Gene annotation
Transcriptome id Sobic.005G063500.2
Synonym
Functional annotation -
UniProt A0A1Z5RGX2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G030100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone--flavonone isomerase, putative, expressed -
2 Sobic.007G061300 - -
3 Sobic.002G326100 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
4 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
5 Sobic.001G330500 polygalacturonase inhibitor 1 precursor, putative, expressed -
6 Sobic.002G330000 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
7 Sobic.004G088551 - -
8 Sobic.001G187200 expressed protein -
9 Sobic.010G066601 - -
10 Sobic.004G152700 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
11 Sobic.002G104900 B12D protein, putative, expressed -
12 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.004G148000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
15 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
16 Sobic.006G221200 60S ribosomal protein L27-3, putative, expressed K02901: RP-L27e, large subunit ribosomal protein L27e
17 Sobic.007G212600 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
18 Sobic.004G104100 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
19 Sobic.003G322400 40S ribosomal protein S25, putative, expressed K02975: RP-S25e, small subunit ribosomal protein S25e
20 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -


Gene co-expression network
sample Sobic005G063500 Sobic005G063500 Sobic008G030100 Sobic008G030100 Sobic005G063500--Sobic008G030100 Sobic007G061300 Sobic007G061300 Sobic005G063500--Sobic007G061300 Sobic002G326100 Sobic002G326100 Sobic005G063500--Sobic002G326100 Sobic001G015100 Sobic001G015100 Sobic005G063500--Sobic001G015100 Sobic001G330500 Sobic001G330500 Sobic005G063500--Sobic001G330500 Sobic002G330000 Sobic002G330000 Sobic005G063500--Sobic002G330000 Sobic004G088551 Sobic004G088551 Sobic005G063500--Sobic004G088551 Sobic001G187200 Sobic001G187200 Sobic005G063500--Sobic001G187200 Sobic010G066601 Sobic010G066601 Sobic005G063500--Sobic010G066601 Sobic001G177800 Sobic001G177800 Sobic008G030100--Sobic001G177800 Sobic004G245800 Sobic004G245800 Sobic008G030100--Sobic004G245800 Sobic001G400800 Sobic001G400800 Sobic008G030100--Sobic001G400800 Sobic008G030100--Sobic010G066601 Sobic007G227300 Sobic007G227300 Sobic008G030100--Sobic007G227300 Sobic008G136400 Sobic008G136400 Sobic008G030100--Sobic008G136400 Sobic004G189400 Sobic004G189400 Sobic008G030100--Sobic004G189400 Sobic001G119400 Sobic001G119400 Sobic008G030100--Sobic001G119400 Sobic007G184600 Sobic007G184600 Sobic008G030100--Sobic007G184600 Sobic007G061300--Sobic004G189400 Sobic002G263400 Sobic002G263400 Sobic007G061300--Sobic002G263400 Sobic007G061300--Sobic001G187200 Sobic004G148000 Sobic004G148000 Sobic007G061300--Sobic004G148000 Sobic004G148200 Sobic004G148200 Sobic007G061300--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic007G061300--Sobic005G029200 Sobic007G061300--Sobic004G088551 Sobic010G084400 Sobic010G084400 Sobic007G061300--Sobic010G084400 Sobic007G061300--Sobic007G227300 Sobic001G367600 Sobic001G367600 Sobic002G326100--Sobic001G367600 Sobic004G112300 Sobic004G112300 Sobic002G326100--Sobic004G112300 Sobic004G243100 Sobic004G243100 Sobic002G326100--Sobic004G243100 Sobic003G417350 Sobic003G417350 Sobic002G326100--Sobic003G417350 