Gene annotation
Transcriptome id Sobic.001G495116.1
Synonym -
Functional annotation -
UniProt A0A1Z5SB93
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G343601 - K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
2 Sobic.001G342700 protein phosphotase protein, putative, expressed -
3 Sobic.006G033260 - -
4 Sobic.009G009400 expressed protein -
5 Sobic.001G357100 ZOS9-11 - C2H2 zinc finger protein, expressed -
6 Sobic.008G054150 - -
7 Sobic.002G146100 - -
8 Sobic.009G043700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.001G260000 SAP domain containing protein, expressed -
10 Sobic.004G115500 expressed protein -
11 Sobic.007G169500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@Ribosomal protein L1p/L10e family("PubMedID : 26759170,PubMedID : 24597475")@L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
12 Sobic.007G067300 Cupin domain containing protein, expressed -
13 Sobic.001G495164 - -
14 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
15 Sobic.001G343500 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
16 Sobic.007G155200 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
17 Sobic.007G158700 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@phospholipase A("PubMedID : 26759170,PubMedID : 24597475")@patatin, putative, expressed -
18 Sobic.002G182500 nucleic acid binding protein, putative, expressed -
19 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
20 Sobic.002G139400 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G495116 Sobic001G495116 Sobic001G343601 Sobic001G343601 Sobic001G495116--Sobic001G343601 Sobic001G342700 Sobic001G342700 Sobic001G495116--Sobic001G342700 Sobic006G033260 Sobic006G033260 Sobic001G495116--Sobic006G033260 Sobic009G009400 Sobic009G009400 Sobic001G495116--Sobic009G009400 Sobic001G357100 Sobic001G357100 Sobic001G495116--Sobic001G357100 Sobic008G054150 Sobic008G054150 Sobic001G495116--Sobic008G054150 Sobic002G146100 Sobic002G146100 Sobic001G495116--Sobic002G146100 Sobic009G043700 Sobic009G043700 Sobic001G495116--Sobic009G043700 Sobic001G260000 Sobic001G260000 Sobic001G495116--Sobic001G260000 Sobic001G343601--Sobic009G009400 Sobic001G343601--Sobic008G054150 Sobic001G343601--Sobic001G342700 Sobic001G343601--Sobic001G260000 Sobic007G169500 Sobic007G169500 Sobic001G343601--Sobic007G169500 Sobic001G343601--Sobic002G146100 Sobic004G115500 Sobic004G115500 Sobic001G343601--Sobic004G115500 Sobic001G343601--Sobic006G033260 Sobic007G158700 Sobic007G158700 Sobic001G343601--Sobic007G158700 Sobic007G067300 Sobic007G067300 Sobic001G342700--Sobic007G067300 Sobic001G342700--Sobic001G343601 Sobic001G342700--Sobic009G009400 Sobic005G169100 Sobic005G169100 Sobic001G342700--Sobic005G169100 Sobic001G342700--Sobic002G146100 Sobic001G342700--Sobic006G033260 Sobic002G182500 Sobic002G182500 Sobic001G342700--Sobic002G182500 Sobic008G068166 Sobic008G068166 Sobic001G342700--Sobic008G068166 Sobic001G342700--Sobic008G054150 Sobic006G033260--Sobic001G342700 Sobic006G033260--Sobic001G343601 Sobic006G033260--Sobic002G146100 Sobic006G033260--Sobic001G357100 Sobic006G033260--Sobic008G054150 Sobic006G033260--Sobic009G009400 Sobic006G033260--Sobic007G067300 Sobic006G033260--Sobic007G169500 Sobic006G033260--Sobic001G260000 Sobic009G009400--Sobic001G343601 Sobic009G009400--Sobic007G169500 Sobic009G009400--Sobic008G054150 Sobic009G009400--Sobic001G342700 Sobic009G009400--Sobic009G043700 Sobic009G009400--Sobic004G115500 Sobic009G009400--Sobic001G260000 Sobic009G009400--Sobic002G146100 Sobic009G009400--Sobic002G182500 Sobic001G357100--Sobic004G115500 Sobic003G307300 Sobic003G307300 Sobic001G357100--Sobic003G307300 Sobic001G357100--Sobic007G169500 Sobic001G357100--Sobic001G343601 Sobic001G357100--Sobic009G009400 Sobic001G279701 Sobic001G279701 Sobic001G357100--Sobic001G279701 Sobic007G155200 Sobic007G155200 Sobic001G357100--Sobic007G155200 Sobic001G357100--Sobic008G054150 Sobic010G084600 Sobic010G084600 Sobic001G357100--Sobic010G084600 Sobic008G054150--Sobic007G169500 Sobic008G054150--Sobic001G260000 Sobic008G054150--Sobic001G343601 Sobic008G054150--Sobic009G009400 Sobic008G054150--Sobic004G115500 Sobic008G054150--Sobic002G146100 Sobic006G057500 Sobic006G057500 Sobic008G054150--Sobic006G057500 Sobic004G341000 Sobic004G341000 Sobic008G054150--Sobic004G341000 Sobic004G311750 Sobic004G311750 Sobic008G054150--Sobic004G311750 Sobic002G146100--Sobic001G343601 Sobic002G146100--Sobic001G342700 Sobic002G146100--Sobic009G009400 Sobic002G146100--Sobic008G054150 Sobic002G146100--Sobic001G260000 Sobic002G146100--Sobic006G033260 Sobic002G146100--Sobic007G169500 Sobic001G343832 Sobic001G343832 Sobic002G146100--Sobic001G343832 Sobic002G146100--Sobic002G182500 Sobic009G043700--Sobic009G009400 Sobic009G043700--Sobic004G115500 Sobic009G043700--Sobic007G169500 Sobic009G043700--Sobic001G343601 Sobic009G043700--Sobic008G054150 Sobic009G043700--Sobic001G357100 Sobic009G043700--Sobic001G342700 Sobic001G495148 Sobic001G495148 Sobic009G043700--Sobic001G495148 Sobic009G043700--Sobic008G068166 Sobic001G260000--Sobic008G054150 Sobic001G260000--Sobic001G343601 Sobic001G260000--Sobic007G169500 Sobic001G260000--Sobic009G009400 Sobic001G260000--Sobic004G311750 Sobic001G260000--Sobic004G115500 Sobic001G260000--Sobic002G146100 Sobic008G029400 Sobic008G029400 Sobic001G260000--Sobic008G029400 Sobic001G260000--Sobic002G182500
Octagon: transcription factors


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