Gene annotation
Transcriptome id Sobic.007G138300.1
Synonym Sb07g021390
Functional annotation CAAX amino terminal protease family protein, putative, expressed
UniProt A0A1B6PHQ5
Pfam PF02517
Panther DB PTHR10794 PTHR10794:SF48
NCBI CDD -
KEGG Orthology K07052; uncharacterized protein
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G14270 : CAAX amino terminal protease family protein
RAP-DB (Rice) LOC_Os08g33900.1 : CAAX amino terminal protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a005916 , Zm00025a046955
Brachypodium KQJ98466
Barley -
Wheat TraesCS7D02G156700 , TraesCS7B02G060300 , TraesCS7B02G060300 , TraesCS7A02G156300 , TraesCS7A02G156300
Populus -


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cDNA sequences
Sobic.007G138300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G043200 (31.4% identity with SbCCoAOMT/43.2% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed -
2 Sobic.002G343700 expressed protein -
3 Sobic.003G014100 uncharacterized protein family UPF0016 domain containing protein, expressed -
4 Sobic.010G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Superoxide dismutase (Os)(PubMedID : 27208977)@superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
5 Sobic.002G040300 expressed protein -
6 Sobic.009G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsDegp6 - Putative Deg protease homologue, expressed -
7 Sobic.003G132600 plastid-specific 50S ribosomal protein 5, chloroplast precursor, putative, expressed K19034: 50S ribosomal protein 5
8 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
9 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
10 Sobic.001G391400 S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
11 Sobic.009G237800 expressed protein -
12 Sobic.006G021600 uncharacterized membrane protein, putative, expressed -
13 Sobic.001G337600 expressed protein -
14 Sobic.007G033200 fringe-related protein, putative, expressed -
15 Sobic.002G077000 NAD dependent epimerase/dehydratase family protein, putative, expressed -
16 Sobic.001G099000 expressed protein -
17 Sobic.003G373300 DNA polymerase I, putative, expressed -
18 Sobic.005G128100 acyl carrier protein, putative, expressed -
19 Sobic.006G074100 ctr copper transporter family protein, putative, expressed -
20 Sobic.009G104700 prenyltransferase, putative, expressed K04040: chlG, chlorophyll/bacteriochlorophyll a synthase


