Gene annotation
Transcriptome id Sobic.005G041900.1
Synonym
Functional annotation -
UniProt A0A1B6PQ24
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G218000 SET domain containing protein, expressed -
2 Sobic.005G164800 pumilio-family RNA binding repeat domain containing protein, expressed -
3 Sobic.007G056900 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
4 Sobic.003G217300 zinc finger, C3HC4 type family protein, expressed -
5 Sobic.010G193700 expressed protein -
6 Sobic.002G174500 OsFBX252 - F-box domain containing protein, expressed -
7 Sobic.010G109300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@acylphosphatase, putative, expressed K01512: acylphosphatase
8 Sobic.002G354800 zinc finger family protein, putative, expressed -
9 Sobic.003G027000 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
10 Sobic.006G143300 nuclear transport factor 2, putative, expressed -
11 Sobic.003G055200 expressed protein -
12 Sobic.002G349000 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
13 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
14 Sobic.002G238800 mago nashi, putative, expressed K12877: protein mago nashi
15 Sobic.002G147466 - -
16 Sobic.002G221100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
18 Sobic.009G152120 - -
19 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
20 Sobic.002G230400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42


Gene co-expression network
sample Sobic005G041900 Sobic005G041900 Sobic004G218000 Sobic004G218000 Sobic005G041900--Sobic004G218000 Sobic005G164800 Sobic005G164800 Sobic005G041900--Sobic005G164800 Sobic007G056900 Sobic007G056900 Sobic005G041900--Sobic007G056900 Sobic003G217300 Sobic003G217300 Sobic005G041900--Sobic003G217300 Sobic010G193700 Sobic010G193700 Sobic005G041900--Sobic010G193700 Sobic002G174500 Sobic002G174500 Sobic005G041900--Sobic002G174500 Sobic010G109300 Sobic010G109300 Sobic005G041900--Sobic010G109300 Sobic002G354800 Sobic002G354800 Sobic005G041900--Sobic002G354800 Sobic003G027000 Sobic003G027000 Sobic005G041900--Sobic003G027000 Sobic004G218000--Sobic003G217300 Sobic004G218000--Sobic007G056900 Sobic004G218000--Sobic005G164800 Sobic002G349000 Sobic002G349000 Sobic004G218000--Sobic002G349000 Sobic002G221100 Sobic002G221100 Sobic004G218000--Sobic002G221100 Sobic004G218000--Sobic005G041900 Sobic003G022900 Sobic003G022900 Sobic004G218000--Sobic003G022900 Sobic009G042600 Sobic009G042600 Sobic004G218000--Sobic009G042600 Sobic010G180200 Sobic010G180200 Sobic004G218000--Sobic010G180200 Sobic005G164800--Sobic003G217300 Sobic005G164800--Sobic004G218000 Sobic001G171100 Sobic001G171100 Sobic005G164800--Sobic001G171100 Sobic001G377600 Sobic001G377600 Sobic005G164800--Sobic001G377600 Sobic010G067200 Sobic010G067200 Sobic005G164800--Sobic010G067200 Sobic003G027200 Sobic003G027200 Sobic005G164800--Sobic003G027200 Sobic007G193300 Sobic007G193300 Sobic005G164800--Sobic007G193300 Sobic008G072900 Sobic008G072900 Sobic005G164800--Sobic008G072900 Sobic007G191200 Sobic007G191200 Sobic005G164800--Sobic007G191200 Sobic007G056900--Sobic004G218000 Sobic007G056900--Sobic005G164800 Sobic007G056900--Sobic003G217300 Sobic002G061800 Sobic002G061800 Sobic007G056900--Sobic002G061800 Sobic006G143300 Sobic006G143300 