Gene annotation
Transcriptome id Sobic.001G278800.1
Synonym Sb01g027430, HAT22
Functional annotation down-regulated TF in developmental senescence (PubMedID : 27586543)
homeobox associated leucine zipper, putative, expressed
UniProt C5WQI4
Pfam PF02183 PF00046
Panther DB PTHR24326 PTHR24326:SF227
NCBI CDD -
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT4G37790 : Homeobox-leucine zipper protein family
RAP-DB (Rice) LOC_Os10g01470.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a005382 , Zm00025a003621 , Zm00025a031666
Brachypodium KQJ96197
Barley -
Wheat TraesCS3D02G009700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G354600 csAtPR5, putative, expressed -
2 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.007G201500 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
4 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
5 Sobic.007G126400 CPuORF27 - conserved peptide uORF-containing transcript, expressed K09338: homeobox-leucine zipper protein
6 Sobic.003G418100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
7 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
8 Sobic.003G262200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
9 Sobic.004G054100 protein-O-fucosyltransferase 1, putative, expressed -
10 Sobic.006G222600 AT hook motif family protein, expressed -
11 Sobic.001G305600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
12 Sobic.002G376600 paramyosin, putative, expressed -
13 Sobic.006G205100 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.003G392900 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
15 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
16 Sobic.010G210500 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
17 Sobic.004G130932 - -
18 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
19 Sobic.004G122600 VHS and GAT domain containing protein, expressed -
20 Sobic.002G151300 - -


Gene co-expression network
sample Sobic001G278800 Sobic001G278800 Sobic003G354600 Sobic003G354600 Sobic001G278800--Sobic003G354600 Sobic003G119600 Sobic003G119600 Sobic001G278800--Sobic003G119600 Sobic007G201500 Sobic007G201500 Sobic001G278800--Sobic007G201500 Sobic002G305000 Sobic002G305000 Sobic001G278800--Sobic002G305000 Sobic007G126400 Sobic007G126400 Sobic001G278800--Sobic007G126400 Sobic003G418100 Sobic003G418100 Sobic001G278800--Sobic003G418100 Sobic003G229300 Sobic003G229300 Sobic001G278800--Sobic003G229300 Sobic003G262200 Sobic003G262200 Sobic001G278800--Sobic003G262200 Sobic004G054100 Sobic004G054100 Sobic001G278800--Sobic004G054100 Sobic001G136800 Sobic001G136800 Sobic003G354600--Sobic001G136800 Sobic003G354600--Sobic003G119600 Sobic003G354600--Sobic002G305000 Sobic003G354600--Sobic004G054100 Sobic001G355800 Sobic001G355800 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic009G201300 Sobic009G201300 Sobic003G354600--Sobic009G201300 Sobic002G181600 Sobic002G181600 Sobic003G354600--Sobic002G181600 Sobic003G220800 Sobic003G220800 Sobic003G354600--Sobic003G220800 Sobic003G119600--Sobic009G201300 Sobic001G439300 Sobic001G439300 Sobic003G119600--Sobic001G439300 Sobic002G325300 Sobic002G325300 Sobic003G119600--Sobic002G325300 Sobic004G244900 Sobic004G244900 Sobic003G119600--Sobic004G244900 Sobic002G257750 Sobic002G257750 Sobic003G119600--Sobic002G257750 Sobic005G106600 Sobic005G106600 Sobic003G119600--Sobic005G106600 Sobic004G356700 Sobic004G356700 Sobic003G119600--Sobic004G356700 Sobic003G253600 Sobic003G253600 Sobic003G119600--Sobic003G253600 