Gene annotation
Transcriptome id Sobic.002G260000.2,Sobic.002G260000.1
Synonym Sb02g029500
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QDJ0 , A0A1B6QDJ7
Pfam PF03982 PF12146
Panther DB PTHR22753 PTHR22753:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G41120 : Esterase/lipase/thioesterase family protein
RAP-DB (Rice) LOC_Os09g33530.1 : expressed protein
MaizeGDB (Corn) Zm00025a047601
Brachypodium PNT64901 , PNT64903 , PNT64902 , PNT64905 , PNT64904 , PNT64906 , KQJ90953 , KQJ90952
Barley HORVU5Hr1G077140.1 , HORVU5Hr1G077140.2 , HORVU5Hr1G077120.10 , HORVU5Hr1G077120.11 , HORVU5Hr1G077120.2 , HORVU5Hr1G077120.3 , HORVU5Hr1G077120.1 , HORVU5Hr1G077120.6 , HORVU5Hr1G077120.7 , HORVU5Hr1G077120.5 , HORVU5Hr1G077120.8 , HORVU5Hr1G077120.9
Wheat TraesCS4D02G364800 , TraesCS5B02G291000 , TraesCS5B02G291100 , TraesCS5A02G291900 , TraesCS5D02G299400 , TraesCS5D02G299300 , TraesCS5D02G299300 , TraesCS5A02G292000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G149200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
2 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.001G273500 leucine-rich repeat receptor-like protein kinase 1, putative, expressed -
4 Sobic.003G252300 universal stress protein domain containing protein, putative, expressed -
5 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
6 Sobic.003G316300 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
7 Sobic.009G200300 expressed protein -
8 Sobic.003G105800 No apical meristem protein, putative, expressed -
9 Sobic.005G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CRP11 - Cysteine-rich family protein precursor, expressed -
10 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
11 Sobic.002G195000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@proline-rich protein 6, putative, expressed -
12 Sobic.005G216000 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
13 Sobic.006G182000 helix-loop-helix DNA-binding protein, putative, expressed -
14 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
15 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
16 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
17 Sobic.010G033800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
18 Sobic.003G087200 nuclease PA3, putative, expressed -
19 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
20 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -


Gene co-expression network
sample Sobic002G260000 Sobic002G260000 Sobic003G149200 Sobic003G149200 Sobic002G260000--Sobic003G149200 Sobic009G161000 Sobic009G161000 Sobic002G260000--Sobic009G161000 Sobic001G273500 Sobic001G273500 Sobic002G260000--Sobic001G273500 Sobic003G252300 Sobic003G252300 Sobic002G260000--Sobic003G252300 Sobic002G085300 Sobic002G085300 Sobic002G260000--Sobic002G085300 Sobic003G316300 Sobic003G316300 Sobic002G260000--Sobic003G316300 Sobic009G200300 Sobic009G200300 Sobic002G260000--Sobic009G200300 Sobic003G105800 Sobic003G105800 Sobic002G260000--Sobic003G105800 Sobic005G016800 Sobic005G016800 Sobic002G260000--Sobic005G016800 Sobic001G322700 Sobic001G322700 Sobic003G149200--Sobic001G322700 Sobic006G091700 Sobic006G091700 Sobic003G149200--Sobic006G091700 Sobic005G215900 Sobic005G215900 Sobic003G149200--Sobic005G215900 Sobic006G030700 Sobic006G030700 Sobic003G149200--Sobic006G030700 Sobic003G149200--Sobic009G161000 Sobic005G216000 Sobic005G216000 Sobic003G149200--Sobic005G216000 Sobic001G249300 Sobic001G249300 Sobic003G149200--Sobic001G249300 Sobic003G087200 Sobic003G087200 Sobic003G149200--Sobic003G087200 Sobic004G101900 Sobic004G101900 Sobic003G149200--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic009G161000--Sobic005G178100 Sobic009G161000--Sobic004G101900 Sobic001G325200 Sobic001G325200 Sobic009G161000--Sobic001G325200 Sobic006G100332 