Gene annotation
Transcriptome id Sobic.002G248900.1,Sobic.002G248900.2
Synonym Sb02g028490
Functional annotation expressed protein
UniProt C5X4G5
Pfam -
Panther DB PTHR35715 PTHR35715:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17350 : -
RAP-DB (Rice) LOC_Os09g31466.1 : expressed protein
MaizeGDB (Corn) Zm00025a047460 , Zm00025a005116 , Zm00025a014220
Brachypodium KQJ90774 , KQJ98944
Barley HORVU7Hr1G051030.4 , HORVU5Hr1G073560.2 , HORVU5Hr1G073560.1 , HORVU7Hr1G051030.12 , HORVU7Hr1G051030.14
Wheat TraesCS7A02G248000 , TraesCS7D02G246800 , TraesCS5B02G266500 , TraesCS5A02G266900 , TraesCS5D02G274800 , TraesCS7B02G143500
Populus -


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cDNA sequences
Sobic.002G248900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
2 Sobic.005G132200 expressed protein -
3 Sobic.003G354600 csAtPR5, putative, expressed -
4 Sobic.002G294500 OsRCI2-11 - Hydrophobic protein OSR8, expressed -
5 Sobic.010G071100 expressed protein -
6 Sobic.002G394400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G386300 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.010G240900 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
9 Sobic.002G273300 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
10 Sobic.006G169800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
11 Sobic.004G343500 OsCttP2 - Putative C-terminal processing peptidase homologue, expressed -
12 Sobic.002G247000 expressed protein -
13 Sobic.003G028900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.001G095000 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
15 Sobic.001G278800 down-regulated TF in developmental senescence(PubMedID : 27586543)@homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
16 Sobic.007G128500 expressed protein -
17 Sobic.001G239500 starch synthase, putative, expressed K00703: starch synthase
18 Sobic.002G077100 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
19 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
20 Sobic.003G389700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G248900 Sobic002G248900 Sobic008G168300 Sobic008G168300 Sobic002G248900--Sobic008G168300 Sobic005G132200 Sobic005G132200 Sobic002G248900--Sobic005G132200 Sobic003G354600 Sobic003G354600 Sobic002G248900--Sobic003G354600 Sobic002G294500 Sobic002G294500 Sobic002G248900--Sobic002G294500 Sobic010G071100 Sobic010G071100 Sobic002G248900--Sobic010G071100 Sobic002G394400 Sobic002G394400 Sobic002G248900--Sobic002G394400 Sobic001G386300 Sobic001G386300 Sobic002G248900--Sobic001G386300 Sobic010G240900 Sobic010G240900 Sobic002G248900--Sobic010G240900 Sobic002G273300 Sobic002G273300 Sobic002G248900--Sobic002G273300 Sobic004G355700 Sobic004G355700 Sobic008G168300--Sobic004G355700 Sobic001G017300 Sobic001G017300 Sobic008G168300--Sobic001G017300 Sobic002G121600 Sobic002G121600 Sobic008G168300--Sobic002G121600 Sobic005G045000 Sobic005G045000 Sobic008G168300--Sobic005G045000 Sobic003G229300 Sobic003G229300 Sobic008G168300--Sobic003G229300 Sobic001G468700 Sobic001G468700 Sobic008G168300--Sobic001G468700 Sobic010G085100 Sobic010G085100 Sobic008G168300--Sobic010G085100 Sobic001G239500 Sobic001G239500 Sobic008G168300--Sobic001G239500 Sobic001G514800 Sobic001G514800 Sobic008G168300--Sobic001G514800 Sobic006G173600 Sobic006G173600 Sobic005G132200--Sobic006G173600 Sobic005G132200--Sobic008G168300 Sobic001G303200 Sobic001G303200 Sobic005G132200--Sobic001G303200 Sobic004G178100 Sobic004G178100 Sobic005G132200--Sobic004G178100 Sobic003G219200 Sobic003G219200 Sobic005G132200--Sobic003G219200 Sobic006G158100 Sobic006G158100 Sobic005G132200--Sobic006G158100 Sobic003G345500 Sobic003G345500 Sobic005G132200--Sobic003G345500 Sobic006G120500 Sobic006G120500 Sobic005G132200--Sobic006G120500 Sobic005G132200--Sobic010G085100 Sobic001G136800 Sobic001G136800 