Gene annotation
Transcriptome id Sobic.002G319766.1
Synonym -
Functional annotation -
UniProt A0A1B6QEM1
Pfam PF00004 PF14363
Panther DB PTHR23070 PTHR23070:SF37
NCBI CDD KOG0743; AAA+-type ATPase
KEGG Orthology K08900; mitochondrial chaperone BCS1
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT5G17740 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os07g33390.1 : BCS1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a016039 , Zm00025a045292 , Zm00025a004879 , Zm00025a028637 , Zm00025a008606
Brachypodium KQK15981 , KQJ85594 , KQK15975 , PNT75004 , PNT75003 , KQJ98547 , KQK20476 , KQK20475
Barley HORVU5Hr1G000640.8 , HORVU5Hr1G000640.1 , HORVU5Hr1G000640.3 , HORVU5Hr1G000640.5 , HORVU5Hr1G000640.4 , HORVU5Hr1G000640.7 , HORVU2Hr1G046240.1 , HORVU2Hr1G046240.2 , HORVU2Hr1G046240.3 , HORVU5Hr1G026270.5 , HORVU5Hr1G026270.6 , HORVU5Hr1G026270.1 , HORVU5Hr1G026270.2 , HORVU5Hr1G026270.3 , HORVU2Hr1G046290.3 , HORVU2Hr1G046290.2 , HORVU2Hr1G046290.1 , HORVU2Hr1G046310.2 , HORVU2Hr1G046330.4 , HORVU2Hr1G046330.1 , HORVU2Hr1G046330.2 , HORVU2Hr1G046330.3 , HORVU5Hr1G124260.2 , HORVU5Hr1G124260.3 , HORVU5Hr1G124260.1 , HORVU3Hr1G114150.2 , HORVU2Hr1G046310.3 , HORVU2Hr1G046310.1 , HORVU5Hr1G124290.8 , HORVU5Hr1G124290.7 , HORVU5Hr1G124290.6 , HORVU5Hr1G124290.5 , HORVU5Hr1G124290.4 , HORVU5Hr1G124290.3 , HORVU5Hr1G124290.2 , HORVU5Hr1G124290.1 , HORVU3Hr1G117690.1 , HORVU3Hr1G086670.1 , HORVU3Hr1G086670.2 , HORVU3Hr1G086670.3 , HORVU3Hr1G086670.4 , HORVU3Hr1G086670.5 , HORVU6Hr1G021770.3 , HORVU6Hr1G021770.2 , HORVU6Hr1G021770.1 , HORVU6Hr1G021770.4 , HORVU5Hr1G107410.2 , HORVU5Hr1G107410.3 , HORVU5Hr1G107410.4 , HORVU1Hr1G093600.5 , HORVU1Hr1G093600.4 , HORVU1Hr1G093600.1 , HORVU1Hr1G093600.3 , HORVU1Hr1G093600.2 , HORVU2Hr1G046180.3 , HORVU2Hr1G046180.2 , HORVU2Hr1G046180.1 , HORVU2Hr1G046180.5 , HORVU2Hr1G046180.4
Wheat TraesCS1D02G439400 , TraesCS2B02G247000 , TraesCS3A02G357100 , TraesCS2A02G221700 , TraesCS1D02G439500 , TraesCS1B02G465000 , TraesCS1A02G430200 , TraesCS3B02G389700 , TraesCS3D02G350900 , TraesCS1A02G429300 , TraesCS2D02G227400 , TraesCS2A02G221500 , TraesCS1D02G438800 , TraesCS1B02G464100 , TraesCS2D02G227500 , TraesCS3A02G356800 , TraesCS1A02G430100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G317050 - -
2 Sobic.010G167700 receptor-like protein kinase 5 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
3 Sobic.001G288500 expressed protein K10756: replication factor C subunit 3/5
4 Sobic.003G414200 Zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G251750 - K03935: NADH dehydrogenase (ubiquinone) Fe-S protein 2
6 Sobic.005G110517 - -
7 Sobic.004G140900 - -
8 Sobic.006G199601 - -
9 Sobic.002G118000 ATP synthase, putative, expressed -
10 Sobic.K043600 - -
11 Sobic.003G301050 - -
12 Sobic.003G296250 - -
13 Sobic.001G504300 - -
14 Sobic.003G012750 - -
15 Sobic.010G124100 - -
16 Sobic.008G053500 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
17 Sobic.004G215650 - -
18 Sobic.003G229650 - -
19 Sobic.004G246000 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14780: DHX37, ATP-dependent RNA helicase DHX37/DHR1
20 Sobic.003G187300 - -


Gene co-expression network
sample Sobic002G319766 Sobic002G319766 Sobic004G317050 Sobic004G317050 Sobic002G319766--Sobic004G317050 Sobic010G167700 Sobic010G167700 Sobic002G319766--Sobic010G167700 Sobic001G288500 Sobic001G288500 Sobic002G319766--Sobic001G288500 Sobic003G414200 Sobic003G414200 Sobic002G319766--Sobic003G414200 Sobic001G251750 Sobic001G251750 Sobic002G319766--Sobic001G251750 Sobic005G110517 Sobic005G110517 Sobic002G319766--Sobic005G110517 Sobic004G140900 Sobic004G140900 Sobic002G319766--Sobic004G140900 Sobic006G199601 Sobic006G199601 Sobic002G319766--Sobic006G199601 Sobic002G118000 Sobic002G118000 Sobic002G319766--Sobic002G118000 