Gene annotation
Transcriptome id Sobic.001G536600.1
Synonym Sb01g049940
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
paramyosin, putative, expressed
UniProt A0A1Z5SC37
Pfam PF05701
Panther DB PTHR32054 PTHR32054:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26570 : Plant protein of unknown function (DUF827)
RAP-DB (Rice) LOC_Os03g01930.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a000166 , Zm00025a053545
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G027500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
2 Sobic.002G310900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTPase activating protein, putative, expressed -
3 Sobic.001G331500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G391600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding domain containing protein, expressed -
5 Sobic.001G135400 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@GATA transcription factor 25, putative, expressed -
6 Sobic.010G034600 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.008G032300 dual specificity protein phosphatase, putative, expressed -
8 Sobic.010G227900 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.010G261400 expressed protein -
10 Sobic.008G173800 K+ efflux antiporter 3(PubMedID : 26465154)@potasium efflux antiporter protein, putative, expressed -
11 Sobic.001G132600 histidine acid phosphatase, putative, expressed K13024: PPIP5K, inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase
12 Sobic.004G151800 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
13 Sobic.006G162200 NDH-M H PLASTOQUINONE DEHY, putative, expressed -
14 Sobic.009G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
15 Sobic.007G007200 - -
16 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
17 Sobic.003G318300 pentatricopeptide repeat domain containing protein, putative, expressed -
18 Sobic.001G540300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G154200 expressed protein -
20 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase


Gene co-expression network
sample Sobic001G536600 Sobic001G536600 Sobic003G027500 Sobic003G027500 Sobic001G536600--Sobic003G027500 Sobic002G310900 Sobic002G310900 Sobic001G536600--Sobic002G310900 Sobic001G331500 Sobic001G331500 Sobic001G536600--Sobic001G331500 Sobic003G391600 Sobic003G391600 Sobic001G536600--Sobic003G391600 Sobic001G135400 Sobic001G135400 Sobic001G536600--Sobic001G135400 Sobic010G034600 Sobic010G034600 Sobic001G536600--Sobic010G034600 Sobic008G032300 Sobic008G032300 Sobic001G536600--Sobic008G032300 Sobic010G227900 Sobic010G227900 Sobic001G536600--Sobic010G227900 Sobic010G261400 Sobic010G261400 Sobic001G536600--Sobic010G261400 Sobic003G027500--Sobic002G310900 Sobic003G027500--Sobic003G391600 Sobic003G027500--Sobic001G536600 Sobic002G307800 Sobic002G307800 Sobic003G027500--Sobic002G307800 Sobic004G151800 Sobic004G151800 Sobic003G027500--Sobic004G151800 Sobic002G181700 Sobic002G181700 Sobic003G027500--Sobic002G181700 Sobic010G007300 Sobic010G007300 Sobic003G027500--Sobic010G007300 Sobic008G173800 Sobic008G173800 Sobic003G027500--Sobic008G173800 Sobic003G134300 Sobic003G134300 Sobic003G027500--Sobic003G134300 Sobic003G010800 Sobic003G010800 Sobic002G310900--Sobic003G010800 Sobic003G403300 Sobic003G403300 Sobic002G310900--Sobic003G403300 Sobic002G310900--Sobic002G307800 Sobic010G134000 Sobic010G134000 Sobic002G310900--Sobic010G134000 Sobic006G270000 Sobic006G270000 Sobic002G310900--Sobic006G270000 Sobic002G310900--Sobic003G027500 Sobic002G407000 Sobic002G407000 Sobic002G310900--Sobic002G407000 Sobic010G165000 Sobic010G165000 Sobic002G310900--Sobic010G165000 Sobic003G433400 Sobic003G433400 Sobic002G310900--Sobic003G433400 Sobic004G165500 Sobic004G165500 Sobic001G331500--Sobic004G165500 Sobic001G298400 Sobic001G298400 