Sobic001G038900 Sobic001G038900 Sobic002G326100--Sobic001G038900 Sobic002G192000 Sobic002G192000 Sobic002G326100--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic002G326100--Sobic001G231400 Sobic001G423800 Sobic001G423800 Sobic002G326100--Sobic001G423800 Sobic002G326100--Sobic005G029200 Sobic002G140400 Sobic002G140400 Sobic001G015100--Sobic002G140400 Sobic004G187900 Sobic004G187900 Sobic001G015100--Sobic004G187900 Sobic003G430400 Sobic003G430400 Sobic001G015100--Sobic003G430400 Sobic007G155200 Sobic007G155200 Sobic001G015100--Sobic007G155200 Sobic001G124600 Sobic001G124600 Sobic001G015100--Sobic001G124600 Sobic001G015100--Sobic001G423800 Sobic010G238600 Sobic010G238600 Sobic001G015100--Sobic010G238600 Sobic001G015100--Sobic001G038900 Sobic002G211900 Sobic002G211900 Sobic001G015100--Sobic002G211900 Sobic001G495164 Sobic001G495164 Sobic001G330500--Sobic001G495164 Sobic002G195400 Sobic002G195400 Sobic001G330500--Sobic002G195400 Sobic010G117900 Sobic010G117900 Sobic001G330500--Sobic010G117900 Sobic010G102300 Sobic010G102300 Sobic001G330500--Sobic010G102300 Sobic007G067600 Sobic007G067600 Sobic001G330500--Sobic007G067600 Sobic005G101800 Sobic005G101800 Sobic001G330500--Sobic005G101800 Sobic001G319700 Sobic001G319700 Sobic001G330500--Sobic001G319700 Sobic003G426000 Sobic003G426000 Sobic001G330500--Sobic003G426000 Sobic001G231600 Sobic001G231600 Sobic001G330500--Sobic001G231600 Sobic004G145801 Sobic004G145801 Sobic002G330000--Sobic004G145801 Sobic003G321700 Sobic003G321700 Sobic002G330000--Sobic003G321700 Sobic007G212600 Sobic007G212600 Sobic002G330000--Sobic007G212600 Sobic010G260100 Sobic010G260100 Sobic002G330000--Sobic010G260100 Sobic003G249800 Sobic003G249800 Sobic002G330000--Sobic003G249800 Sobic005G019700 Sobic005G019700 Sobic002G330000--Sobic005G019700 Sobic001G091801 Sobic001G091801 Sobic002G330000--Sobic001G091801 Sobic010G230700 Sobic010G230700 Sobic002G330000--Sobic010G230700 Sobic001G390300 Sobic001G390300 Sobic002G330000--Sobic001G390300 Sobic001G317000 Sobic001G317000 Sobic004G088551--Sobic001G317000 Sobic004G088551--Sobic002G195400 Sobic004G088551--Sobic005G101800 Sobic004G088551--Sobic007G067600 Sobic004G088551--Sobic010G117900 Sobic001G317200 Sobic001G317200 Sobic004G088551--Sobic001G317200 Sobic004G088551--Sobic001G423800 Sobic004G088551--Sobic007G061300 Sobic004G088551--Sobic004G112300 Sobic001G187200--Sobic001G177800 Sobic006G268800 Sobic006G268800 Sobic001G187200--Sobic006G268800 Sobic005G011200 Sobic005G011200 Sobic001G187200--Sobic005G011200 Sobic001G187200--Sobic001G400800 Sobic001G187200--Sobic007G227300 Sobic001G402200 Sobic001G402200 Sobic001G187200--Sobic001G402200 Sobic003G307801 Sobic003G307801 Sobic001G187200--Sobic003G307801 Sobic001G187200--Sobic004G148200 Sobic001G187200--Sobic007G061300 Sobic009G141800 Sobic009G141800 Sobic010G066601--Sobic009G141800 Sobic010G066601--Sobic008G030100 Sobic010G178500 Sobic010G178500 Sobic010G066601--Sobic010G178500 Sobic010G066601--Sobic008G136400 Sobic002G104900 Sobic002G104900 Sobic010G066601--Sobic002G104900 Sobic004G321300 Sobic004G321300 Sobic010G066601--Sobic004G321300 Sobic010G066601--Sobic004G189400 Sobic003G387000 Sobic003G387000 Sobic010G066601--Sobic003G387000 Sobic001G107400 Sobic001G107400 Sobic010G066601--Sobic001G107400
Octagon: transcription factors


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