Sobic003G296250 Sobic003G296250 Sobic004G317050--Sobic003G296250 Sobic004G194600 Sobic004G194600 Sobic004G317050--Sobic004G194600 Sobic004G215650 Sobic004G215650 Sobic004G317050--Sobic004G215650 Sobic004G317050--Sobic003G414200 Sobic001G504300 Sobic001G504300 Sobic004G317050--Sobic001G504300 Sobic004G317050--Sobic002G118000 Sobic007G163200 Sobic007G163200 Sobic004G317050--Sobic007G163200 Sobic001G449300 Sobic001G449300 Sobic004G317050--Sobic001G449300 Sobic001G045100 Sobic001G045100 Sobic004G317050--Sobic001G045100 Sobic003G301050 Sobic003G301050 Sobic010G167700--Sobic003G301050 Sobic003G411150 Sobic003G411150 Sobic010G167700--Sobic003G411150 Sobic010G167700--Sobic005G110517 Sobic010G167700--Sobic006G199601 Sobic010G167700--Sobic001G288500 SobicK043600 SobicK043600 Sobic010G167700--SobicK043600 Sobic010G167700--Sobic001G251750 Sobic010G124100 Sobic010G124100 Sobic010G167700--Sobic010G124100 Sobic003G012750 Sobic003G012750 Sobic010G167700--Sobic003G012750 Sobic001G288500--Sobic006G199601 Sobic001G288500--Sobic005G110517 Sobic008G053500 Sobic008G053500 Sobic001G288500--Sobic008G053500 Sobic001G288500--Sobic010G167700 Sobic001G288500--Sobic003G012750 Sobic010G055900 Sobic010G055900 Sobic001G288500--Sobic010G055900 Sobic010G025600 Sobic010G025600 Sobic001G288500--Sobic010G025600 Sobic001G288500--Sobic003G411150 Sobic010G127700 Sobic010G127700 Sobic001G288500--Sobic010G127700 Sobic003G414200--Sobic001G504300 Sobic003G414200--Sobic004G215650 Sobic003G414200--Sobic004G140900 Sobic010G123650 Sobic010G123650 Sobic003G414200--Sobic010G123650 Sobic001G087850 Sobic001G087850 Sobic003G414200--Sobic001G087850 Sobic003G414200--Sobic007G163200 Sobic006G064900 Sobic006G064900 Sobic003G414200--Sobic006G064900 Sobic001G032850 Sobic001G032850 Sobic003G414200--Sobic001G032850 Sobic003G414200--Sobic004G194600 Sobic001G251750--Sobic004G140900 Sobic001G251750--SobicK043600 Sobic002G074700 Sobic002G074700 Sobic001G251750--Sobic002G074700 Sobic001G251750--Sobic003G301050 Sobic001G251750--Sobic010G167700 Sobic001G251750--Sobic008G053500 Sobic001G251750--Sobic006G199601 Sobic001G251750--Sobic003G012750 Sobic002G365200 Sobic002G365200 Sobic001G251750--Sobic002G365200 Sobic005G110517--Sobic006G199601 Sobic005G110517--Sobic001G288500 Sobic005G110517--Sobic010G025600 Sobic005G110517--Sobic003G012750 Sobic005G110517--Sobic010G167700 Sobic003G229650 Sobic003G229650 Sobic005G110517--Sobic003G229650 Sobic005G110517--Sobic008G053500 Sobic005G110517--Sobic010G127700 Sobic005G110517--Sobic003G411150 Sobic004G140900--Sobic002G074700 Sobic004G140900--Sobic001G504300 Sobic004G140900--Sobic001G032850 Sobic004G140900--Sobic003G414200 Sobic004G140900--Sobic001G251750 Sobic004G140900--Sobic003G012750 Sobic004G140900--Sobic010G025600 Sobic001G154450 Sobic001G154450 Sobic004G140900--Sobic001G154450 Sobic004G140900--Sobic003G301050 Sobic006G199601--Sobic005G110517 Sobic006G199601--Sobic001G288500 Sobic006G199601--Sobic008G053500 Sobic006G199601--Sobic003G012750 Sobic001G325100 Sobic001G325100 Sobic006G199601--Sobic001G325100 Sobic006G199601--Sobic010G055900 Sobic006G199601--Sobic010G025600 Sobic006G199601--Sobic010G167700 Sobic006G199601--Sobic010G127700 Sobic009G209650 Sobic009G209650 Sobic002G118000--Sobic009G209650 Sobic003G168600 Sobic003G168600 Sobic002G118000--Sobic003G168600 Sobic005G194400 Sobic005G194400 Sobic002G118000--Sobic005G194400 Sobic007G103200 Sobic007G103200 Sobic002G118000--Sobic007G103200 Sobic004G272950 Sobic004G272950 Sobic002G118000--Sobic004G272950 Sobic005G173100 Sobic005G173100 Sobic002G118000--Sobic005G173100 Sobic007G132650 Sobic007G132650 Sobic002G118000--Sobic007G132650 Sobic002G118000--Sobic003G296250 SobicK032350 SobicK032350 Sobic002G118000--SobicK032350
Octagon: transcription factors


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