Gene annotation
Transcriptome id Sobic.002G151300.2,Sobic.002G151300.4,Sobic.002G151300.3,Sobic.002G151300.1
Synonym
Functional annotation -
UniProt A0A1W0W433 , A0A1B6QBH3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G151300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G040350 - -
2 Sobic.001G212300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myosin-2 heavy chain, non muscle, putative, expressed -
3 Sobic.003G262200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
4 Sobic.002G358500 - -
5 Sobic.001G456900 expressed protein -
6 Sobic.002G257750 - -
7 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
8 Sobic.003G033200 F-box/LRR-repeat protein, putative, expressed -
9 Sobic.008G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
10 Sobic.004G355700 C2 domain containing protein, putative, expressed -
11 Sobic.002G042800 expressed protein -
12 Sobic.004G258700 PHD-finger family protein, expressed -
13 Sobic.005G167700 protein phosphatase 2C, putative, expressed -
14 Sobic.009G132700 - -
15 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.002G145101 - -
17 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
18 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
19 Sobic.002G344000 expressed protein -
20 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4


Gene co-expression network
sample Sobic002G151300 Sobic002G151300 Sobic004G040350 Sobic004G040350 Sobic002G151300--Sobic004G040350 Sobic001G212300 Sobic001G212300 Sobic002G151300--Sobic001G212300 Sobic003G262200 Sobic003G262200 Sobic002G151300--Sobic003G262200 Sobic002G358500 Sobic002G358500 Sobic002G151300--Sobic002G358500 Sobic001G456900 Sobic001G456900 Sobic002G151300--Sobic001G456900 Sobic002G257750 Sobic002G257750 Sobic002G151300--Sobic002G257750 Sobic003G398700 Sobic003G398700 Sobic002G151300--Sobic003G398700 Sobic003G033200 Sobic003G033200 Sobic002G151300--Sobic003G033200 Sobic008G168300 Sobic008G168300 Sobic002G151300--Sobic008G168300 Sobic004G040350--Sobic001G456900 Sobic007G161300 Sobic007G161300 Sobic004G040350--Sobic007G161300 Sobic007G146100 Sobic007G146100 Sobic004G040350--Sobic007G146100 Sobic010G139000 Sobic010G139000 Sobic004G040350--Sobic010G139000 Sobic002G180666 Sobic002G180666 Sobic004G040350--Sobic002G180666 Sobic008G028700 Sobic008G028700 Sobic004G040350--Sobic008G028700 Sobic003G241100 Sobic003G241100 Sobic004G040350--Sobic003G241100 Sobic002G145101 Sobic002G145101 Sobic004G040350--Sobic002G145101 Sobic004G040350--Sobic002G151300 Sobic008G151100 Sobic008G151100 Sobic001G212300--Sobic008G151100 Sobic003G191700 Sobic003G191700 Sobic001G212300--Sobic003G191700 Sobic009G038900 Sobic009G038900 Sobic001G212300--Sobic009G038900 Sobic004G042200 Sobic004G042200 Sobic001G212300--Sobic004G042200 Sobic004G355700 Sobic004G355700 Sobic001G212300--Sobic004G355700 Sobic001G381600 Sobic001G381600 Sobic001G212300--Sobic001G381600 Sobic003G313300 Sobic003G313300 Sobic001G212300--Sobic003G313300 Sobic007G198300 Sobic007G198300 Sobic001G212300--Sobic007G198300 Sobic001G374100 Sobic001G374100 Sobic001G212300--Sobic001G374100 Sobic003G229300 Sobic003G229300 Sobic003G262200--Sobic003G229300 Sobic006G185100 Sobic006G185100 Sobic003G262200--Sobic006G185100 Sobic004G193700 Sobic004G193700 Sobic003G262200--Sobic004G193700 Sobic003G119600 Sobic003G119600 Sobic003G262200--Sobic003G119600 