Gene annotation
Transcriptome id Sobic.001G537001.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBW1 , A1E9T6
Pfam PF03040
Panther DB PTHR33650 PTHR33650:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G31040 : CemA-like proton extrusion protein-related
RAP-DB (Rice) LOC_Os08g12780.4 : chloroplast envelope membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a000164 , Zm00025a053547
Brachypodium KQJ95620 , KQJ95621
Barley -
Wheat TraesCS7B02G196800 , TraesCS7B02G196800 , TraesCS7B02G196800 , TraesCS7A02G286400 , TraesCS7A02G286400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G283800 transmembrane protein, putative, expressed -
2 Sobic.006G047300 Minichromosome maintenance (MCM2/3/5) family protein("PubMedID : 26759170,PubMedID : 24597475")@EMB1688, putative, expressed K06949: rsgA, ribosome biogenesis GTPase / thiamine phosphate phosphatase
3 Sobic.009G105200 PPR repeat containing protein, expressed -
4 Sobic.001G161400 single-stranded DNA-binding protein, putative, expressed -
5 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
6 Sobic.006G275000 tubulin/FtsZ domain containing protein, putative, expressed K03531: cell division protein FtsZ
7 Sobic.002G078000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KHG/KDPG aldolase, putative, expressed -
8 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
9 Sobic.001G346600 kinesin heavy chain isolog, putative, expressed -
10 Sobic.003G223000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.010G134500 exonuclease, putative, expressed -
12 Sobic.009G046800 TOC159, putative, expressed -
13 Sobic.001G104300 differentiation protein, putative, expressed K09761: 16S rRNA (uracil1498-N3)-methyltransferase
14 Sobic.004G016300 PPR repeat containing protein, expressed -
15 Sobic.002G272400 expressed protein -
16 Sobic.004G015700 serine/threonine-protein kinase receptor precursor, putative, expressed -
17 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
18 Sobic.001G460200 PPR repeat domain containing protein, putative, expressed -
19 Sobic.003G383500 rhodanese-like, putative, expressed -
20 Sobic.003G267500 expressed protein -


Gene co-expression network
sample Sobic001G537001 Sobic001G537001 Sobic003G283800 Sobic003G283800 Sobic001G537001--Sobic003G283800 Sobic006G047300 Sobic006G047300 Sobic001G537001--Sobic006G047300 Sobic009G105200 Sobic009G105200 Sobic001G537001--Sobic009G105200 Sobic001G161400 Sobic001G161400 Sobic001G537001--Sobic001G161400 Sobic009G231100 Sobic009G231100 Sobic001G537001--Sobic009G231100 Sobic006G275000 Sobic006G275000 Sobic001G537001--Sobic006G275000 Sobic002G078000 Sobic002G078000 Sobic001G537001--Sobic002G078000 Sobic001G448600 Sobic001G448600 Sobic001G537001--Sobic001G448600 Sobic001G346600 Sobic001G346600 Sobic001G537001--Sobic001G346600 Sobic006G237100 Sobic006G237100 Sobic003G283800--Sobic006G237100 Sobic009G046800 Sobic009G046800 Sobic003G283800--Sobic009G046800 Sobic003G283800--Sobic001G161400 Sobic010G086900 Sobic010G086900 Sobic003G283800--Sobic010G086900 Sobic005G009300 Sobic005G009300 Sobic003G283800--Sobic005G009300 Sobic004G297500 Sobic004G297500 Sobic003G283800--Sobic004G297500 Sobic004G003900 Sobic004G003900 Sobic003G283800--Sobic004G003900 Sobic002G140000 Sobic002G140000 Sobic003G283800--Sobic002G140000 Sobic001G395300 Sobic001G395300 Sobic003G283800--Sobic001G395300 Sobic004G040600 Sobic004G040600 Sobic006G047300--Sobic004G040600 Sobic006G091300 Sobic006G091300 Sobic006G047300--Sobic006G091300 Sobic001G460200 Sobic001G460200 Sobic006G047300--Sobic001G460200 Sobic004G015700 Sobic004G015700 Sobic006G047300--Sobic004G015700 Sobic003G225100 Sobic003G225100 Sobic006G047300--Sobic003G225100 Sobic006G111600 Sobic006G111600 Sobic006G047300--Sobic006G111600 Sobic003G267500 Sobic003G267500 Sobic006G047300--Sobic003G267500 Sobic007G015300 Sobic007G015300 Sobic006G047300--Sobic007G015300 Sobic003G265500 