Gene annotation
Transcriptome id Sobic.002G287900.1
Synonym
Functional annotation -
UniProt A0A1B6QDX6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G063500 - -
2 Sobic.010G073800 cupin superfamily protein, putative, expressed K09705: uncharacterized protein
3 Sobic.001G401000 pathogenesis-related Bet v I family protein, putative, expressed -
4 Sobic.010G102200 expressed protein -
5 Sobic.010G182300 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
6 Sobic.005G224000 stripe rust resistance protein Yr10, putative, expressed K13457: RPM1, disease resistance protein RPM1
7 Sobic.002G258800 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
8 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
10 Sobic.004G304300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
11 Sobic.008G164201 - -
12 Sobic.001G330500 polygalacturonase inhibitor 1 precursor, putative, expressed -
13 Sobic.005G018300 nucleoside-triphosphatase, putative, expressed K14641: apyrase
14 Sobic.004G152700 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
15 Sobic.001G400900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
16 Sobic.007G212600 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
17 Sobic.001G338100 expressed protein -
18 Sobic.010G166100 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
19 Sobic.005G071100 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
20 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic002G287900 Sobic002G287900 Sobic005G063500 Sobic005G063500 Sobic002G287900--Sobic005G063500 Sobic010G073800 Sobic010G073800 Sobic002G287900--Sobic010G073800 Sobic001G401000 Sobic001G401000 Sobic002G287900--Sobic001G401000 Sobic010G102200 Sobic010G102200 Sobic002G287900--Sobic010G102200 Sobic010G182300 Sobic010G182300 Sobic002G287900--Sobic010G182300 Sobic005G224000 Sobic005G224000 Sobic002G287900--Sobic005G224000 Sobic002G258800 Sobic002G258800 Sobic002G287900--Sobic002G258800 Sobic003G426000 Sobic003G426000 Sobic002G287900--Sobic003G426000 Sobic003G321700 Sobic003G321700 Sobic002G287900--Sobic003G321700 Sobic008G030100 Sobic008G030100 Sobic005G063500--Sobic008G030100 Sobic007G061300 Sobic007G061300 Sobic005G063500--Sobic007G061300 Sobic002G326100 Sobic002G326100 Sobic005G063500--Sobic002G326100 Sobic001G015100 Sobic001G015100 Sobic005G063500--Sobic001G015100 Sobic001G330500 Sobic001G330500 Sobic005G063500--Sobic001G330500 Sobic002G330000 Sobic002G330000 Sobic005G063500--Sobic002G330000 Sobic004G088551 Sobic004G088551 Sobic005G063500--Sobic004G088551 Sobic001G187200 Sobic001G187200 Sobic005G063500--Sobic001G187200 Sobic010G066601 Sobic010G066601 Sobic005G063500--Sobic010G066601 Sobic010G073800--Sobic001G401000 Sobic010G069200 Sobic010G069200 Sobic010G073800--Sobic010G069200 Sobic010G073800--Sobic005G224000 Sobic003G417700 Sobic003G417700 Sobic010G073800--Sobic003G417700 Sobic009G141000 Sobic009G141000 Sobic010G073800--Sobic009G141000 Sobic010G073800--Sobic002G287900 Sobic010G073800--Sobic001G187200 Sobic003G156200 Sobic003G156200 Sobic010G073800--Sobic003G156200 Sobic010G073800--Sobic005G063500 Sobic001G401000--Sobic005G224000 Sobic005G110454 Sobic005G110454 Sobic001G401000--Sobic005G110454 Sobic005G110451 Sobic005G110451 