Gene annotation
Transcriptome id Sobic.002G022300.1
Synonym Sb02g002060
Functional annotation OsFBX234 - F-box domain containing protein, expressed
UniProt C5X8Q9
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF148
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G17530 : F-box and associated interaction domains-containing protein
RAP-DB (Rice) LOC_Os07g23900.1 : OsFBX234 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6B02G083300 , TraesCS1B02G271200 , TraesCS1D02G260600
Populus -


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cDNA sequences
Sobic.002G022300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G037800 expressed protein -
2 Sobic.010G041100 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
3 Sobic.002G019400 OsMADS69 - MADS-box family gene with M-alpha type-box, expressed -
4 Sobic.001G067000 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
5 Sobic.007G081900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
6 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
7 Sobic.005G041900 - -
8 Sobic.003G217300 zinc finger, C3HC4 type family protein, expressed -
9 Sobic.002G174500 OsFBX252 - F-box domain containing protein, expressed -
10 Sobic.003G055200 expressed protein -
11 Sobic.003G410200 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed K04649: HIP2, ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
12 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
13 Sobic.001G157600 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
14 Sobic.010G193700 expressed protein -
15 Sobic.001G025700 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
16 Sobic.004G218000 SET domain containing protein, expressed -
17 Sobic.007G140500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
18 Sobic.001G171100 expressed protein -
19 Sobic.005G164800 pumilio-family RNA binding repeat domain containing protein, expressed -
20 Sobic.007G010200 - -


