Gene annotation
Transcriptome id Sobic.002G075700.1
Synonym Sb02g006310
Functional annotation receptor-like protein kinase 5 precursor, putative, expressed
UniProt C5XCS3
Pfam PF00560 PF08263 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF211
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G20480 : EF-TU receptor
RAP-DB (Rice) LOC_Os01g05640.1 : receptor-like protein kinase 5 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK16657 , KQK16656
Barley -
Wheat TraesCS7A02G550000 , TraesCS7A02G550100 , TraesCSU02G105600 , TraesCSU02G105400 , TraesCS7B02G473500
Populus -


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cDNA sequences
Sobic.002G075700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G157900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.002G224450 - -
3 Sobic.010G046500 csAtPR5, putative, expressed -
4 Sobic.008G025900 expressed protein -
5 Sobic.004G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.001G028800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
7 Sobic.009G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed K14493: gibberellin receptor GID1
8 Sobic.003G285400 heat shock protein DnaJ, putative, expressed -
9 Sobic.001G230900 - K07910: Ras-related protein Rab-18
10 Sobic.009G011700 protein kinase APK1A, chloroplast precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
11 Sobic.001G290200 leucine rich repeat containing protein, expressed -
12 Sobic.009G157500 MYB family transcription factor, putative, expressed -
13 Sobic.001G347600 paramyosin, putative, expressed -
14 Sobic.003G081100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsWAK2 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
15 Sobic.002G115801 - -
16 Sobic.001G035500 expressed protein -
17 Sobic.004G121000 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
18 Sobic.005G047800 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
19 Sobic.009G237600 transcription factor, putative, expressed K09060: plant G-box-binding factor
20 Sobic.009G032300 CGMC_GSK.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta


Gene co-expression network
sample Sobic002G075700 Sobic002G075700 Sobic009G157900 Sobic009G157900 Sobic002G075700--Sobic009G157900 Sobic002G224450 Sobic002G224450 Sobic002G075700--Sobic002G224450 Sobic010G046500 Sobic010G046500 Sobic002G075700--Sobic010G046500 Sobic008G025900 Sobic008G025900 Sobic002G075700--Sobic008G025900 Sobic004G129900 Sobic004G129900 Sobic002G075700--Sobic004G129900 Sobic001G028800 Sobic001G028800 Sobic002G075700--Sobic001G028800 Sobic009G134600 Sobic009G134600 Sobic002G075700--Sobic009G134600 Sobic003G285400 Sobic003G285400 Sobic002G075700--Sobic003G285400 Sobic001G230900 Sobic001G230900 Sobic002G075700--Sobic001G230900 Sobic004G203100 Sobic004G203100 Sobic009G157900--Sobic004G203100 Sobic010G144400 Sobic010G144400 Sobic009G157900--Sobic010G144400 Sobic009G237600 Sobic009G237600 Sobic009G157900--Sobic009G237600 Sobic009G157900--Sobic001G230900 Sobic002G236200 Sobic002G236200 Sobic009G157900--Sobic002G236200 Sobic001G478300 Sobic001G478300 Sobic009G157900--Sobic001G478300 Sobic001G427800 Sobic001G427800 Sobic009G157900--Sobic001G427800 Sobic010G238700 Sobic010G238700 Sobic009G157900--Sobic010G238700 Sobic010G042900 Sobic010G042900 Sobic009G157900--Sobic010G042900 Sobic002G224450--Sobic008G025900 Sobic004G121000 Sobic004G121000 Sobic002G224450--Sobic004G121000 Sobic001G240400 Sobic001G240400 Sobic002G224450--Sobic001G240400 Sobic005G221425 Sobic005G221425 Sobic002G224450--Sobic005G221425 Sobic001G287101 Sobic001G287101 Sobic002G224450--Sobic001G287101 Sobic005G139800 Sobic005G139800 Sobic002G224450--Sobic005G139800 Sobic009G209800 Sobic009G209800 Sobic002G224450--Sobic009G209800 Sobic005G110427 Sobic005G110427 Sobic002G224450--Sobic005G110427 Sobic003G436900 Sobic003G436900 Sobic002G224450--Sobic003G436900 Sobic010G046500--Sobic003G285400 Sobic010G148750 Sobic010G148750 Sobic010G046500--Sobic010G148750 Sobic003G356700 Sobic003G356700 Sobic010G046500--Sobic003G356700 Sobic003G266700 Sobic003G266700 Sobic010G046500--Sobic003G266700 Sobic003G201850 Sobic003G201850 Sobic010G046500--Sobic003G201850 Sobic001G181800 Sobic001G181800 Sobic010G046500--Sobic001G181800 Sobic005G094200 Sobic005G094200 Sobic010G046500--Sobic005G094200 Sobic006G218700 Sobic006G218700 Sobic010G046500--Sobic006G218700 Sobic004G200866 Sobic004G200866 Sobic010G046500--Sobic004G200866 Sobic008G025900--Sobic002G224450 Sobic008G025900--Sobic005G139800 Sobic008G025900--Sobic004G121000 Sobic008G025900--Sobic005G221425 Sobic008G025900--Sobic009G209800 Sobic008G025900--Sobic001G240400 Sobic009G157500 Sobic009G157500 Sobic008G025900--Sobic009G157500 Sobic008G025900--Sobic005G110427 Sobic008G049701 Sobic008G049701 Sobic008G025900--Sobic008G049701 Sobic004G145200 Sobic004G145200 Sobic004G129900--Sobic004G145200 Sobic006G087900 Sobic006G087900 Sobic004G129900--Sobic006G087900 Sobic006G076201 Sobic006G076201 Sobic004G129900--Sobic006G076201 Sobic001G403600 Sobic001G403600 Sobic004G129900--Sobic001G403600 Sobic005G231700 Sobic005G231700 Sobic004G129900--Sobic005G231700 Sobic002G362900 Sobic002G362900 Sobic004G129900--Sobic002G362900 Sobic005G195600 Sobic005G195600 Sobic004G129900--Sobic005G195600 Sobic009G079300 Sobic009G079300 Sobic004G129900--Sobic009G079300 Sobic003G278700 Sobic003G278700 Sobic004G129900--Sobic003G278700 Sobic003G034500 Sobic003G034500 Sobic001G028800--Sobic003G034500 Sobic006G194150 Sobic006G194150 Sobic001G028800--Sobic006G194150 Sobic003G293900 Sobic003G293900 Sobic001G028800--Sobic003G293900 Sobic001G516500 Sobic001G516500 Sobic001G028800--Sobic001G516500 Sobic006G194300 Sobic006G194300 Sobic001G028800--Sobic006G194300 Sobic008G126200 Sobic008G126200 Sobic001G028800--Sobic008G126200 Sobic006G184300 Sobic006G184300 Sobic001G028800--Sobic006G184300 Sobic001G363100 Sobic001G363100 Sobic001G028800--Sobic001G363100 Sobic001G230700 Sobic001G230700 Sobic001G028800--Sobic001G230700 Sobic003G119800 Sobic003G119800 Sobic009G134600--Sobic003G119800 Sobic009G134600--Sobic006G218700 Sobic009G230700 Sobic009G230700 Sobic009G134600--Sobic009G230700 Sobic007G178200 Sobic007G178200 Sobic009G134600--Sobic007G178200 Sobic009G059700 Sobic009G059700 Sobic009G134600--Sobic009G059700 Sobic003G056500 Sobic003G056500 Sobic009G134600--Sobic003G056500 Sobic002G330300 Sobic002G330300 Sobic009G134600--Sobic002G330300 Sobic001G290200 Sobic001G290200 Sobic009G134600--Sobic001G290200 Sobic004G031600 Sobic004G031600 Sobic009G134600--Sobic004G031600 Sobic004G317600 Sobic004G317600 Sobic003G285400--Sobic004G317600 Sobic003G285400--Sobic008G025900 Sobic003G026300 Sobic003G026300 Sobic003G285400--Sobic003G026300 Sobic003G351150 Sobic003G351150 Sobic003G285400--Sobic003G351150 Sobic003G285400--Sobic010G046500 Sobic010G100366 Sobic010G100366 Sobic003G285400--Sobic010G100366 Sobic003G285400--Sobic005G139800 Sobic005G167300 Sobic005G167300 Sobic003G285400--Sobic005G167300 Sobic003G285400--Sobic006G218700 Sobic001G230900--Sobic010G238700 Sobic009G036900 Sobic009G036900 Sobic001G230900--Sobic009G036900 Sobic001G230900--Sobic010G144400 Sobic002G068300 Sobic002G068300 Sobic001G230900--Sobic002G068300 Sobic003G024800 Sobic003G024800 Sobic001G230900--Sobic003G024800 Sobic008G132800 Sobic008G132800 Sobic001G230900--Sobic008G132800 Sobic010G228600 Sobic010G228600 Sobic001G230900--Sobic010G228600 Sobic001G090000 Sobic001G090000 Sobic001G230900--Sobic001G090000 Sobic001G040300 Sobic001G040300 Sobic001G230900--Sobic001G040300
Octagon: transcription factors


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