Gene annotation
Transcriptome id Sobic.002G268200.1
Synonym Sb02g030220, ATFUC1, FUC1
Functional annotation glycosyl hydrolase family 29, putative, expressed
UniProt C5X5H5
Pfam PF01120
Panther DB PTHR10030 PTHR10030:SF25
NCBI CDD -
KEGG Orthology K01206; alpha-L-fucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004560alpha-L-fucosidase activity


Orthologs (automatic annotation)
TAIR AT2G28100 : alpha-L-fucosidase 1
RAP-DB (Rice) LOC_Os09g34920.1 : glycosyl hydrolase family 29, putative, expressed
MaizeGDB (Corn) Zm00025a047696 , Zm00025a014374
Brachypodium KQJ91094
Barley HORVU5Hr1G080110.9 , HORVU5Hr1G080110.8 , HORVU5Hr1G080110.5 , HORVU5Hr1G080110.4 , HORVU5Hr1G080110.7 , HORVU5Hr1G080110.6 , HORVU5Hr1G080110.1 , HORVU5Hr1G080110.3 , HORVU5Hr1G080110.2 , HORVU5Hr1G086390.1 , HORVU5Hr1G086390.2 , HORVU5Hr1G086390.7 , HORVU5Hr1G080110.11 , HORVU5Hr1G080110.10 , HORVU5Hr1G080110.12 , HORVU5Hr1G086390.5 , HORVU5Hr1G086390.4 , HORVU5Hr1G086390.6
Wheat TraesCS2D02G404300 , TraesCS5B02G309700 , TraesCS5A02G309000 , TraesCS5B02G309300 , TraesCS2D02G404300 , TraesCS5D02G316000 , TraesCS5A02G308800
Populus -


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cDNA sequences
Sobic.002G268200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G354900 - -
2 Sobic.004G287500 expressed protein -
3 Sobic.003G145200 expressed protein -
4 Sobic.007G153300 ZOS8-07 - C2H2 zinc finger protein, expressed -
5 Sobic.004G221150 - -
6 Sobic.001G523500 DUF623 domain containing protein, expressed -
7 Sobic.002G287500 RNA recognition motif containing protein, expressed K13154: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
8 Sobic.006G186200 exostosin family domain containing protein, expressed -
9 Sobic.006G163650 - -
10 Sobic.002G282100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
11 Sobic.010G078800 expressed protein -
12 Sobic.001G213200 ZOS10-05 - C2H2 zinc finger protein, expressed -
13 Sobic.004G061600 expressed protein -
14 Sobic.007G206550 - -
15 Sobic.008G136900 expressed protein -
16 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
17 Sobic.007G038900 expressed protein -
18 Sobic.001G298100 Not investigated(PubMedID : 23766026)@Osmolyte biosynthesis(PubMedID : 28620409)@AP2 domain containing protein, expressed -
19 Sobic.008G163800 expressed protein -
20 Sobic.006G155200 TGF-beta receptor, type I/II extracellular region, putative, expressed -


