Gene annotation
Transcriptome id Sobic.002G185500.1
Synonym Sb02g023360
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter, putative, expressed
UniProt C5XBC3
Pfam PF00083
Panther DB PTHR23505 PTHR23505:SF11
NCBI CDD KOG1330; Sugar transporter/spinster transmembrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G10190 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os09g20490.1 : transporter, putative, expressed
MaizeGDB (Corn) Zm00025a046735 , Zm00025a046733 , Zm00025a046728 , Zm00025a046726 , Zm00025a006070
Brachypodium PNT68072 , KQJ90042 , PNT64471 , PNT64470 , KQJ90038 , KQJ90039
Barley HORVU1Hr1G083330.4 , HORVU1Hr1G083330.5 , HORVU1Hr1G083330.6 , HORVU1Hr1G083330.7 , HORVU1Hr1G083330.1 , HORVU1Hr1G083330.8 , HORVU5Hr1G058070.4 , HORVU5Hr1G058070.2 , HORVU5Hr1G058070.1 , HORVU5Hr1G058020.4 , HORVU5Hr1G058020.5 , HORVU5Hr1G058020.6 , HORVU5Hr1G058020.7 , HORVU5Hr1G058020.1 , HORVU5Hr1G058020.2 , HORVU5Hr1G058020.3 , HORVU5Hr1G058020.8 , HORVU5Hr1G058060.1 , HORVU5Hr1G058060.2 , HORVU5Hr1G058060.3 , HORVU5Hr1G058060.4 , HORVU5Hr1G058060.5
Wheat TraesCS5A02G189400 , TraesCS1D02G382400 , TraesCS1B02G395400 , TraesCS5B02G193800 , TraesCS5D02G201600 , TraesCS5B02G193700 , TraesCS5A02G189500 , TraesCS5D02G201500 , TraesCS4A02G063000 , TraesCS5B02G194100 , TraesCS5D02G201400 , TraesCS1A02G375200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family protein, putative, expressed -
2 Sobic.001G238300 expansin precursor, putative, expressed -
3 Sobic.005G073000 stress responsive protein, putative, expressed -
4 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
5 Sobic.002G261500 AIR12, putative, expressed -
6 Sobic.006G172601 - -
7 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.003G417100 esterase, putative, expressed -
9 Sobic.006G274933 - -
10 Sobic.002G361200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
11 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
12 Sobic.002G425000 VQ domain containing protein, putative, expressed -
13 Sobic.010G192900 expressed protein -
14 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
15 Sobic.004G227800 CBS domain-containing protein, putative, expressed -
16 Sobic.003G157600 expressed protein -
17 Sobic.009G088500 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.003G140600 peroxidase precursor, putative, expressed -
19 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
20 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -


Gene co-expression network
sample Sobic002G185500 Sobic002G185500 Sobic006G068800 Sobic006G068800 Sobic002G185500--Sobic006G068800 Sobic001G238300 Sobic001G238300 Sobic002G185500--Sobic001G238300 Sobic005G073000 Sobic005G073000 Sobic002G185500--Sobic005G073000 Sobic010G194100 Sobic010G194100 Sobic002G185500--Sobic010G194100 Sobic002G261500 Sobic002G261500 Sobic002G185500--Sobic002G261500 Sobic006G172601 Sobic006G172601 Sobic002G185500--Sobic006G172601 Sobic004G297900 Sobic004G297900 Sobic002G185500--Sobic004G297900 Sobic003G417100 Sobic003G417100 Sobic002G185500--Sobic003G417100 Sobic006G274933 Sobic006G274933 Sobic002G185500--Sobic006G274933 Sobic010G192900 Sobic010G192900 Sobic006G068800--Sobic010G192900 Sobic002G327100 Sobic002G327100 Sobic006G068800--Sobic002G327100 Sobic001G395800 Sobic001G395800 Sobic006G068800--Sobic001G395800 Sobic006G068800--Sobic004G297900 Sobic003G311800 Sobic003G311800 Sobic006G068800--Sobic003G311800 Sobic003G037500 Sobic003G037500 Sobic006G068800--Sobic003G037500 Sobic006G068800--Sobic005G073000 Sobic003G411200 Sobic003G411200 Sobic006G068800--Sobic003G411200 