Gene annotation
Transcriptome id Sobic.005G132200.2,Sobic.005G132200.1
Synonym Sb05g019560, CRL
Functional annotation expressed protein
UniProt C5Y393 , A0A1Z5RIE5
Pfam PF06206
Panther DB PTHR35137 PTHR35137:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0017009; protein-phycocyanobilin linkage


Orthologs (automatic annotation)
TAIR AT5G51020 : crumpled leaf
RAP-DB (Rice) LOC_Os11g32160.1 : expressed protein
MaizeGDB (Corn) Zm00025a029828
Brachypodium KQJ88387
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G132200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
2 Sobic.008G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
3 Sobic.001G303200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
4 Sobic.004G178100 uncharacterized oxidoreductase yoxD, putative, expressed -
5 Sobic.003G219200 MEE18, putative, expressed -
6 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
7 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
8 Sobic.006G120500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
9 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
10 Sobic.001G333500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
11 Sobic.002G091600 methyltransferase, putative, expressed -
12 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
13 Sobic.002G077100 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
14 Sobic.002G239300 OsFBX338 - F-box domain containing protein, expressed -
15 Sobic.001G514800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
16 Sobic.007G171400 low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed K01104: protein-tyrosine phosphatase
17 Sobic.001G468700 expressed protein -
18 Sobic.008G006200 macrophage migration inhibitory factor, putative, expressed -
19 Sobic.007G136200 expressed protein -
20 Sobic.002G257750 - -


