic009G160500 Sobic002G151000--Sobic009G160500 Sobic001G478600 Sobic001G478600 Sobic002G151000--Sobic001G478600 Sobic002G408900 Sobic002G408900 Sobic002G151000--Sobic002G408900 Sobic002G151000--Sobic002G189600 Sobic009G254100 Sobic009G254100 Sobic002G151000--Sobic009G254100 Sobic001G025800 Sobic001G025800 Sobic002G151000--Sobic001G025800 Sobic008G152000 Sobic008G152000 Sobic002G151000--Sobic008G152000 Sobic002G398700 Sobic002G398700 Sobic002G151000--Sobic002G398700 Sobic002G151000--Sobic007G026200 Sobic001G347800--Sobic001G172300 Sobic001G347800--Sobic010G012900 Sobic002G190800 Sobic002G190800 Sobic001G347800--Sobic002G190800 Sobic001G347800--Sobic001G357200 Sobic003G392000 Sobic003G392000 Sobic001G347800--Sobic003G392000 Sobic002G360200 Sobic002G360200 Sobic001G347800--Sobic002G360200 Sobic002G078000 Sobic002G078000 Sobic001G347800--Sobic002G078000 Sobic006G114300 Sobic006G114300 Sobic001G347800--Sobic006G114300 Sobic007G034500 Sobic007G034500 Sobic001G347800--Sobic007G034500 Sobic004G254600 Sobic004G254600 Sobic006G152000--Sobic004G254600 Sobic010G103200 Sobic010G103200 Sobic006G152000--Sobic010G103200 Sobic007G114000 Sobic007G114000 Sobic006G152000--Sobic007G114000 Sobic006G035500 Sobic006G035500 Sobic006G152000--Sobic006G035500 Sobic009G250900 Sobic009G250900 Sobic006G152000--Sobic009G250900 Sobic001G486700 Sobic001G486700 Sobic006G152000--Sobic001G486700 Sobic008G118600 Sobic008G118600 Sobic006G152000--Sobic008G118600 Sobic001G537500 Sobic001G537500 Sobic006G152000--Sobic001G537500 Sobic002G246700 Sobic002G246700 Sobic006G152000--Sobic002G246700 Sobic001G391400 Sobic001G391400 Sobic003G014100--Sobic001G391400 Sobic001G527100 Sobic001G527100 Sobic003G014100--Sobic001G527100 Sobic004G116100 Sobic004G116100 Sobic003G014100--Sobic004G116100 Sobic004G164100 Sobic004G164100 Sobic003G014100--Sobic004G164100 Sobic004G335800 Sobic004G335800 Sobic003G014100--Sobic004G335800 Sobic001G040000 Sobic001G040000 Sobic003G014100--Sobic001G040000 Sobic003G386300 Sobic003G386300 Sobic003G014100--Sobic003G386300 Sobic003G014100--Sobic003G393800 Sobic010G116500 Sobic010G116500 Sobic003G014100--Sobic010G116500 Sobic006G238000 Sobic006G238000 Sobic008G084200--Sobic006G238000 Sobic008G084200--Sobic001G076500 Sobic007G127600 Sobic007G127600 Sobic008G084200--Sobic007G127600 Sobic004G231800 Sobic004G231800 Sobic008G084200--Sobic004G231800 Sobic002G020000 Sobic002G020000 Sobic008G084200--Sobic002G020000 Sobic010G233800 Sobic010G233800 Sobic008G084200--Sobic010G233800 Sobic001G427000 Sobic001G427000 Sobic008G084200--Sobic001G427000 Sobic001G366500 Sobic001G366500 Sobic008G084200--Sobic001G366500 Sobic002G415400 Sobic002G415400 Sobic008G084200--Sobic002G415400
Octagon: transcription factors


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