Gene co-expression network
sample Sobic002G268200 Sobic002G268200 Sobic001G354900 Sobic001G354900 Sobic002G268200--Sobic001G354900 Sobic004G287500 Sobic004G287500 Sobic002G268200--Sobic004G287500 Sobic003G145200 Sobic003G145200 Sobic002G268200--Sobic003G145200 Sobic007G153300 Sobic007G153300 Sobic002G268200--Sobic007G153300 Sobic004G221150 Sobic004G221150 Sobic002G268200--Sobic004G221150 Sobic001G523500 Sobic001G523500 Sobic002G268200--Sobic001G523500 Sobic002G287500 Sobic002G287500 Sobic002G268200--Sobic002G287500 Sobic006G186200 Sobic006G186200 Sobic002G268200--Sobic006G186200 Sobic006G163650 Sobic006G163650 Sobic002G268200--Sobic006G163650 Sobic001G213200 Sobic001G213200 Sobic001G354900--Sobic001G213200 Sobic001G075900 Sobic001G075900 Sobic001G354900--Sobic001G075900 Sobic003G073620 Sobic003G073620 Sobic001G354900--Sobic003G073620 Sobic001G536300 Sobic001G536300 Sobic001G354900--Sobic001G536300 Sobic001G354900--Sobic002G268200 Sobic001G354900--Sobic001G523500 Sobic001G084300 Sobic001G084300 Sobic001G354900--Sobic001G084300 Sobic002G202200 Sobic002G202200 Sobic001G354900--Sobic002G202200 Sobic001G354900--Sobic004G221150 Sobic008G163800 Sobic008G163800 Sobic004G287500--Sobic008G163800 Sobic001G180300 Sobic001G180300 Sobic004G287500--Sobic001G180300 Sobic006G108000 Sobic006G108000 Sobic004G287500--Sobic006G108000 Sobic004G236500 Sobic004G236500 Sobic004G287500--Sobic004G236500 Sobic006G187600 Sobic006G187600 Sobic004G287500--Sobic006G187600 Sobic010G068300 Sobic010G068300 Sobic004G287500--Sobic010G068300 Sobic008G031600 Sobic008G031600 Sobic004G287500--Sobic008G031600 Sobic002G284701 Sobic002G284701 Sobic004G287500--Sobic002G284701 Sobic001G422800 Sobic001G422800 Sobic004G287500--Sobic001G422800 Sobic003G145200--Sobic001G536300 Sobic003G145200--Sobic001G354900 Sobic010G275600 Sobic010G275600 Sobic003G145200--Sobic010G275600 Sobic003G145200--Sobic002G268200 Sobic010G078800 Sobic010G078800 Sobic003G145200--Sobic010G078800 Sobic003G350000 Sobic003G350000 Sobic003G145200--Sobic003G350000 Sobic002G299800 Sobic002G299800 Sobic003G145200--Sobic002G299800 Sobic001G037550 Sobic001G037550 Sobic003G145200--Sobic001G037550 Sobic003G145200--Sobic001G075900 Sobic003G359200 Sobic003G359200 Sobic007G153300--Sobic003G359200 Sobic003G406500 Sobic003G406500 Sobic007G153300--Sobic003G406500 Sobic003G006500 Sobic003G006500 Sobic007G153300--Sobic003G006500 Sobic004G061600 Sobic004G061600 Sobic007G153300--Sobic004G061600 Sobic004G156600 Sobic004G156600 Sobic007G153300--Sobic004G156600 Sobic003G390300 Sobic003G390300 Sobic007G153300--Sobic003G390300 Sobic007G153300--Sobic008G163800 Sobic001G062700 Sobic001G062700 Sobic007G153300--Sobic001G062700 Sobic008G136900 Sobic008G136900 Sobic007G153300--Sobic008G136900 Sobic008G134000 Sobic008G134000 Sobic004G221150--Sobic008G134000 Sobic004G108900 Sobic004G108900 Sobic004G221150--Sobic004G108900 Sobic008G144100 Sobic008G144100 Sobic004G221150--Sobic008G144100 Sobic001G399501 Sobic001G399501 Sobic004G221150--Sobic001G399501 Sobic009G223700 Sobic009G223700 Sobic004G221150--Sobic009G223700 Sobic001G179680 Sobic001G179680 Sobic004G221150--Sobic001G179680 Sobic004G089700 Sobic004G089700 Sobic004G221150--Sobic004G089700 Sobic002G256500 Sobic002G256500 Sobic004G221150--Sobic002G256500 Sobic006G169300 Sobic006G169300 Sobic004G221150--Sobic006G169300 Sobic007G206550 Sobic007G206550 Sobic001G523500--Sobic007G206550 Sobic006G075700 Sobic006G075700 Sobic001G523500--Sobic006G075700 Sobic001G104400 Sobic001G104400 Sobic001G523500--Sobic001G104400 Sobic007G157550 Sobic007G157550 Sobic001G523500--Sobic007G157550 Sobic001G523500--Sobic001G179680 Sobic004G347866 Sobic004G347866 Sobic001G523500--Sobic004G347866 Sobic003G265300 Sobic003G265300 Sobic001G523500--Sobic003G265300 Sobic001G523500--Sobic004G089700 Sobic001G494150 Sobic001G494150 Sobic001G523500--Sobic001G494150 Sobic007G038900 Sobic007G038900 Sobic002G287500--Sobic007G038900 Sobic004G063750 Sobic004G063750 Sobic002G287500--Sobic004G063750 Sobic009G088401 Sobic009G088401 Sobic002G287500--Sobic009G088401 Sobic006G273500 Sobic006G273500 Sobic002G287500--Sobic006G273500 Sobic007G072400 Sobic007G072400 Sobic002G287500--Sobic007G072400 Sobic002G173600 Sobic002G173600 Sobic002G287500--Sobic002G173600 Sobic008G119200 Sobic008G119200 Sobic002G287500--Sobic008G119200 Sobic002G058600 Sobic002G058600 Sobic002G287500--Sobic002G058600 Sobic009G187500 Sobic009G187500 Sobic002G287500--Sobic009G187500 Sobic006G186200--Sobic006G273500 Sobic006G186200--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic006G186200--Sobic004G107400 Sobic006G186200--Sobic003G390300 Sobic010G014900 Sobic010G014900 Sobic006G186200--Sobic010G014900 Sobic007G158400 Sobic007G158400 Sobic006G186200--Sobic007G158400 Sobic006G186200--Sobic004G156600 Sobic003G290700 Sobic003G290700 Sobic006G186200--Sobic003G290700 Sobic001G137200 Sobic001G137200 Sobic006G186200--Sobic001G137200 Sobic007G139000 Sobic007G139000 Sobic006G163650--Sobic007G139000 Sobic006G163650--Sobic010G014900 Sobic006G163650--Sobic004G107400 Sobic010G152700 Sobic010G152700 Sobic006G163650--Sobic010G152700 Sobic003G191800 Sobic003G191800 Sobic006G163650--Sobic003G191800 Sobic006G163650--Sobic003G359200 Sobic006G163650--Sobic007G153300 Sobic005G102200 Sobic005G102200 Sobic006G163650--Sobic005G102200 Sobic006G163650--Sobic007G158400
Octagon: transcription factors


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