Sobic003G119600--Sobic003G354600 Sobic001G073500 Sobic001G073500 Sobic007G201500--Sobic001G073500 Sobic006G222600 Sobic006G222600 Sobic007G201500--Sobic006G222600 Sobic007G201500--Sobic010G210500 Sobic001G375100 Sobic001G375100 Sobic007G201500--Sobic001G375100 Sobic010G205100 Sobic010G205100 Sobic007G201500--Sobic010G205100 Sobic007G201500--Sobic002G305000 Sobic010G176200 Sobic010G176200 Sobic007G201500--Sobic010G176200 Sobic007G201500--Sobic003G354600 Sobic008G130000 Sobic008G130000 Sobic007G201500--Sobic008G130000 Sobic002G359400 Sobic002G359400 Sobic002G305000--Sobic002G359400 Sobic002G305000--Sobic009G201300 Sobic002G305000--Sobic003G354600 Sobic010G147100 Sobic010G147100 Sobic002G305000--Sobic010G147100 Sobic002G305000--Sobic001G355800 Sobic006G175800 Sobic006G175800 Sobic002G305000--Sobic006G175800 Sobic001G303100 Sobic001G303100 Sobic002G305000--Sobic001G303100 Sobic010G074300 Sobic010G074300 Sobic002G305000--Sobic010G074300 Sobic002G305000--Sobic003G220800 Sobic005G188600 Sobic005G188600 Sobic007G126400--Sobic005G188600 Sobic001G484400 Sobic001G484400 Sobic007G126400--Sobic001G484400 Sobic003G003600 Sobic003G003600 Sobic007G126400--Sobic003G003600 Sobic008G094000 Sobic008G094000 Sobic007G126400--Sobic008G094000 Sobic001G073900 Sobic001G073900 Sobic007G126400--Sobic001G073900 Sobic010G099700 Sobic010G099700 Sobic007G126400--Sobic010G099700 Sobic005G110502 Sobic005G110502 Sobic007G126400--Sobic005G110502 Sobic008G115900 Sobic008G115900 Sobic007G126400--Sobic008G115900 Sobic001G065600 Sobic001G065600 Sobic007G126400--Sobic001G065600 Sobic006G064100 Sobic006G064100 Sobic003G418100--Sobic006G064100 Sobic003G418100--Sobic010G205100 Sobic001G305600 Sobic001G305600 Sobic003G418100--Sobic001G305600 Sobic008G001900 Sobic008G001900 Sobic003G418100--Sobic008G001900 Sobic003G418100--Sobic002G305000 Sobic003G011300 Sobic003G011300 Sobic003G418100--Sobic003G011300 Sobic001G531500 Sobic001G531500 Sobic003G418100--Sobic001G531500 Sobic003G418100--Sobic003G354600 Sobic003G418100--Sobic001G073900 Sobic003G191700 Sobic003G191700 Sobic003G229300--Sobic003G191700 Sobic003G229300--Sobic010G176200 Sobic006G133900 Sobic006G133900 Sobic003G229300--Sobic006G133900 Sobic004G042200 Sobic004G042200 Sobic003G229300--Sobic004G042200 Sobic001G169900 Sobic001G169900 Sobic003G229300--Sobic001G169900 Sobic003G229300--Sobic008G115900 Sobic007G198300 Sobic007G198300 Sobic003G229300--Sobic007G198300 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic003G262200--Sobic003G229300 Sobic006G185100 Sobic006G185100 Sobic003G262200--Sobic006G185100 Sobic004G193700 Sobic004G193700 Sobic003G262200--Sobic004G193700 Sobic003G262200--Sobic003G119600 Sobic003G262200--Sobic008G115900 Sobic002G091600 Sobic002G091600 Sobic003G262200--Sobic002G091600 Sobic003G262200--Sobic003G253600 Sobic003G155100 Sobic003G155100 Sobic003G262200--Sobic003G155100 Sobic003G262200--Sobic001G355800 Sobic001G031100 Sobic001G031100 Sobic004G054100--Sobic001G031100 Sobic004G054100--Sobic003G354600 Sobic009G084000 Sobic009G084000 Sobic004G054100--Sobic009G084000 Sobic010G020400 Sobic010G020400 Sobic004G054100--Sobic010G020400 Sobic004G054100--Sobic002G359400 Sobic001G007000 Sobic001G007000 Sobic004G054100--Sobic001G007000 Sobic002G047700 Sobic002G047700 Sobic004G054100--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic004G054100--Sobic006G180000 Sobic004G054100--Sobic001G355800
Octagon: transcription factors


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