Gene co-expression network
sample Sobic005G132200 Sobic005G132200 Sobic006G173600 Sobic006G173600 Sobic005G132200--Sobic006G173600 Sobic008G168300 Sobic008G168300 Sobic005G132200--Sobic008G168300 Sobic001G303200 Sobic001G303200 Sobic005G132200--Sobic001G303200 Sobic004G178100 Sobic004G178100 Sobic005G132200--Sobic004G178100 Sobic003G219200 Sobic003G219200 Sobic005G132200--Sobic003G219200 Sobic006G158100 Sobic006G158100 Sobic005G132200--Sobic006G158100 Sobic003G345500 Sobic003G345500 Sobic005G132200--Sobic003G345500 Sobic006G120500 Sobic006G120500 Sobic005G132200--Sobic006G120500 Sobic010G085100 Sobic010G085100 Sobic005G132200--Sobic010G085100 Sobic007G150100 Sobic007G150100 Sobic006G173600--Sobic007G150100 Sobic003G110800 Sobic003G110800 Sobic006G173600--Sobic003G110800 Sobic008G115900 Sobic008G115900 Sobic006G173600--Sobic008G115900 Sobic006G173600--Sobic003G219200 Sobic006G173600--Sobic006G158100 Sobic006G173600--Sobic004G178100 Sobic007G136200 Sobic007G136200 Sobic006G173600--Sobic007G136200 SobicK031800 SobicK031800 Sobic006G173600--SobicK031800 Sobic001G072700 Sobic001G072700 Sobic006G173600--Sobic001G072700 Sobic004G355700 Sobic004G355700 Sobic008G168300--Sobic004G355700 Sobic001G017300 Sobic001G017300 Sobic008G168300--Sobic001G017300 Sobic002G121600 Sobic002G121600 Sobic008G168300--Sobic002G121600 Sobic005G045000 Sobic005G045000 Sobic008G168300--Sobic005G045000 Sobic003G229300 Sobic003G229300 Sobic008G168300--Sobic003G229300 Sobic001G468700 Sobic001G468700 Sobic008G168300--Sobic001G468700 Sobic008G168300--Sobic010G085100 Sobic001G239500 Sobic001G239500 Sobic008G168300--Sobic001G239500 Sobic001G514800 Sobic001G514800 Sobic008G168300--Sobic001G514800 Sobic001G283100 Sobic001G283100 Sobic001G303200--Sobic001G283100 Sobic002G382700 Sobic002G382700 Sobic001G303200--Sobic002G382700 Sobic001G333800 Sobic001G333800 Sobic001G303200--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic001G303200--Sobic001G207800 Sobic006G102000 Sobic006G102000 Sobic001G303200--Sobic006G102000 Sobic007G108900 Sobic007G108900 Sobic001G303200--Sobic007G108900 Sobic006G221000 Sobic006G221000 Sobic001G303200--Sobic006G221000 Sobic006G090100 Sobic006G090100 Sobic001G303200--Sobic006G090100 Sobic003G094100 Sobic003G094100 Sobic001G303200--Sobic003G094100 Sobic002G000600 Sobic002G000600 Sobic004G178100--Sobic002G000600 Sobic002G020400 Sobic002G020400 Sobic004G178100--Sobic002G020400 Sobic010G043800 Sobic010G043800 Sobic004G178100--Sobic010G043800 Sobic004G178100--Sobic006G173600 Sobic004G178100--Sobic006G158100 Sobic001G198100 Sobic001G198100 Sobic004G178100--Sobic001G198100 Sobic003G247400 Sobic003G247400 Sobic004G178100--Sobic003G247400 Sobic004G337400 Sobic004G337400 Sobic004G178100--Sobic004G337400 Sobic001G516901 Sobic001G516901 Sobic004G178100--Sobic001G516901 Sobic003G219200--SobicK031800 Sobic010G035400 Sobic010G035400 Sobic003G219200--Sobic010G035400 Sobic002G275300 Sobic002G275300 Sobic003G219200--Sobic002G275300 Sobic003G219200--Sobic006G102000 Sobic009G237100 Sobic009G237100 Sobic003G219200--Sobic009G237100 Sobic007G103400 Sobic007G103400 Sobic003G219200--Sobic007G103400 Sobic009G237000 Sobic009G237000 Sobic003G219200--Sobic009G237000 Sobic006G207800 Sobic006G207800 Sobic003G219200--Sobic006G207800 Sobic001G100000 Sobic001G100000 Sobic003G219200--Sobic001G100000 Sobic006G158100--Sobic007G136200 Sobic006G158100--Sobic001G017300 Sobic001G258200 Sobic001G258200 Sobic006G158100--Sobic001G258200 Sobic001G504400 Sobic001G504400 Sobic006G158100--Sobic001G504400 Sobic006G158100--Sobic003G094100 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic001G169900 Sobic001G169900 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900 Sobic009G062400 Sobic009G062400 Sobic003G345500--Sobic009G062400 Sobic003G345500--Sobic001G504400 Sobic008G006100 Sobic008G006100 Sobic003G345500--Sobic008G006100 Sobic009G207900 Sobic009G207900 Sobic003G345500--Sobic009G207900 Sobic003G345500--Sobic007G103400 Sobic007G058001 Sobic007G058001 Sobic003G345500--Sobic007G058001 Sobic003G345500--Sobic006G102000 Sobic002G005600 Sobic002G005600 Sobic003G345500--Sobic002G005600 Sobic003G345500--Sobic009G237000 Sobic004G317500 Sobic004G317500 Sobic006G120500--Sobic004G317500 Sobic008G033200 Sobic008G033200 Sobic006G120500--Sobic008G033200 Sobic002G324500 Sobic002G324500 Sobic006G120500--Sobic002G324500 Sobic005G001700 Sobic005G001700 Sobic006G120500--Sobic005G001700 Sobic004G027600 Sobic004G027600 Sobic006G120500--Sobic004G027600 Sobic002G403600 Sobic002G403600 Sobic006G120500--Sobic002G403600 Sobic003G036200 Sobic003G036200 Sobic006G120500--Sobic003G036200 Sobic006G064100 Sobic006G064100 Sobic006G120500--Sobic006G064100 Sobic006G120500--Sobic010G085100 Sobic005G101200 Sobic005G101200 Sobic010G085100--Sobic005G101200 Sobic010G085100--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic010G085100--Sobic007G105500 Sobic002G404800 Sobic002G404800 Sobic010G085100--Sobic002G404800 Sobic004G215800 Sobic004G215800 Sobic010G085100--Sobic004G215800 Sobic008G140200 Sobic008G140200 Sobic010G085100--Sobic008G140200 Sobic010G085100--Sobic003G036200 Sobic008G033000 Sobic008G033000 Sobic010G085100--Sobic008G033000 Sobic004G154200 Sobic004G154200 Sobic010G085100--Sobic004G154200
Octagon: transcription factors


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