Gene co-expression network
sample Sobic002G022300 Sobic002G022300 Sobic010G037800 Sobic010G037800 Sobic002G022300--Sobic010G037800 Sobic010G041100 Sobic010G041100 Sobic002G022300--Sobic010G041100 Sobic002G019400 Sobic002G019400 Sobic002G022300--Sobic002G019400 Sobic001G067000 Sobic001G067000 Sobic002G022300--Sobic001G067000 Sobic007G081900 Sobic007G081900 Sobic002G022300--Sobic007G081900 Sobic002G374200 Sobic002G374200 Sobic002G022300--Sobic002G374200 Sobic005G041900 Sobic005G041900 Sobic002G022300--Sobic005G041900 Sobic003G217300 Sobic003G217300 Sobic002G022300--Sobic003G217300 Sobic002G174500 Sobic002G174500 Sobic002G022300--Sobic002G174500 Sobic006G181500 Sobic006G181500 Sobic010G037800--Sobic006G181500 Sobic010G037800--Sobic005G041900 Sobic010G037800--Sobic002G022300 Sobic004G340100 Sobic004G340100 Sobic010G037800--Sobic004G340100 Sobic008G098700 Sobic008G098700 Sobic010G037800--Sobic008G098700 Sobic009G152120 Sobic009G152120 Sobic010G037800--Sobic009G152120 Sobic004G207100 Sobic004G207100 Sobic010G037800--Sobic004G207100 Sobic007G010200 Sobic007G010200 Sobic010G037800--Sobic007G010200 Sobic004G186300 Sobic004G186300 Sobic010G037800--Sobic004G186300 Sobic001G229300 Sobic001G229300 Sobic010G041100--Sobic001G229300 Sobic010G041100--Sobic007G010200 Sobic004G354100 Sobic004G354100 Sobic010G041100--Sobic004G354100 Sobic004G277400 Sobic004G277400 Sobic010G041100--Sobic004G277400 Sobic010G041100--Sobic008G098700 Sobic002G322400 Sobic002G322400 Sobic010G041100--Sobic002G322400 Sobic003G343200 Sobic003G343200 Sobic010G041100--Sobic003G343200 Sobic002G239400 Sobic002G239400 Sobic010G041100--Sobic002G239400 Sobic004G151200 Sobic004G151200 Sobic010G041100--Sobic004G151200 Sobic007G191200 Sobic007G191200 Sobic002G019400--Sobic007G191200 Sobic005G186400 Sobic005G186400 Sobic002G019400--Sobic005G186400 Sobic002G019400--Sobic001G067000 Sobic005G042400 Sobic005G042400 Sobic002G019400--Sobic005G042400 Sobic002G101500 Sobic002G101500 Sobic002G019400--Sobic002G101500 Sobic005G175150 Sobic005G175150 Sobic002G019400--Sobic005G175150 Sobic003G103100 Sobic003G103100 Sobic002G019400--Sobic003G103100 Sobic009G062300 Sobic009G062300 Sobic002G019400--Sobic009G062300 Sobic010G029800 Sobic010G029800 Sobic002G019400--Sobic010G029800 Sobic003G026900 Sobic003G026900 Sobic001G067000--Sobic003G026900 Sobic006G143300 Sobic006G143300 Sobic001G067000--Sobic006G143300 Sobic002G420800 Sobic002G420800 Sobic001G067000--Sobic002G420800 Sobic002G230400 Sobic002G230400 Sobic001G067000--Sobic002G230400 Sobic007G076500 Sobic007G076500 Sobic001G067000--Sobic007G076500 Sobic002G147466 Sobic002G147466 Sobic001G067000--Sobic002G147466 Sobic004G196800 Sobic004G196800 Sobic001G067000--Sobic004G196800 Sobic007G199500 Sobic007G199500 Sobic001G067000--Sobic007G199500 Sobic010G193700 Sobic010G193700 Sobic001G067000--Sobic010G193700 Sobic003G006200 Sobic003G006200 Sobic007G081900--Sobic003G006200 Sobic002G267400 Sobic002G267400 Sobic007G081900--Sobic002G267400 Sobic010G235700 Sobic010G235700 Sobic007G081900--Sobic010G235700 Sobic007G081900--Sobic004G207100 Sobic004G320100 Sobic004G320100 Sobic007G081900--Sobic004G320100 Sobic007G081900--Sobic002G374200 Sobic003G004600 Sobic003G004600 Sobic007G081900--Sobic003G004600 Sobic010G154000 Sobic010G154000 Sobic007G081900--Sobic010G154000 Sobic008G160500 Sobic008G160500 Sobic007G081900--Sobic008G160500 Sobic010G212700 Sobic010G212700 Sobic002G374200--Sobic010G212700 Sobic001G500500 Sobic001G500500 Sobic002G374200--Sobic001G500500 Sobic010G237800 Sobic010G237800 Sobic002G374200--Sobic010G237800 Sobic003G007200 Sobic003G007200 Sobic002G374200--Sobic003G007200 Sobic007G153700 Sobic007G153700 Sobic002G374200--Sobic007G153700 Sobic005G160200 Sobic005G160200 Sobic002G374200--Sobic005G160200 Sobic009G232500 Sobic009G232500 Sobic002G374200--Sobic009G232500 Sobic003G410200 Sobic003G410200 Sobic002G374200--Sobic003G410200 Sobic002G196500 Sobic002G196500 Sobic002G374200--Sobic002G196500 Sobic004G218000 Sobic004G218000 Sobic005G041900--Sobic004G218000 Sobic005G164800 Sobic005G164800 Sobic005G041900--Sobic005G164800 Sobic007G056900 Sobic007G056900 Sobic005G041900--Sobic007G056900 Sobic005G041900--Sobic003G217300 Sobic005G041900--Sobic010G193700 Sobic005G041900--Sobic002G174500 Sobic010G109300 Sobic010G109300 Sobic005G041900--Sobic010G109300 Sobic002G354800 Sobic002G354800 Sobic005G041900--Sobic002G354800 Sobic003G027000 Sobic003G027000 Sobic005G041900--Sobic003G027000 Sobic003G217300--Sobic004G218000 Sobic003G217300--Sobic005G164800 Sobic003G217300--Sobic007G056900 Sobic010G067200 Sobic010G067200 Sobic003G217300--Sobic010G067200 Sobic003G217300--Sobic005G041900 Sobic009G042600 Sobic009G042600 Sobic003G217300--Sobic009G042600 Sobic002G259301 Sobic002G259301 Sobic003G217300--Sobic002G259301 Sobic002G221100 Sobic002G221100 Sobic003G217300--Sobic002G221100 Sobic007G193300 Sobic007G193300 Sobic003G217300--Sobic007G193300 Sobic002G174500--Sobic002G147466 Sobic004G322901 Sobic004G322901 Sobic002G174500--Sobic004G322901 Sobic010G207900 Sobic010G207900 Sobic002G174500--Sobic010G207900 Sobic007G126000 Sobic007G126000 Sobic002G174500--Sobic007G126000 Sobic005G083280 Sobic005G083280 Sobic002G174500--Sobic005G083280 Sobic001G261529 Sobic001G261529 Sobic002G174500--Sobic001G261529 Sobic006G018751 Sobic006G018751 Sobic002G174500--Sobic006G018751 Sobic009G014900 Sobic009G014900 Sobic002G174500--Sobic009G014900 Sobic007G086701 Sobic007G086701 Sobic002G174500--Sobic007G086701
Octagon: transcription factors


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