Gene annotation
Transcriptome id Sobic.002G021700.1
Synonym Sb02g002010
Functional annotation OsFBX234 - F-box domain containing protein, expressed
UniProt C5X8P9
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF148
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g23900.1 : OsFBX234 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU6Hr1G077450.3 , HORVU6Hr1G077450.4 , HORVU4Hr1G043620.3 , HORVU4Hr1G043620.2 , HORVU4Hr1G043620.1 , HORVU4Hr1G043620.4 , HORVU6Hr1G077450.7 , HORVU6Hr1G077450.1 , HORVU6Hr1G077450.6
Wheat TraesCS6A02G083600 , TraesCS6D02G294100 , TraesCS4A02G215800 , TraesCS6D02G077200 , TraesCS5A02G487500 , TraesCS6A02G083600 , TraesCS4D02G097000 , TraesCS4D02G097000 , TraesCS4B02G100500 , TraesCSU02G142000 , TraesCS6A02G083500 , TraesCS2B02G512800 , TraesCS4A02G215700 , TraesCS2D02G486000 , TraesCS6B02G073700 , TraesCS6A02G314800 , TraesCS4D02G097100
Populus -


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cDNA sequences
Sobic.002G021700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G022200 OsFBL33 - F-box domain and LRR containing protein, expressed -
2 Sobic.005G170900 OsFBDUF64 - F-box and DUF domain containing protein -
3 Sobic.002G022300 OsFBX234 - F-box domain containing protein, expressed -
4 Sobic.009G185100 seven in absentia protein family domain containing protein, expressed -
5 Sobic.002G021600 OsFBX234 - F-box domain containing protein, expressed -
6 Sobic.001G458200 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
7 Sobic.001G458100 DNA methyltransferase protein, putative, expressed -
8 Sobic.002G389301 - -
9 Sobic.001G319900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -
11 Sobic.007G065800 Cupin domain containing protein, expressed -
12 Sobic.001G349000 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
13 Sobic.001G319800 cytochrome P450, putative, expressed -
14 Sobic.003G128300 NEDD8-activating enzyme E1 catalytic subunit, putative, expressed K10686: UBE1C, ubiquitin-activating enzyme E1 C
15 Sobic.008G038801 - -
16 Sobic.004G184200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PTF1, putative, expressed -
17 Sobic.008G064300 - -
18 Sobic.003G192000 3-5 exonuclease/ nucleic acid binding protein, putative, expressed K18740: EXD1, exonuclease 3'-5' domain-containing protein 1
19 Sobic.002G174500 OsFBX252 - F-box domain containing protein, expressed -
20 Sobic.008G134900 translocon-associated protein beta domain containing protein, expressed K13250: translocon-associated protein subunit beta


