Gene annotation
Transcriptome id Sobic.007G007200.1
Synonym
Functional annotation -
UniProt A0A1B6PEZ9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a055247
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G046500 GTP-binding protein lepA, putative, expressed K03596: GTP-binding protein LepA
2 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
3 Sobic.003G179350 - -
4 Sobic.007G093900 acetyltransferase, GNAT family, putative, expressed -
5 Sobic.009G038701 - -
6 Sobic.006G120500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
7 Sobic.002G220900 expressed protein -
8 Sobic.004G027600 expressed protein -
9 Sobic.010G079000 Phosphotyrosine protein phosphatases superfamily protein(PubMedID : 26465154)@Phosphotyrosine protein phosphatases superfamily protein(PubMedID : 26465154)@tyrosine phosphatase family protein, putative, expressed K18045: SIW14, tyrosine-protein phosphatase SIW14
10 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
11 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
12 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
13 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
14 Sobic.001G504400 expressed protein -
15 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
16 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
17 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
18 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
19 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
20 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -


Gene co-expression network
sample Sobic007G007200 Sobic007G007200 Sobic004G046500 Sobic004G046500 Sobic007G007200--Sobic004G046500 Sobic009G237100 Sobic009G237100 Sobic007G007200--Sobic009G237100 Sobic003G179350 Sobic003G179350 Sobic007G007200--Sobic003G179350 Sobic007G093900 Sobic007G093900 Sobic007G007200--Sobic007G093900 Sobic009G038701 Sobic009G038701 Sobic007G007200--Sobic009G038701 Sobic006G120500 Sobic006G120500 Sobic007G007200--Sobic006G120500 Sobic002G220900 Sobic002G220900 Sobic007G007200--Sobic002G220900 Sobic004G027600 Sobic004G027600 Sobic007G007200--Sobic004G027600 Sobic010G079000 Sobic010G079000 Sobic007G007200--Sobic010G079000 Sobic002G298800 Sobic002G298800 Sobic004G046500--Sobic002G298800 Sobic001G393300 Sobic001G393300 Sobic004G046500--Sobic001G393300 Sobic004G103300 Sobic004G103300 Sobic004G046500--Sobic004G103300 Sobic003G094100 Sobic003G094100 Sobic004G046500--Sobic003G094100 Sobic007G103400 Sobic007G103400 Sobic004G046500--Sobic007G103400 Sobic002G275300 Sobic002G275300 Sobic004G046500--Sobic002G275300 Sobic007G108900 Sobic007G108900 Sobic004G046500--Sobic007G108900 Sobic007G135800 Sobic007G135800 Sobic004G046500--Sobic007G135800 Sobic002G198300 Sobic002G198300 Sobic004G046500--Sobic002G198300 Sobic007G009200 Sobic007G009200 Sobic009G237100--Sobic007G009200 Sobic006G207800 Sobic006G207800 Sobic009G237100--Sobic006G207800 Sobic006G238200 Sobic006G238200 Sobic009G237100--Sobic006G238200 Sobic001G100000 Sobic001G100000 Sobic009G237100--Sobic001G100000 Sobic001G491000 Sobic001G491000 Sobic009G237100--Sobic001G491000 Sobic009G237100--Sobic002G275300 Sobic010G035400 Sobic010G035400 Sobic009G237100--Sobic010G035400 Sobic001G102800 Sobic001G102800 Sobic009G237100--Sobic001G102800 Sobic010G181300 Sobic010G181300 Sobic009G237100--Sobic010G181300 Sobic009G219100 Sobic009G219100 