Sobic001G416200 Sobic001G416200 Sobic006G068800--Sobic001G416200 Sobic001G238300--Sobic006G172601 Sobic001G238300--Sobic002G261500 Sobic001G238300--Sobic004G297900 Sobic002G425000 Sobic002G425000 Sobic001G238300--Sobic002G425000 Sobic007G090469 Sobic007G090469 Sobic001G238300--Sobic007G090469 SobicK026900 SobicK026900 Sobic001G238300--SobicK026900 Sobic006G260200 Sobic006G260200 Sobic001G238300--Sobic006G260200 Sobic007G050200 Sobic007G050200 Sobic001G238300--Sobic007G050200 Sobic003G140700 Sobic003G140700 Sobic001G238300--Sobic003G140700 Sobic003G053300 Sobic003G053300 Sobic005G073000--Sobic003G053300 Sobic005G073000--Sobic004G297900 Sobic006G172550 Sobic006G172550 Sobic005G073000--Sobic006G172550 Sobic005G073000--Sobic001G238300 Sobic001G238400 Sobic001G238400 Sobic005G073000--Sobic001G238400 Sobic005G073000--Sobic002G425000 Sobic001G304100 Sobic001G304100 Sobic005G073000--Sobic001G304100 Sobic005G073000--Sobic002G261500 Sobic004G292900 Sobic004G292900 Sobic005G073000--Sobic004G292900 Sobic010G194100--Sobic003G417100 Sobic006G256900 Sobic006G256900 Sobic010G194100--Sobic006G256900 Sobic010G194100--Sobic006G274933 Sobic002G185800 Sobic002G185800 Sobic010G194100--Sobic002G185800 Sobic004G262500 Sobic004G262500 Sobic010G194100--Sobic004G262500 Sobic003G404600 Sobic003G404600 Sobic010G194100--Sobic003G404600 Sobic001G176400 Sobic001G176400 Sobic010G194100--Sobic001G176400 Sobic003G280400 Sobic003G280400 Sobic010G194100--Sobic003G280400 Sobic006G230300 Sobic006G230300 Sobic010G194100--Sobic006G230300 Sobic002G261500--Sobic001G238300 Sobic002G261500--Sobic002G425000 Sobic002G261500--Sobic004G297900 Sobic010G212500 Sobic010G212500 Sobic002G261500--Sobic010G212500 Sobic002G042200 Sobic002G042200 Sobic002G261500--Sobic002G042200 Sobic003G053400 Sobic003G053400 Sobic002G261500--Sobic003G053400 Sobic002G261500--Sobic007G050200 Sobic001G379400 Sobic001G379400 Sobic002G261500--Sobic001G379400 Sobic002G261500--Sobic006G260200 Sobic006G172601--Sobic001G238300 Sobic006G172601--Sobic007G090469 Sobic001G238200 Sobic001G238200 Sobic006G172601--Sobic001G238200 Sobic006G172601--Sobic006G172550 Sobic006G225500 Sobic006G225500 Sobic006G172601--Sobic006G225500 Sobic006G172601--Sobic004G297900 Sobic006G172601--Sobic002G261500 Sobic001G300500 Sobic001G300500 Sobic006G172601--Sobic001G300500 Sobic006G172601--Sobic003G140700 Sobic004G297900--Sobic003G311800 Sobic008G009400 Sobic008G009400 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic004G297900--Sobic001G300500 Sobic009G109000 Sobic009G109000 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 Sobic003G417100--Sobic002G042200 Sobic003G215200 Sobic003G215200 Sobic003G417100--Sobic003G215200 Sobic003G417100--Sobic010G194100 Sobic003G417100--Sobic006G274933 Sobic006G197100 Sobic006G197100 Sobic003G417100--Sobic006G197100 Sobic003G417100--Sobic003G140700 Sobic003G417100--Sobic007G050200 Sobic003G228600 Sobic003G228600 Sobic003G417100--Sobic003G228600 Sobic002G216100 Sobic002G216100 Sobic003G417100--Sobic002G216100 Sobic002G183700 Sobic002G183700 Sobic006G274933--Sobic002G183700 Sobic006G274933--Sobic003G311800 Sobic003G269600 Sobic003G269600 Sobic006G274933--Sobic003G269600 Sobic006G274933--Sobic003G140700 Sobic002G361200 Sobic002G361200 Sobic006G274933--Sobic002G361200 Sobic001G062500 Sobic001G062500 Sobic006G274933--Sobic001G062500 Sobic003G399600 Sobic003G399600 Sobic006G274933--Sobic003G399600 Sobic006G274933--Sobic006G225500 Sobic003G121100 Sobic003G121100 Sobic006G274933--Sobic003G121100
Octagon: transcription factors


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