Gene annotation
Transcriptome id Sobic.007G043200.1
Synonym Sb07g003580, SbCCoAOMT-7, SbCCoAOMT-like genes;caffeoyl-coenzyme A O-methyltransferases-like protein
Functional annotation (31.4% identity with SbCCoAOMT/43.2% similarity) (PubMedID : 27457122)
Functions are not investigated (PubMedID : 29721721)
caffeoyl-CoA O-methyltransferase, putative, expressed
UniProt C5YGX8
Pfam PF13578
Panther DB PTHR10509 PTHR10509:SF27
NCBI CDD KOG1663; O-methyltransferase
KEGG Orthology -
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G62000 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os08g05790.1 : caffeoyl-CoA O-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a055187
Brachypodium PNT66790 , KQJ95393 , KQJ95394 , KQJ95395
Barley HORVU7Hr1G071740.18 , HORVU7Hr1G071740.19 , HORVU7Hr1G071740.10 , HORVU7Hr1G071740.11 , HORVU7Hr1G071740.12 , HORVU7Hr1G071740.13 , HORVU7Hr1G071740.14 , HORVU7Hr1G071740.15 , HORVU7Hr1G071740.16 , HORVU7Hr1G071740.17 , HORVU7Hr1G071740.29 , HORVU7Hr1G071740.28 , HORVU7Hr1G071740.25 , HORVU7Hr1G071740.24 , HORVU7Hr1G071740.27 , HORVU7Hr1G071740.21 , HORVU7Hr1G071740.20 , HORVU7Hr1G071740.23 , HORVU7Hr1G071740.22 , HORVU7Hr1G071740.32 , HORVU7Hr1G071740.33 , HORVU7Hr1G071740.30 , HORVU7Hr1G071740.31 , HORVU7Hr1G071740.34 , HORVU7Hr1G071740.1 , HORVU7Hr1G071740.8 , HORVU7Hr1G071740.9 , HORVU7Hr1G071740.2 , HORVU7Hr1G071740.3 , HORVU7Hr1G071740.6 , HORVU7Hr1G071740.7 , HORVU7Hr1G071740.4 , HORVU7Hr1G071740.5
Wheat TraesCS7B02G202600 , TraesCS7A02G302500 , TraesCS7A02G302500 , TraesCS7D02G297800 , TraesCS7D02G297800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G138300 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
2 Sobic.001G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03437: RNA methyltransferase, TrmH family
3 Sobic.008G168000 Methyltransferase small domain containing protein, expressed K02493: hemK, prmC, release factor glutamine methyltransferase
4 Sobic.007G033200 fringe-related protein, putative, expressed -
5 Sobic.001G362400 PPR repeat containing protein, expressed -
6 Sobic.001G419900 Up-reguralion under heat(PubMedID : 24916767)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
7 Sobic.003G264000 cytidylyltransferase domain containing protein, expressed -
8 Sobic.001G418650 - -
9 Sobic.002G364000 myosin heavy chain-related, putative, expressed -
10 Sobic.001G178200 - -
11 Sobic.001G267266 - -
12 Sobic.004G078300 expressed protein -
13 Sobic.010G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Superoxide dismutase (Os)(PubMedID : 27208977)@superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
14 Sobic.001G451200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
15 Sobic.002G052500 - -
16 Sobic.002G343700 expressed protein -
17 Sobic.010G268100 pseudouridine synthase family protein, putative, expressed K15452: mitochondrial tRNA pseudouridine27/28 synthase
18 Sobic.001G339900 - -
19 Sobic.007G071400 PPR repeat domain containing protein, putative, expressed -
20 Sobic.007G193800 serine/threonine-protein kinase RIO-like, putative, expressed K07178: RIO kinase 1


Gene co-expression network
sample Sobic007G043200 Sobic007G043200 Sobic007G138300 Sobic007G138300 Sobic007G043200--Sobic007G138300 Sobic001G134600 Sobic001G134600 Sobic007G043200--Sobic001G134600 Sobic008G168000 Sobic008G168000 Sobic007G043200--Sobic008G168000 Sobic007G033200 Sobic007G033200 Sobic007G043200--Sobic007G033200 Sobic001G362400 Sobic001G362400 Sobic007G043200--Sobic001G362400 Sobic001G419900 Sobic001G419900 Sobic007G043200--Sobic001G419900 Sobic003G264000 Sobic003G264000 Sobic007G043200--Sobic003G264000 Sobic001G418650 Sobic001G418650 Sobic007G043200--Sobic001G418650 Sobic002G364000 Sobic002G364000 Sobic007G043200--Sobic002G364000 Sobic007G138300--Sobic007G043200 Sobic002G343700 Sobic002G343700 Sobic007G138300--Sobic002G343700 Sobic003G014100 Sobic003G014100 Sobic007G138300--Sobic003G014100 