Gene co-expression network
sample Sobic007G138300 Sobic007G138300 Sobic007G043200 Sobic007G043200 Sobic007G138300--Sobic007G043200 Sobic002G343700 Sobic002G343700 Sobic007G138300--Sobic002G343700 Sobic003G014100 Sobic003G014100 Sobic007G138300--Sobic003G014100 Sobic010G033000 Sobic010G033000 Sobic007G138300--Sobic010G033000 Sobic002G040300 Sobic002G040300 Sobic007G138300--Sobic002G040300 Sobic009G042200 Sobic009G042200 Sobic007G138300--Sobic009G042200 Sobic003G132600 Sobic003G132600 Sobic007G138300--Sobic003G132600 Sobic003G077400 Sobic003G077400 Sobic007G138300--Sobic003G077400 Sobic002G158800 Sobic002G158800 Sobic007G138300--Sobic002G158800 Sobic007G043200--Sobic007G138300 Sobic001G134600 Sobic001G134600 Sobic007G043200--Sobic001G134600 Sobic008G168000 Sobic008G168000 Sobic007G043200--Sobic008G168000 Sobic007G033200 Sobic007G033200 Sobic007G043200--Sobic007G033200 Sobic001G362400 Sobic001G362400 Sobic007G043200--Sobic001G362400 Sobic001G419900 Sobic001G419900 Sobic007G043200--Sobic001G419900 Sobic003G264000 Sobic003G264000 Sobic007G043200--Sobic003G264000 Sobic001G418650 Sobic001G418650 Sobic007G043200--Sobic001G418650 Sobic002G364000 Sobic002G364000 Sobic007G043200--Sobic002G364000 Sobic002G343700--Sobic003G132600 Sobic001G076500 Sobic001G076500 Sobic002G343700--Sobic001G076500 Sobic004G017200 Sobic004G017200 Sobic002G343700--Sobic004G017200 Sobic001G427000 Sobic001G427000 Sobic002G343700--Sobic001G427000 Sobic003G393800 Sobic003G393800 Sobic002G343700--Sobic003G393800 Sobic005G128100 Sobic005G128100 Sobic002G343700--Sobic005G128100 Sobic001G383900 Sobic001G383900 Sobic002G343700--Sobic001G383900 Sobic001G453300 Sobic001G453300 Sobic002G343700--Sobic001G453300 Sobic004G044000 Sobic004G044000 Sobic002G343700--Sobic004G044000 Sobic001G391400 Sobic001G391400 Sobic003G014100--Sobic001G391400 Sobic001G527100 Sobic001G527100 Sobic003G014100--Sobic001G527100 Sobic004G116100 Sobic004G116100 Sobic003G014100--Sobic004G116100 Sobic004G164100 Sobic004G164100 Sobic003G014100--Sobic004G164100 Sobic004G335800 Sobic004G335800 Sobic003G014100--Sobic004G335800 Sobic001G040000 Sobic001G040000 Sobic003G014100--Sobic001G040000 Sobic003G386300 Sobic003G386300 Sobic003G014100--Sobic003G386300 Sobic003G014100--Sobic003G393800 Sobic010G116500 Sobic010G116500 Sobic003G014100--Sobic010G116500 Sobic010G033000--Sobic001G383900 Sobic010G033000--Sobic002G343700 Sobic010G033000--Sobic003G132600 Sobic010G033000--Sobic001G076500 Sobic001G172300 Sobic001G172300 Sobic010G033000--Sobic001G172300 Sobic001G347800 Sobic001G347800 Sobic010G033000--Sobic001G347800 Sobic010G033000--Sobic003G014100 Sobic010G033000--Sobic001G453300 Sobic010G012900 Sobic010G012900 Sobic010G033000--Sobic010G012900 Sobic003G444500 Sobic003G444500 Sobic002G040300--Sobic003G444500 Sobic010G035200 Sobic010G035200 Sobic002G040300--Sobic010G035200 Sobic008G130900 Sobic008G130900 Sobic002G040300--Sobic008G130900 Sobic002G131700 Sobic002G131700 Sobic002G040300--Sobic002G131700 Sobic002G013700 Sobic002G013700 Sobic002G040300--Sobic002G013700 Sobic003G373300 Sobic003G373300 Sobic002G040300--Sobic003G373300 Sobic002G040300--Sobic009G042200 Sobic001G083100 Sobic001G083100 Sobic002G040300--Sobic001G083100 Sobic003G084500 Sobic003G084500 Sobic002G040300--Sobic003G084500 Sobic005G110481 Sobic005G110481 Sobic009G042200--Sobic005G110481 Sobic007G171800 Sobic007G171800 Sobic009G042200--Sobic007G171800 Sobic001G148200 Sobic001G148200 Sobic009G042200--Sobic001G148200 Sobic007G155600 Sobic007G155600 Sobic009G042200--Sobic007G155600 Sobic009G042200--Sobic001G391400 Sobic002G251400 Sobic002G251400 Sobic009G042200--Sobic002G251400 Sobic009G042200--Sobic004G335800 Sobic009G042200--Sobic003G444500 Sobic002G297400 Sobic002G297400 Sobic009G042200--Sobic002G297400 Sobic003G132600--Sobic001G427000 Sobic003G132600--Sobic001G453300 Sobic003G132600--Sobic001G383900 Sobic003G132600--Sobic001G076500 Sobic001G027600 Sobic001G027600 Sobic003G132600--Sobic001G027600 Sobic003G132600--Sobic001G391400 Sobic003G256200 Sobic003G256200 Sobic003G132600--Sobic003G256200 Sobic003G132600--Sobic002G343700 Sobic003G132600--Sobic003G393800 Sobic001G469933 Sobic001G469933 Sobic003G077400--Sobic001G469933 Sobic008G073100 Sobic008G073100 Sobic003G077400--Sobic008G073100 Sobic005G110400 Sobic005G110400 Sobic003G077400--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G077400--Sobic004G012900 Sobic001G368500 Sobic001G368500 Sobic003G077400--Sobic001G368500 Sobic002G401800 Sobic002G401800 Sobic003G077400--Sobic002G401800 Sobic003G387100 Sobic003G387100 Sobic003G077400--Sobic003G387100 Sobic003G160800 Sobic003G160800 Sobic003G077400--Sobic003G160800 Sobic004G336200 Sobic004G336200 Sobic003G077400--Sobic004G336200 Sobic001G099000 Sobic001G099000 Sobic002G158800--Sobic001G099000 Sobic002G158800--Sobic001G391400 Sobic003G324700 Sobic003G324700 Sobic002G158800--Sobic003G324700 Sobic007G015300 Sobic007G015300 Sobic002G158800--Sobic007G015300 Sobic002G158800--Sobic005G110481 Sobic001G122400 Sobic001G122400 Sobic002G158800--Sobic001G122400 Sobic004G338300 Sobic004G338300 Sobic002G158800--Sobic004G338300 Sobic005G184300 Sobic005G184300 Sobic002G158800--Sobic005G184300 Sobic009G104700 Sobic009G104700 Sobic002G158800--Sobic009G104700
Octagon: transcription factors


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