Sobic003G354600--Sobic001G136800 Sobic003G119600 Sobic003G119600 Sobic003G354600--Sobic003G119600 Sobic002G305000 Sobic002G305000 Sobic003G354600--Sobic002G305000 Sobic004G054100 Sobic004G054100 Sobic003G354600--Sobic004G054100 Sobic001G355800 Sobic001G355800 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic009G201300 Sobic009G201300 Sobic003G354600--Sobic009G201300 Sobic002G181600 Sobic002G181600 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800 Sobic002G214400 Sobic002G214400 Sobic002G294500--Sobic002G214400 Sobic001G031100 Sobic001G031100 Sobic002G294500--Sobic001G031100 Sobic003G341400 Sobic003G341400 Sobic002G294500--Sobic003G341400 Sobic003G369900 Sobic003G369900 Sobic002G294500--Sobic003G369900 Sobic001G541100 Sobic001G541100 Sobic002G294500--Sobic001G541100 Sobic002G294500--Sobic001G386300 Sobic002G294500--Sobic010G240900 Sobic007G033800 Sobic007G033800 Sobic002G294500--Sobic007G033800 Sobic009G205200 Sobic009G205200 Sobic002G294500--Sobic009G205200 Sobic008G116700 Sobic008G116700 Sobic010G071100--Sobic008G116700 Sobic004G172500 Sobic004G172500 Sobic010G071100--Sobic004G172500 Sobic007G087000 Sobic007G087000 Sobic010G071100--Sobic007G087000 Sobic001G095000 Sobic001G095000 Sobic010G071100--Sobic001G095000 Sobic004G198600 Sobic004G198600 Sobic010G071100--Sobic004G198600 Sobic001G237600 Sobic001G237600 Sobic010G071100--Sobic001G237600 Sobic009G107300 Sobic009G107300 Sobic010G071100--Sobic009G107300 Sobic010G186100 Sobic010G186100 Sobic010G071100--Sobic010G186100 Sobic003G032400 Sobic003G032400 Sobic010G071100--Sobic003G032400 Sobic001G153200 Sobic001G153200 Sobic002G394400--Sobic001G153200 Sobic001G207700 Sobic001G207700 Sobic002G394400--Sobic001G207700 Sobic001G463000 Sobic001G463000 Sobic002G394400--Sobic001G463000 Sobic003G389700 Sobic003G389700 Sobic002G394400--Sobic003G389700 Sobic001G421300 Sobic001G421300 Sobic002G394400--Sobic001G421300 Sobic001G421900 Sobic001G421900 Sobic002G394400--Sobic001G421900 Sobic002G394400--Sobic002G294500 Sobic001G472600 Sobic001G472600 Sobic002G394400--Sobic001G472600 Sobic003G269200 Sobic003G269200 Sobic002G394400--Sobic003G269200 Sobic002G054300 Sobic002G054300 Sobic001G386300--Sobic002G054300 Sobic003G121300 Sobic003G121300 Sobic001G386300--Sobic003G121300 Sobic004G210800 Sobic004G210800 Sobic001G386300--Sobic004G210800 Sobic001G080700 Sobic001G080700 Sobic001G386300--Sobic001G080700 Sobic001G386300--Sobic001G031100 Sobic001G332500 Sobic001G332500 Sobic001G386300--Sobic001G332500 Sobic003G316700 Sobic003G316700 Sobic001G386300--Sobic003G316700 Sobic010G029900 Sobic010G029900 Sobic001G386300--Sobic010G029900 Sobic002G126500 Sobic002G126500 Sobic001G386300--Sobic002G126500 Sobic007G207400 Sobic007G207400 Sobic010G240900--Sobic007G207400 Sobic004G041500 Sobic004G041500 Sobic010G240900--Sobic004G041500 Sobic004G117900 Sobic004G117900 Sobic010G240900--Sobic004G117900 Sobic001G297500 Sobic001G297500 Sobic010G240900--Sobic001G297500 Sobic010G240900--Sobic003G341400 Sobic001G046200 Sobic001G046200 Sobic010G240900--Sobic001G046200 Sobic003G131400 Sobic003G131400 Sobic010G240900--Sobic003G131400 Sobic001G492300 Sobic001G492300 Sobic010G240900--Sobic001G492300 Sobic010G240900--Sobic009G205200 Sobic004G343500 Sobic004G343500 Sobic002G273300--Sobic004G343500 Sobic007G047400 Sobic007G047400 Sobic002G273300--Sobic007G047400 Sobic009G249600 Sobic009G249600 Sobic002G273300--Sobic009G249600 Sobic002G273300--Sobic001G239500 Sobic001G305600 Sobic001G305600 Sobic002G273300--Sobic001G305600 Sobic003G004200 Sobic003G004200 Sobic002G273300--Sobic003G004200 Sobic004G351700 Sobic004G351700 Sobic002G273300--Sobic004G351700 Sobic009G054900 Sobic009G054900 Sobic002G273300--Sobic009G054900 Sobic003G009700 Sobic003G009700 Sobic002G273300--Sobic003G009700
Octagon: transcription factors


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