Sobic007G056900--Sobic006G143300 Sobic007G056900--Sobic005G041900 Sobic001G132200 Sobic001G132200 Sobic007G056900--Sobic001G132200 Sobic007G056900--Sobic009G042600 Sobic006G062600 Sobic006G062600 Sobic007G056900--Sobic006G062600 Sobic003G217300--Sobic004G218000 Sobic003G217300--Sobic005G164800 Sobic003G217300--Sobic007G056900 Sobic003G217300--Sobic010G067200 Sobic003G217300--Sobic005G041900 Sobic003G217300--Sobic009G042600 Sobic002G259301 Sobic002G259301 Sobic003G217300--Sobic002G259301 Sobic003G217300--Sobic002G221100 Sobic003G217300--Sobic007G193300 Sobic001G324800 Sobic001G324800 Sobic010G193700--Sobic001G324800 Sobic004G196800 Sobic004G196800 Sobic010G193700--Sobic004G196800 Sobic004G322901 Sobic004G322901 Sobic010G193700--Sobic004G322901 Sobic003G092600 Sobic003G092600 Sobic010G193700--Sobic003G092600 Sobic009G014900 Sobic009G014900 Sobic010G193700--Sobic009G014900 Sobic010G193700--Sobic002G174500 Sobic006G015800 Sobic006G015800 Sobic010G193700--Sobic006G015800 Sobic002G147466 Sobic002G147466 Sobic010G193700--Sobic002G147466 Sobic004G274500 Sobic004G274500 Sobic010G193700--Sobic004G274500 Sobic002G174500--Sobic002G147466 Sobic002G174500--Sobic004G322901 Sobic010G207900 Sobic010G207900 Sobic002G174500--Sobic010G207900 Sobic007G126000 Sobic007G126000 Sobic002G174500--Sobic007G126000 Sobic005G083280 Sobic005G083280 Sobic002G174500--Sobic005G083280 Sobic001G261529 Sobic001G261529 Sobic002G174500--Sobic001G261529 Sobic006G018751 Sobic006G018751 Sobic002G174500--Sobic006G018751 Sobic002G174500--Sobic009G014900 Sobic007G086701 Sobic007G086701 Sobic002G174500--Sobic007G086701 Sobic008G160600 Sobic008G160600 Sobic010G109300--Sobic008G160600 Sobic003G042200 Sobic003G042200 Sobic010G109300--Sobic003G042200 Sobic010G009600 Sobic010G009600 Sobic010G109300--Sobic010G009600 Sobic001G194100 Sobic001G194100 Sobic010G109300--Sobic001G194100 Sobic010G109300--Sobic002G354800 Sobic010G109300--Sobic005G041900 Sobic006G184200 Sobic006G184200 Sobic010G109300--Sobic006G184200 Sobic002G230400 Sobic002G230400 Sobic010G109300--Sobic002G230400 Sobic003G055200 Sobic003G055200 Sobic010G109300--Sobic003G055200 Sobic002G354800--Sobic002G230400 Sobic002G315100 Sobic002G315100 Sobic002G354800--Sobic002G315100 Sobic002G354800--Sobic006G184200 Sobic002G354800--Sobic002G349000 Sobic001G081800 Sobic001G081800 Sobic002G354800--Sobic001G081800 Sobic004G014100 Sobic004G014100 Sobic002G354800--Sobic004G014100 Sobic002G354800--Sobic006G143300 Sobic002G354800--Sobic003G055200 Sobic001G278700 Sobic001G278700 Sobic002G354800--Sobic001G278700 Sobic003G090000 Sobic003G090000 Sobic003G027000--Sobic003G090000 Sobic001G218600 Sobic001G218600 Sobic003G027000--Sobic001G218600 Sobic002G299200 Sobic002G299200 Sobic003G027000--Sobic002G299200 Sobic005G070301 Sobic005G070301 Sobic003G027000--Sobic005G070301 Sobic004G313400 Sobic004G313400 Sobic003G027000--Sobic004G313400 Sobic003G396500 Sobic003G396500 Sobic003G027000--Sobic003G396500 Sobic006G215800 Sobic006G215800 Sobic003G027000--Sobic006G215800 Sobic003G044000 Sobic003G044000 Sobic003G027000--Sobic003G044000 Sobic009G152120 Sobic009G152120 Sobic003G027000--Sobic009G152120
Octagon: transcription factors


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