Sobic010G033000 Sobic010G033000 Sobic007G138300--Sobic010G033000 Sobic002G040300 Sobic002G040300 Sobic007G138300--Sobic002G040300 Sobic009G042200 Sobic009G042200 Sobic007G138300--Sobic009G042200 Sobic003G132600 Sobic003G132600 Sobic007G138300--Sobic003G132600 Sobic003G077400 Sobic003G077400 Sobic007G138300--Sobic003G077400 Sobic002G158800 Sobic002G158800 Sobic007G138300--Sobic002G158800 Sobic001G378550 Sobic001G378550 Sobic001G134600--Sobic001G378550 Sobic002G052500 Sobic002G052500 Sobic001G134600--Sobic002G052500 Sobic001G134600--Sobic001G419900 Sobic001G049000 Sobic001G049000 Sobic001G134600--Sobic001G049000 Sobic004G356600 Sobic004G356600 Sobic001G134600--Sobic004G356600 Sobic001G267266 Sobic001G267266 Sobic001G134600--Sobic001G267266 Sobic006G090201 Sobic006G090201 Sobic001G134600--Sobic006G090201 Sobic003G343100 Sobic003G343100 Sobic001G134600--Sobic003G343100 Sobic001G063900 Sobic001G063900 Sobic001G134600--Sobic001G063900 Sobic008G168000--Sobic001G134600 Sobic001G339900 Sobic001G339900 Sobic008G168000--Sobic001G339900 Sobic009G070900 Sobic009G070900 Sobic008G168000--Sobic009G070900 Sobic008G168000--Sobic001G378550 Sobic008G168000--Sobic002G052500 Sobic008G168000--Sobic001G049000 Sobic001G178200 Sobic001G178200 Sobic008G168000--Sobic001G178200 Sobic008G168000--Sobic007G043200 Sobic006G272450 Sobic006G272450 Sobic008G168000--Sobic006G272450 Sobic007G033200--Sobic008G168000 Sobic007G033200--Sobic007G043200 Sobic007G033200--Sobic007G138300 Sobic010G004001 Sobic010G004001 Sobic007G033200--Sobic010G004001 Sobic007G033200--Sobic001G178200 Sobic007G033200--Sobic001G418650 Sobic001G184900 Sobic001G184900 Sobic007G033200--Sobic001G184900 Sobic007G203100 Sobic007G203100 Sobic007G033200--Sobic007G203100 Sobic007G033200--Sobic001G134600 Sobic002G034400 Sobic002G034400 Sobic001G362400--Sobic002G034400 Sobic002G120200 Sobic002G120200 Sobic001G362400--Sobic002G120200 Sobic001G362400--Sobic007G043200 Sobic003G222400 Sobic003G222400 Sobic001G362400--Sobic003G222400 Sobic001G362400--Sobic001G419900 Sobic001G362400--Sobic001G134600 Sobic002G200500 Sobic002G200500 Sobic001G362400--Sobic002G200500 Sobic001G362400--Sobic004G356600 Sobic006G146900 Sobic006G146900 Sobic001G362400--Sobic006G146900 Sobic001G419900--Sobic001G134600 Sobic001G419900--Sobic002G034400 Sobic005G097700 Sobic005G097700 Sobic001G419900--Sobic005G097700 Sobic001G419900--Sobic002G052500 Sobic001G419900--Sobic004G356600 Sobic001G419900--Sobic001G378550 Sobic001G419900--Sobic006G090201 Sobic001G419900--Sobic009G070900 Sobic002G175550 Sobic002G175550 Sobic001G419900--Sobic002G175550 Sobic003G264000--Sobic008G168000 Sobic003G264000--Sobic002G034400 Sobic003G264000--Sobic007G043200 Sobic003G219400 Sobic003G219400 Sobic003G264000--Sobic003G219400 Sobic003G264000--Sobic001G362400 Sobic003G264000--Sobic002G200500 Sobic003G264000--Sobic001G267266 Sobic003G264000--Sobic002G052500 Sobic003G264000--Sobic002G120200 Sobic001G418650--Sobic001G339900 Sobic001G418650--Sobic009G070900 Sobic001G418650--Sobic001G178200 Sobic001G418650--Sobic001G378550 Sobic001G418650--Sobic006G272450 Sobic001G418650--Sobic001G134600 Sobic001G418650--Sobic002G052500 Sobic009G194600 Sobic009G194600 Sobic001G418650--Sobic009G194600 Sobic003G245700 Sobic003G245700 Sobic001G418650--Sobic003G245700 Sobic009G255800 Sobic009G255800 Sobic002G364000--Sobic009G255800 Sobic002G364000--Sobic007G043200 Sobic004G078300 Sobic004G078300 Sobic002G364000--Sobic004G078300 Sobic010G080600 Sobic010G080600 Sobic002G364000--Sobic010G080600 Sobic007G193800 Sobic007G193800 Sobic002G364000--Sobic007G193800 Sobic006G169800 Sobic006G169800 Sobic002G364000--Sobic006G169800 Sobic010G131000 Sobic010G131000 Sobic002G364000--Sobic010G131000 Sobic002G388500 Sobic002G388500 Sobic002G364000--Sobic002G388500 Sobic007G071400 Sobic007G071400 Sobic002G364000--Sobic007G071400
Octagon: transcription factors


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