Sobic001G331500--Sobic001G298400 Sobic007G105500 Sobic007G105500 Sobic001G331500--Sobic007G105500 Sobic006G093100 Sobic006G093100 Sobic001G331500--Sobic006G093100 Sobic003G367500 Sobic003G367500 Sobic001G331500--Sobic003G367500 Sobic004G215800 Sobic004G215800 Sobic001G331500--Sobic004G215800 Sobic002G404800 Sobic002G404800 Sobic001G331500--Sobic002G404800 Sobic003G036200 Sobic003G036200 Sobic001G331500--Sobic003G036200 Sobic009G048900 Sobic009G048900 Sobic001G331500--Sobic009G048900 Sobic002G324500 Sobic002G324500 Sobic003G391600--Sobic002G324500 Sobic003G318300 Sobic003G318300 Sobic003G391600--Sobic003G318300 Sobic005G039700 Sobic005G039700 Sobic003G391600--Sobic005G039700 Sobic002G220900 Sobic002G220900 Sobic003G391600--Sobic002G220900 Sobic006G120500 Sobic006G120500 Sobic003G391600--Sobic006G120500 Sobic003G391600--Sobic004G151800 Sobic003G042900 Sobic003G042900 Sobic003G391600--Sobic003G042900 Sobic004G154200 Sobic004G154200 Sobic003G391600--Sobic004G154200 Sobic002G186400 Sobic002G186400 Sobic003G391600--Sobic002G186400 Sobic004G069000 Sobic004G069000 Sobic001G135400--Sobic004G069000 Sobic001G135400--Sobic004G154200 Sobic010G255300 Sobic010G255300 Sobic001G135400--Sobic010G255300 Sobic003G028900 Sobic003G028900 Sobic001G135400--Sobic003G028900 Sobic001G135400--Sobic007G105500 Sobic009G015100 Sobic009G015100 Sobic001G135400--Sobic009G015100 Sobic003G086300 Sobic003G086300 Sobic001G135400--Sobic003G086300 Sobic001G528800 Sobic001G528800 Sobic001G135400--Sobic001G528800 Sobic001G135400--Sobic002G310900 Sobic004G056800 Sobic004G056800 Sobic010G034600--Sobic004G056800 Sobic003G421000 Sobic003G421000 Sobic010G034600--Sobic003G421000 Sobic008G018700 Sobic008G018700 Sobic010G034600--Sobic008G018700 Sobic001G323701 Sobic001G323701 Sobic010G034600--Sobic001G323701 Sobic007G226500 Sobic007G226500 Sobic010G034600--Sobic007G226500 Sobic002G098900 Sobic002G098900 Sobic010G034600--Sobic002G098900 Sobic010G109800 Sobic010G109800 Sobic010G034600--Sobic010G109800 Sobic006G079800 Sobic006G079800 Sobic010G034600--Sobic006G079800 Sobic001G067700 Sobic001G067700 Sobic010G034600--Sobic001G067700 Sobic008G098098 Sobic008G098098 Sobic008G032300--Sobic008G098098 Sobic010G128900 Sobic010G128900 Sobic008G032300--Sobic010G128900 Sobic002G110800 Sobic002G110800 Sobic008G032300--Sobic002G110800 Sobic009G145900 Sobic009G145900 Sobic008G032300--Sobic009G145900 Sobic001G000900 Sobic001G000900 Sobic008G032300--Sobic001G000900 Sobic003G028800 Sobic003G028800 Sobic008G032300--Sobic003G028800 Sobic008G119200 Sobic008G119200 Sobic008G032300--Sobic008G119200 Sobic002G101800 Sobic002G101800 Sobic008G032300--Sobic002G101800 Sobic006G123700 Sobic006G123700 Sobic008G032300--Sobic006G123700 Sobic001G540300 Sobic001G540300 Sobic010G227900--Sobic001G540300 Sobic010G104800 Sobic010G104800 Sobic010G227900--Sobic010G104800 Sobic001G073300 Sobic001G073300 Sobic010G227900--Sobic001G073300 Sobic010G227900--Sobic009G048900 Sobic009G256100 Sobic009G256100 Sobic010G227900--Sobic009G256100 Sobic002G390100 Sobic002G390100 Sobic010G227900--Sobic002G390100 Sobic010G227900--Sobic004G215800 Sobic004G112100 Sobic004G112100 Sobic010G227900--Sobic004G112100 Sobic006G153400 Sobic006G153400 Sobic010G227900--Sobic006G153400 Sobic010G261400--Sobic003G028800 Sobic008G050100 Sobic008G050100 Sobic010G261400--Sobic008G050100 Sobic010G261400--Sobic006G123700 Sobic010G261400--Sobic002G101800 Sobic010G136900 Sobic010G136900 Sobic010G261400--Sobic010G136900 Sobic002G228500 Sobic002G228500 Sobic010G261400--Sobic002G228500 Sobic003G347680 Sobic003G347680 Sobic010G261400--Sobic003G347680 Sobic005G184100 Sobic005G184100 Sobic010G261400--Sobic005G184100 Sobic001G303000 Sobic001G303000 Sobic010G261400--Sobic001G303000
Octagon: transcription factors


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