Sobic003G265500 Sobic006G047300--Sobic003G265500 Sobic010G228700 Sobic010G228700 Sobic009G105200--Sobic010G228700 Sobic001G544500 Sobic001G544500 Sobic009G105200--Sobic001G544500 Sobic007G000300 Sobic007G000300 Sobic009G105200--Sobic007G000300 Sobic009G005400 Sobic009G005400 Sobic009G105200--Sobic009G005400 Sobic009G105200--Sobic006G275000 Sobic002G052400 Sobic002G052400 Sobic009G105200--Sobic002G052400 Sobic007G225000 Sobic007G225000 Sobic009G105200--Sobic007G225000 Sobic010G100800 Sobic010G100800 Sobic009G105200--Sobic010G100800 Sobic001G261900 Sobic001G261900 Sobic009G105200--Sobic001G261900 Sobic001G161400--Sobic006G237100 Sobic003G039300 Sobic003G039300 Sobic001G161400--Sobic003G039300 Sobic006G204100 Sobic006G204100 Sobic001G161400--Sobic006G204100 Sobic003G330100 Sobic003G330100 Sobic001G161400--Sobic003G330100 Sobic002G404900 Sobic002G404900 Sobic001G161400--Sobic002G404900 Sobic003G444500 Sobic003G444500 Sobic001G161400--Sobic003G444500 Sobic009G234200 Sobic009G234200 Sobic001G161400--Sobic009G234200 Sobic003G084500 Sobic003G084500 Sobic001G161400--Sobic003G084500 Sobic003G286300 Sobic003G286300 Sobic001G161400--Sobic003G286300 Sobic009G201900 Sobic009G201900 Sobic009G231100--Sobic009G201900 Sobic002G225000 Sobic002G225000 Sobic009G231100--Sobic002G225000 Sobic002G377300 Sobic002G377300 Sobic009G231100--Sobic002G377300 Sobic001G518200 Sobic001G518200 Sobic009G231100--Sobic001G518200 Sobic003G420900 Sobic003G420900 Sobic009G231100--Sobic003G420900 Sobic003G223000 Sobic003G223000 Sobic009G231100--Sobic003G223000 Sobic005G031000 Sobic005G031000 Sobic009G231100--Sobic005G031000 Sobic001G104300 Sobic001G104300 Sobic009G231100--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic009G231100--Sobic005G022000 Sobic006G275000--Sobic009G005400 Sobic006G275000--Sobic009G105200 Sobic001G393900 Sobic001G393900 Sobic006G275000--Sobic001G393900 Sobic008G017100 Sobic008G017100 Sobic006G275000--Sobic008G017100 Sobic005G026400 Sobic005G026400 Sobic006G275000--Sobic005G026400 Sobic004G354000 Sobic004G354000 Sobic006G275000--Sobic004G354000 Sobic006G275000--Sobic007G225000 Sobic010G262100 Sobic010G262100 Sobic006G275000--Sobic010G262100 Sobic010G224700 Sobic010G224700 Sobic006G275000--Sobic010G224700 Sobic001G013900 Sobic001G013900 Sobic002G078000--Sobic001G013900 Sobic003G333700 Sobic003G333700 Sobic002G078000--Sobic003G333700 Sobic002G078000--Sobic001G104300 Sobic002G078000--Sobic005G022000 Sobic002G078000--Sobic003G223000 Sobic002G360200 Sobic002G360200 Sobic002G078000--Sobic002G360200 Sobic001G188600 Sobic001G188600 Sobic002G078000--Sobic001G188600 Sobic010G012900 Sobic010G012900 Sobic002G078000--Sobic010G012900 Sobic004G109000 Sobic004G109000 Sobic002G078000--Sobic004G109000 Sobic001G375000 Sobic001G375000 Sobic001G448600--Sobic001G375000 Sobic004G255500 Sobic004G255500 Sobic001G448600--Sobic004G255500 Sobic001G448600--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic001G448600--Sobic001G281500 Sobic002G013700 Sobic002G013700 Sobic001G448600--Sobic002G013700 Sobic009G104700 Sobic009G104700 Sobic001G448600--Sobic009G104700 Sobic001G448600--Sobic007G015300 Sobic003G128400 Sobic003G128400 Sobic001G448600--Sobic003G128400 Sobic010G027200 Sobic010G027200 Sobic001G448600--Sobic010G027200 Sobic005G117300 Sobic005G117300 Sobic001G346600--Sobic005G117300 Sobic001G346600--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic001G346600--Sobic009G092900 Sobic001G025800 Sobic001G025800 Sobic001G346600--Sobic001G025800 Sobic008G090900 Sobic008G090900 Sobic001G346600--Sobic008G090900 Sobic009G085200 Sobic009G085200 Sobic001G346600--Sobic009G085200 Sobic002G181132 Sobic002G181132 Sobic001G346600--Sobic002G181132 Sobic006G155100 Sobic006G155100 Sobic001G346600--Sobic006G155100 Sobic001G032200 Sobic001G032200 Sobic001G346600--Sobic001G032200
Octagon: transcription factors


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