Gene co-expression network
sample Sobic002G021700 Sobic002G021700 Sobic002G022200 Sobic002G022200 Sobic002G021700--Sobic002G022200 Sobic005G170900 Sobic005G170900 Sobic002G021700--Sobic005G170900 Sobic002G022300 Sobic002G022300 Sobic002G021700--Sobic002G022300 Sobic009G185100 Sobic009G185100 Sobic002G021700--Sobic009G185100 Sobic002G021600 Sobic002G021600 Sobic002G021700--Sobic002G021600 Sobic001G458200 Sobic001G458200 Sobic002G021700--Sobic001G458200 Sobic001G458100 Sobic001G458100 Sobic002G021700--Sobic001G458100 Sobic002G389301 Sobic002G389301 Sobic002G021700--Sobic002G389301 Sobic001G319900 Sobic001G319900 Sobic002G021700--Sobic001G319900 Sobic002G022200--Sobic002G021700 Sobic002G022200--Sobic005G170900 Sobic002G022200--Sobic009G185100 Sobic002G022200--Sobic002G389301 Sobic006G011500 Sobic006G011500 Sobic002G022200--Sobic006G011500 Sobic002G022100 Sobic002G022100 Sobic002G022200--Sobic002G022100 Sobic007G026800 Sobic007G026800 Sobic002G022200--Sobic007G026800 Sobic003G170400 Sobic003G170400 Sobic002G022200--Sobic003G170400 Sobic004G213900 Sobic004G213900 Sobic002G022200--Sobic004G213900 Sobic005G170900--Sobic002G022200 Sobic005G158100 Sobic005G158100 Sobic005G170900--Sobic005G158100 Sobic003G261733 Sobic003G261733 Sobic005G170900--Sobic003G261733 Sobic005G170900--Sobic002G021700 Sobic005G170900--Sobic004G213900 Sobic005G170900--Sobic003G170400 Sobic002G103100 Sobic002G103100 Sobic005G170900--Sobic002G103100 Sobic009G121400 Sobic009G121400 Sobic005G170900--Sobic009G121400 Sobic005G170900--Sobic009G185100 Sobic010G037800 Sobic010G037800 Sobic002G022300--Sobic010G037800 Sobic010G041100 Sobic010G041100 Sobic002G022300--Sobic010G041100 Sobic002G019400 Sobic002G019400 Sobic002G022300--Sobic002G019400 Sobic001G067000 Sobic001G067000 Sobic002G022300--Sobic001G067000 Sobic007G081900 Sobic007G081900 Sobic002G022300--Sobic007G081900 Sobic002G374200 Sobic002G374200 Sobic002G022300--Sobic002G374200 Sobic005G041900 Sobic005G041900 Sobic002G022300--Sobic005G041900 Sobic003G217300 Sobic003G217300 Sobic002G022300--Sobic003G217300 Sobic002G174500 Sobic002G174500 Sobic002G022300--Sobic002G174500 Sobic009G185100--Sobic002G022100 Sobic009G185100--Sobic002G022200 Sobic002G016100 Sobic002G016100 Sobic009G185100--Sobic002G016100 Sobic009G185100--Sobic002G103100 Sobic007G141380 Sobic007G141380 Sobic009G185100--Sobic007G141380 Sobic009G260350 Sobic009G260350 Sobic009G185100--Sobic009G260350 Sobic003G164950 Sobic003G164950 Sobic009G185100--Sobic003G164950 Sobic001G337350 Sobic001G337350 Sobic009G185100--Sobic001G337350 Sobic009G185100--Sobic005G170900 Sobic009G207500 Sobic009G207500 Sobic002G021600--Sobic009G207500 Sobic002G101200 Sobic002G101200 Sobic002G021600--Sobic002G101200 Sobic002G015800 Sobic002G015800 Sobic002G021600--Sobic002G015800 Sobic002G100000 Sobic002G100000 Sobic002G021600--Sobic002G100000 Sobic010G209300 Sobic010G209300 Sobic002G021600--Sobic010G209300 Sobic003G092600 Sobic003G092600 Sobic002G021600--Sobic003G092600 Sobic003G307600 Sobic003G307600 Sobic002G021600--Sobic003G307600 Sobic002G408700 Sobic002G408700 Sobic002G021600--Sobic002G408700 Sobic005G001500 Sobic005G001500 Sobic002G021600--Sobic005G001500 Sobic003G192000 Sobic003G192000 Sobic001G458200--Sobic003G192000 Sobic003G128300 Sobic003G128300 Sobic001G458200--Sobic003G128300 Sobic001G532100 Sobic001G532100 Sobic001G458200--Sobic001G532100 Sobic002G359900 Sobic002G359900 Sobic001G458200--Sobic002G359900 Sobic002G093900 Sobic002G093900 Sobic001G458200--Sobic002G093900 Sobic008G134900 Sobic008G134900 Sobic001G458200--Sobic008G134900 Sobic003G148900 Sobic003G148900 Sobic001G458200--Sobic003G148900 Sobic002G306600 Sobic002G306600 Sobic001G458200--Sobic002G306600 Sobic002G044000 Sobic002G044000 Sobic001G458200--Sobic002G044000 Sobic008G096000 Sobic008G096000 Sobic001G458100--Sobic008G096000 Sobic001G367700 Sobic001G367700 Sobic001G458100--Sobic001G367700 Sobic001G196700 Sobic001G196700 Sobic001G458100--Sobic001G196700 Sobic005G110445 Sobic005G110445 Sobic001G458100--Sobic005G110445 Sobic004G317300 Sobic004G317300 Sobic001G458100--Sobic004G317300 Sobic001G341001 Sobic001G341001 Sobic001G458100--Sobic001G341001 Sobic009G132600 Sobic009G132600 Sobic001G458100--Sobic009G132600 Sobic008G109700 Sobic008G109700 Sobic001G458100--Sobic008G109700 Sobic004G176700 Sobic004G176700 Sobic001G458100--Sobic004G176700 Sobic002G044800 Sobic002G044800 Sobic002G389301--Sobic002G044800 Sobic007G065800 Sobic007G065800 Sobic002G389301--Sobic007G065800 Sobic004G333150 Sobic004G333150 Sobic002G389301--Sobic004G333150 Sobic004G240600 Sobic004G240600 Sobic002G389301--Sobic004G240600 Sobic009G009700 Sobic009G009700 Sobic002G389301--Sobic009G009700 Sobic006G190700 Sobic006G190700 Sobic002G389301--Sobic006G190700 Sobic006G214600 Sobic006G214600 Sobic002G389301--Sobic006G214600 Sobic009G009600 Sobic009G009600 Sobic002G389301--Sobic009G009600 Sobic009G021900 Sobic009G021900 Sobic002G389301--Sobic009G021900 Sobic006G268500 Sobic006G268500 Sobic001G319900--Sobic006G268500 Sobic008G140900 Sobic008G140900 Sobic001G319900--Sobic008G140900 Sobic009G157450 Sobic009G157450 Sobic001G319900--Sobic009G157450 Sobic006G234900 Sobic006G234900 Sobic001G319900--Sobic006G234900 Sobic008G158332 Sobic008G158332 Sobic001G319900--Sobic008G158332 Sobic009G071000 Sobic009G071000 Sobic001G319900--Sobic009G071000 Sobic007G118800 Sobic007G118800 Sobic001G319900--Sobic007G118800 Sobic006G227750 Sobic006G227750 Sobic001G319900--Sobic006G227750 Sobic002G422300 Sobic002G422300 Sobic001G319900--Sobic002G422300
Octagon: transcription factors


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