Sobic001G401000--Sobic005G110451 Sobic001G195300 Sobic001G195300 Sobic001G401000--Sobic001G195300 Sobic008G164201 Sobic008G164201 Sobic001G401000--Sobic008G164201 Sobic001G400900 Sobic001G400900 Sobic001G401000--Sobic001G400900 Sobic005G071100 Sobic005G071100 Sobic001G401000--Sobic005G071100 Sobic001G401000--Sobic003G417700 Sobic001G401000--Sobic003G156200 Sobic001G319700 Sobic001G319700 Sobic010G102200--Sobic001G319700 Sobic007G015800 Sobic007G015800 Sobic010G102200--Sobic007G015800 Sobic010G102200--Sobic003G426000 Sobic010G102300 Sobic010G102300 Sobic010G102200--Sobic010G102300 Sobic010G072100 Sobic010G072100 Sobic010G102200--Sobic010G072100 Sobic010G102200--Sobic008G164201 Sobic002G195400 Sobic002G195400 Sobic010G102200--Sobic002G195400 Sobic004G304300 Sobic004G304300 Sobic010G102200--Sobic004G304300 Sobic004G180301 Sobic004G180301 Sobic010G102200--Sobic004G180301 Sobic010G182300--Sobic002G258800 Sobic002G259000 Sobic002G259000 Sobic010G182300--Sobic002G259000 Sobic004G152700 Sobic004G152700 Sobic010G182300--Sobic004G152700 Sobic004G103800 Sobic004G103800 Sobic010G182300--Sobic004G103800 Sobic010G259900 Sobic010G259900 Sobic010G182300--Sobic010G259900 Sobic001G046300 Sobic001G046300 Sobic010G182300--Sobic001G046300 Sobic010G260100 Sobic010G260100 Sobic010G182300--Sobic010G260100 Sobic009G065400 Sobic009G065400 Sobic010G182300--Sobic009G065400 Sobic010G182600 Sobic010G182600 Sobic010G182300--Sobic010G182600 Sobic005G224000--Sobic001G401000 Sobic005G224000--Sobic005G110454 Sobic005G224000--Sobic005G110451 Sobic005G224000--Sobic003G417700 Sobic005G224000--Sobic001G195300 Sobic008G158100 Sobic008G158100 Sobic005G224000--Sobic008G158100 Sobic005G224000--Sobic005G071100 Sobic010G211600 Sobic010G211600 Sobic005G224000--Sobic010G211600 Sobic005G224000--Sobic003G156200 Sobic002G258800--Sobic010G182300 Sobic002G258800--Sobic002G259000 Sobic002G258800--Sobic004G152700 Sobic004G152400 Sobic004G152400 Sobic002G258800--Sobic004G152400 Sobic002G258800--Sobic001G046300 Sobic002G258800--Sobic004G103800 Sobic002G258800--Sobic010G259900 Sobic002G258800--Sobic003G321700 Sobic002G258800--Sobic009G065400 Sobic003G426000--Sobic002G195400 Sobic009G128700 Sobic009G128700 Sobic003G426000--Sobic009G128700 Sobic007G067600 Sobic007G067600 Sobic003G426000--Sobic007G067600 Sobic003G426000--Sobic004G304300 Sobic003G430600 Sobic003G430600 Sobic003G426000--Sobic003G430600 Sobic003G426300 Sobic003G426300 Sobic003G426000--Sobic003G426300 Sobic005G101800 Sobic005G101800 Sobic003G426000--Sobic005G101800 Sobic003G426000--Sobic001G319700 Sobic003G200700 Sobic003G200700 Sobic003G426000--Sobic003G200700 Sobic007G212600 Sobic007G212600 Sobic003G321700--Sobic007G212600 Sobic003G321700--Sobic010G260100 Sobic001G091801 Sobic001G091801 Sobic003G321700--Sobic001G091801 Sobic007G190800 Sobic007G190800 Sobic003G321700--Sobic007G190800 Sobic003G322400 Sobic003G322400 Sobic003G321700--Sobic003G322400 Sobic003G321700--Sobic010G259900 Sobic004G145801 Sobic004G145801 Sobic003G321700--Sobic004G145801 Sobic006G147000 Sobic006G147000 Sobic003G321700--Sobic006G147000 Sobic004G104100 Sobic004G104100 Sobic003G321700--Sobic004G104100
Octagon: transcription factors


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