Sobic003G179350--Sobic009G219100 Sobic003G306600 Sobic003G306600 Sobic003G179350--Sobic003G306600 Sobic007G185300 Sobic007G185300 Sobic003G179350--Sobic007G185300 Sobic004G154400 Sobic004G154400 Sobic003G179350--Sobic004G154400 Sobic003G179350--Sobic009G038701 Sobic009G093100 Sobic009G093100 Sobic003G179350--Sobic009G093100 Sobic001G536700 Sobic001G536700 Sobic003G179350--Sobic001G536700 Sobic001G504400 Sobic001G504400 Sobic003G179350--Sobic001G504400 Sobic009G062400 Sobic009G062400 Sobic003G179350--Sobic009G062400 Sobic007G093900--Sobic009G237100 Sobic007G093900--Sobic002G220900 Sobic009G237000 Sobic009G237000 Sobic007G093900--Sobic009G237000 Sobic007G093900--Sobic010G035400 Sobic005G204200 Sobic005G204200 Sobic007G093900--Sobic005G204200 Sobic003G301300 Sobic003G301300 Sobic007G093900--Sobic003G301300 Sobic007G093900--Sobic006G207800 Sobic007G093900--Sobic007G103400 Sobic006G102000 Sobic006G102000 Sobic007G093900--Sobic006G102000 Sobic002G206300 Sobic002G206300 Sobic009G038701--Sobic002G206300 Sobic010G125833 Sobic010G125833 Sobic009G038701--Sobic010G125833 Sobic009G038701--Sobic001G504400 Sobic001G180200 Sobic001G180200 Sobic009G038701--Sobic001G180200 Sobic001G258200 Sobic001G258200 Sobic009G038701--Sobic001G258200 Sobic003G185900 Sobic003G185900 Sobic009G038701--Sobic003G185900 Sobic008G129900 Sobic008G129900 Sobic009G038701--Sobic008G129900 Sobic008G033000 Sobic008G033000 Sobic009G038701--Sobic008G033000 Sobic009G207900 Sobic009G207900 Sobic009G038701--Sobic009G207900 Sobic004G317500 Sobic004G317500 Sobic006G120500--Sobic004G317500 Sobic008G033200 Sobic008G033200 Sobic006G120500--Sobic008G033200 Sobic002G324500 Sobic002G324500 Sobic006G120500--Sobic002G324500 Sobic005G001700 Sobic005G001700 Sobic006G120500--Sobic005G001700 Sobic006G120500--Sobic004G027600 Sobic002G403600 Sobic002G403600 Sobic006G120500--Sobic002G403600 Sobic003G036200 Sobic003G036200 Sobic006G120500--Sobic003G036200 Sobic006G064100 Sobic006G064100 Sobic006G120500--Sobic006G064100 Sobic010G085100 Sobic010G085100 Sobic006G120500--Sobic010G085100 Sobic003G398800 Sobic003G398800 Sobic002G220900--Sobic003G398800 Sobic002G220900--Sobic008G033000 Sobic002G220900--Sobic007G103400 Sobic002G220900--Sobic001G504400 Sobic002G220900--Sobic007G009200 Sobic002G220900--Sobic009G237100 Sobic002G220900--Sobic003G185900 Sobic002G220900--Sobic005G204200 Sobic002G220900--Sobic010G035400 Sobic004G189800 Sobic004G189800 Sobic004G027600--Sobic004G189800 Sobic004G027600--Sobic003G185900 Sobic010G251700 Sobic010G251700 Sobic004G027600--Sobic010G251700 Sobic004G112100 Sobic004G112100 Sobic004G027600--Sobic004G112100 Sobic004G027600--Sobic009G237100 Sobic010G067100 Sobic010G067100 Sobic004G027600--Sobic010G067100 Sobic004G027600--Sobic010G085100 Sobic004G027600--Sobic001G258200 Sobic005G101200 Sobic005G101200 Sobic004G027600--Sobic005G101200 Sobic010G079000--Sobic009G237100 Sobic001G519800 Sobic001G519800 Sobic010G079000--Sobic001G519800 Sobic010G079000--Sobic001G100000 Sobic010G079000--Sobic001G102800 Sobic003G431700 Sobic003G431700 Sobic010G079000--Sobic003G431700 Sobic010G079000--Sobic001G491000 Sobic002G051100 Sobic002G051100 Sobic010G079000--Sobic002G051100 Sobic003G002300 Sobic003G002300 Sobic010G079000--Sobic003G002300 Sobic010G079000--Sobic006G207800
Octagon: transcription factors


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