Sobic006G100332 Sobic009G161000--Sobic006G100332 Sobic009G161000--Sobic003G105800 Sobic004G260000 Sobic004G260000 Sobic009G161000--Sobic004G260000 Sobic009G226300 Sobic009G226300 Sobic009G161000--Sobic009G226300 Sobic001G305800 Sobic001G305800 Sobic009G161000--Sobic001G305800 Sobic004G124200 Sobic004G124200 Sobic009G161000--Sobic004G124200 Sobic001G273500--Sobic003G316300 Sobic009G000200 Sobic009G000200 Sobic001G273500--Sobic009G000200 Sobic009G079300 Sobic009G079300 Sobic001G273500--Sobic009G079300 Sobic006G149600 Sobic006G149600 Sobic001G273500--Sobic006G149600 Sobic003G332000 Sobic003G332000 Sobic001G273500--Sobic003G332000 Sobic001G298500 Sobic001G298500 Sobic001G273500--Sobic001G298500 Sobic007G025800 Sobic007G025800 Sobic001G273500--Sobic007G025800 Sobic004G162400 Sobic004G162400 Sobic001G273500--Sobic004G162400 Sobic001G273500--Sobic009G200300 Sobic002G274800 Sobic002G274800 Sobic003G252300--Sobic002G274800 Sobic003G252300--Sobic005G216000 Sobic003G252300--Sobic003G105800 Sobic006G115300 Sobic006G115300 Sobic003G252300--Sobic006G115300 Sobic008G190900 Sobic008G190900 Sobic003G252300--Sobic008G190900 Sobic003G252300--Sobic004G162400 Sobic008G189200 Sobic008G189200 Sobic003G252300--Sobic008G189200 Sobic007G225900 Sobic007G225900 Sobic003G252300--Sobic007G225900 Sobic001G092000 Sobic001G092000 Sobic003G252300--Sobic001G092000 Sobic002G085300--Sobic006G091700 Sobic009G114000 Sobic009G114000 Sobic002G085300--Sobic009G114000 Sobic002G420700 Sobic002G420700 Sobic002G085300--Sobic002G420700 Sobic002G085300--Sobic003G087200 Sobic001G015500 Sobic001G015500 Sobic002G085300--Sobic001G015500 Sobic001G150600 Sobic001G150600 Sobic002G085300--Sobic001G150600 Sobic008G153400 Sobic008G153400 Sobic002G085300--Sobic008G153400 Sobic001G069900 Sobic001G069900 Sobic002G085300--Sobic001G069900 Sobic001G150650 Sobic001G150650 Sobic002G085300--Sobic001G150650 Sobic003G316300--Sobic009G000200 Sobic001G386400 Sobic001G386400 Sobic003G316300--Sobic001G386400 Sobic003G316300--Sobic009G079300 Sobic006G119200 Sobic006G119200 Sobic003G316300--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic003G316300--Sobic009G167700 Sobic003G316300--Sobic001G273500 Sobic004G125900 Sobic004G125900 Sobic003G316300--Sobic004G125900 Sobic003G316300--Sobic001G298500 Sobic003G316300--Sobic009G200300 Sobic004G236600 Sobic004G236600 Sobic009G200300--Sobic004G236600 Sobic009G136100 Sobic009G136100 Sobic009G200300--Sobic009G136100 Sobic009G135100 Sobic009G135100 Sobic009G200300--Sobic009G135100 Sobic009G200300--Sobic003G316300 Sobic005G231900 Sobic005G231900 Sobic009G200300--Sobic005G231900 Sobic002G322900 Sobic002G322900 Sobic009G200300--Sobic002G322900 Sobic004G236550 Sobic004G236550 Sobic009G200300--Sobic004G236550 Sobic009G200300--Sobic009G000200 Sobic009G200300--Sobic007G025800 Sobic003G184900 Sobic003G184900 Sobic003G105800--Sobic003G184900 Sobic008G079300 Sobic008G079300 Sobic003G105800--Sobic008G079300 Sobic004G321800 Sobic004G321800 Sobic003G105800--Sobic004G321800 Sobic003G105800--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic003G105800--Sobic002G304000 Sobic003G105800--Sobic007G225900 Sobic003G105800--Sobic006G100332 Sobic003G105800--Sobic003G087200 Sobic003G105800--Sobic009G226300 Sobic002G381300 Sobic002G381300 Sobic005G016800--Sobic002G381300 Sobic009G236200 Sobic009G236200 Sobic005G016800--Sobic009G236200 Sobic007G125900 Sobic007G125900 Sobic005G016800--Sobic007G125900 Sobic001G156300 Sobic001G156300 Sobic005G016800--Sobic001G156300 Sobic002G355200 Sobic002G355200 Sobic005G016800--Sobic002G355200 Sobic005G016800--Sobic004G236550 Sobic005G016800--Sobic009G079300 Sobic005G016800--Sobic005G231900 Sobic001G151800 Sobic001G151800 Sobic005G016800--Sobic001G151800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.