Gene annotation
Transcriptome id Sobic.001G531000.1
Synonym Sb01g049390
Functional annotation expressed protein
UniProt C5X0Z8
Pfam -
Panther DB PTHR33623 PTHR33623:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g02660.1 : expressed protein
MaizeGDB (Corn) Zm00025a000245
Brachypodium KQK23972
Barley -
Wheat TraesCS5A02G523600 , TraesCS5A02G523600 , TraesCS4B02G354300 , TraesCS4B02G354300 , TraesCS4D02G348000 , TraesCS4D02G348000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G036500 AGC_PVPK_like_kin82y.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
2 Sobic.007G136600 SET domain-containing protein, putative, expressed -
3 Sobic.003G095000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
4 Sobic.006G074100 ctr copper transporter family protein, putative, expressed -
5 Sobic.001G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 2, putative, expressed -
6 Sobic.005G218700 NB-ARC domain containing protein, expressed -
7 Sobic.008G136500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.003G229700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
9 Sobic.002G025300 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
10 Sobic.005G112632 - -
11 Sobic.006G227300 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
12 Sobic.002G343700 expressed protein -
13 Sobic.008G144300 cytochrome P450, putative, expressed -
14 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
15 Sobic.008G166050 - -
16 Sobic.001G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03437: RNA methyltransferase, TrmH family
17 Sobic.010G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Superoxide dismutase (Os)(PubMedID : 27208977)@superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
18 Sobic.004G017200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.008G084200 fasciclin domain containing protein, expressed -
20 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G531000 Sobic001G531000 Sobic005G036500 Sobic005G036500 Sobic001G531000--Sobic005G036500 Sobic007G136600 Sobic007G136600 Sobic001G531000--Sobic007G136600 Sobic003G095000 Sobic003G095000 Sobic001G531000--Sobic003G095000 Sobic006G074100 Sobic006G074100 Sobic001G531000--Sobic006G074100 Sobic001G347800 Sobic001G347800 Sobic001G531000--Sobic001G347800 Sobic005G218700 Sobic005G218700 Sobic001G531000--Sobic005G218700 Sobic008G136500 Sobic008G136500 Sobic001G531000--Sobic008G136500 Sobic003G229700 Sobic003G229700 Sobic001G531000--Sobic003G229700 Sobic002G025300 Sobic002G025300 Sobic001G531000--Sobic002G025300 Sobic003G287000 Sobic003G287000 Sobic005G036500--Sobic003G287000 Sobic005G036500--Sobic003G229700 Sobic008G189500 Sobic008G189500 Sobic005G036500--Sobic008G189500 Sobic001G472000 Sobic001G472000 Sobic005G036500--Sobic001G472000 Sobic003G007800 Sobic003G007800 Sobic005G036500--Sobic003G007800 Sobic002G128600 Sobic002G128600 Sobic005G036500--Sobic002G128600 Sobic005G036500--Sobic001G531000 Sobic001G363700 Sobic001G363700 Sobic005G036500--Sobic001G363700 Sobic005G036500--Sobic005G218700 Sobic007G136600--Sobic006G074100 Sobic007G136600--Sobic001G531000 Sobic002G226100 Sobic002G226100 Sobic007G136600--Sobic002G226100 Sobic007G136600--Sobic003G095000 Sobic002G343700 Sobic002G343700 Sobic007G136600--Sobic002G343700 Sobic009G138900 Sobic009G138900 Sobic007G136600--Sobic009G138900 Sobic010G060000 Sobic010G060000 Sobic007G136600--Sobic010G060000 Sobic001G281800 Sobic001G281800 Sobic007G136600--Sobic001G281800 Sobic001G276100 Sobic001G276100 Sobic007G136600--Sobic001G276100 