Sobic008G115900 Sobic008G115900 Sobic003G262200--Sobic008G115900 Sobic002G091600 Sobic002G091600 Sobic003G262200--Sobic002G091600 Sobic003G253600 Sobic003G253600 Sobic003G262200--Sobic003G253600 Sobic003G155100 Sobic003G155100 Sobic003G262200--Sobic003G155100 Sobic001G355800 Sobic001G355800 Sobic003G262200--Sobic001G355800 Sobic009G191100 Sobic009G191100 Sobic002G358500--Sobic009G191100 Sobic004G359700 Sobic004G359700 Sobic002G358500--Sobic004G359700 Sobic002G121600 Sobic002G121600 Sobic002G358500--Sobic002G121600 Sobic007G113800 Sobic007G113800 Sobic002G358500--Sobic007G113800 Sobic002G000700 Sobic002G000700 Sobic002G358500--Sobic002G000700 Sobic001G060401 Sobic001G060401 Sobic002G358500--Sobic001G060401 Sobic004G112600 Sobic004G112600 Sobic002G358500--Sobic004G112600 Sobic001G468700 Sobic001G468700 Sobic002G358500--Sobic001G468700 Sobic002G343901 Sobic002G343901 Sobic002G358500--Sobic002G343901 Sobic001G036050 Sobic001G036050 Sobic001G456900--Sobic001G036050 Sobic001G456900--Sobic010G139000 Sobic004G258700 Sobic004G258700 Sobic001G456900--Sobic004G258700 Sobic008G113100 Sobic008G113100 Sobic001G456900--Sobic008G113100 Sobic001G456900--Sobic008G028700 Sobic001G456900--Sobic002G180666 Sobic001G311500 Sobic001G311500 Sobic001G456900--Sobic001G311500 Sobic001G456900--Sobic003G398700 Sobic003G101500 Sobic003G101500 Sobic001G456900--Sobic003G101500 Sobic002G257750--Sobic003G398700 Sobic005G106600 Sobic005G106600 Sobic002G257750--Sobic005G106600 Sobic002G257750--Sobic003G119600 Sobic002G257750--Sobic003G253600 Sobic002G257750--Sobic006G185100 Sobic003G388100 Sobic003G388100 Sobic002G257750--Sobic003G388100 Sobic006G050700 Sobic006G050700 Sobic002G257750--Sobic006G050700 Sobic004G244900 Sobic004G244900 Sobic002G257750--Sobic004G244900 Sobic010G132600 Sobic010G132600 Sobic002G257750--Sobic010G132600 Sobic003G398700--Sobic002G257750 Sobic003G398700--Sobic001G456900 Sobic008G044100 Sobic008G044100 Sobic003G398700--Sobic008G044100 Sobic010G021500 Sobic010G021500 Sobic003G398700--Sobic010G021500 Sobic007G136800 Sobic007G136800 Sobic003G398700--Sobic007G136800 Sobic004G185800 Sobic004G185800 Sobic003G398700--Sobic004G185800 Sobic003G168100 Sobic003G168100 Sobic003G398700--Sobic003G168100 Sobic003G398700--Sobic008G113100 Sobic010G126000 Sobic010G126000 Sobic003G398700--Sobic010G126000 Sobic003G033200--Sobic001G311500 Sobic003G033200--Sobic001G456900 Sobic001G384300 Sobic001G384300 Sobic003G033200--Sobic001G384300 Sobic003G033200--Sobic002G145101 Sobic001G356500 Sobic001G356500 Sobic003G033200--Sobic001G356500 Sobic003G033200--Sobic004G258700 Sobic008G162900 Sobic008G162900 Sobic003G033200--Sobic008G162900 Sobic005G013200 Sobic005G013200 Sobic003G033200--Sobic005G013200 Sobic001G228701 Sobic001G228701 Sobic003G033200--Sobic001G228701 Sobic008G168300--Sobic004G355700 Sobic001G017300 Sobic001G017300 Sobic008G168300--Sobic001G017300 Sobic008G168300--Sobic002G121600 Sobic005G045000 Sobic005G045000 Sobic008G168300--Sobic005G045000 Sobic008G168300--Sobic003G229300 Sobic008G168300--Sobic001G468700 Sobic010G085100 Sobic010G085100 Sobic008G168300--Sobic010G085100 Sobic001G239500 Sobic001G239500 Sobic008G168300--Sobic001G239500 Sobic001G514800 Sobic001G514800 Sobic008G168300--Sobic001G514800
Octagon: transcription factors


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