Sobic004G249400 Sobic004G249400 Sobic003G095000--Sobic004G249400 Sobic004G044000 Sobic004G044000 Sobic003G095000--Sobic004G044000 Sobic001G076500 Sobic001G076500 Sobic003G095000--Sobic001G076500 Sobic007G127600 Sobic007G127600 Sobic003G095000--Sobic007G127600 Sobic001G453200 Sobic001G453200 Sobic003G095000--Sobic001G453200 Sobic004G017200 Sobic004G017200 Sobic003G095000--Sobic004G017200 Sobic010G116500 Sobic010G116500 Sobic003G095000--Sobic010G116500 Sobic001G427000 Sobic001G427000 Sobic003G095000--Sobic001G427000 Sobic003G095000--Sobic002G343700 Sobic006G074100--Sobic002G343700 Sobic006G074100--Sobic007G136600 Sobic004G309400 Sobic004G309400 Sobic006G074100--Sobic004G309400 Sobic006G074100--Sobic001G531000 Sobic006G074100--Sobic003G229700 Sobic006G074100--Sobic003G095000 Sobic006G074100--Sobic010G116500 Sobic009G206400 Sobic009G206400 Sobic006G074100--Sobic009G206400 Sobic004G343000 Sobic004G343000 Sobic006G074100--Sobic004G343000 Sobic001G172300 Sobic001G172300 Sobic001G347800--Sobic001G172300 Sobic010G012900 Sobic010G012900 Sobic001G347800--Sobic010G012900 Sobic002G190800 Sobic002G190800 Sobic001G347800--Sobic002G190800 Sobic001G357200 Sobic001G357200 Sobic001G347800--Sobic001G357200 Sobic003G392000 Sobic003G392000 Sobic001G347800--Sobic003G392000 Sobic002G360200 Sobic002G360200 Sobic001G347800--Sobic002G360200 Sobic002G078000 Sobic002G078000 Sobic001G347800--Sobic002G078000 Sobic006G114300 Sobic006G114300 Sobic001G347800--Sobic006G114300 Sobic007G034500 Sobic007G034500 Sobic001G347800--Sobic007G034500 Sobic003G114200 Sobic003G114200 Sobic005G218700--Sobic003G114200 Sobic005G218700--Sobic008G189500 Sobic005G218600 Sobic005G218600 Sobic005G218700--Sobic005G218600 Sobic005G218700--Sobic001G472000 Sobic001G255300 Sobic001G255300 Sobic005G218700--Sobic001G255300 Sobic003G068300 Sobic003G068300 Sobic005G218700--Sobic003G068300 Sobic008G163200 Sobic008G163200 Sobic005G218700--Sobic008G163200 Sobic009G070600 Sobic009G070600 Sobic005G218700--Sobic009G070600 Sobic007G170800 Sobic007G170800 Sobic005G218700--Sobic007G170800 Sobic008G136500--Sobic003G007800 Sobic005G190800 Sobic005G190800 Sobic008G136500--Sobic005G190800 Sobic003G131800 Sobic003G131800 Sobic008G136500--Sobic003G131800 Sobic006G175700 Sobic006G175700 Sobic008G136500--Sobic006G175700 Sobic008G136500--Sobic005G036500 Sobic001G338000 Sobic001G338000 Sobic008G136500--Sobic001G338000 Sobic008G136500--Sobic008G189500 Sobic003G327700 Sobic003G327700 Sobic008G136500--Sobic003G327700 Sobic008G136500--Sobic002G128600 Sobic003G229700--Sobic005G036500 Sobic003G229700--Sobic003G287000 Sobic007G142300 Sobic007G142300 Sobic003G229700--Sobic007G142300 Sobic003G229700--Sobic003G095000 Sobic005G227000 Sobic005G227000 Sobic003G229700--Sobic005G227000 Sobic003G229700--Sobic008G189500 Sobic003G229700--Sobic010G116500 Sobic003G229700--Sobic006G074100 Sobic005G147800 Sobic005G147800 Sobic003G229700--Sobic005G147800 Sobic002G280500 Sobic002G280500 Sobic002G025300--Sobic002G280500 Sobic002G025300--Sobic005G147800 Sobic004G296100 Sobic004G296100 Sobic002G025300--Sobic004G296100 Sobic010G096200 Sobic010G096200 Sobic002G025300--Sobic010G096200 Sobic002G025300--Sobic007G142300 Sobic001G265900 Sobic001G265900 Sobic002G025300--Sobic001G265900 Sobic002G206400 Sobic002G206400 Sobic002G025300--Sobic002G206400 Sobic002G397400 Sobic002G397400 Sobic002G025300--Sobic002G397400 Sobic002G045200 Sobic002G045200 Sobic002G025300--Sobic002G045200
Octagon: transcription factors


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