Gene annotation
Transcriptome id Sobic.002G326650.1
Synonym -
Functional annotation -
UniProt A0A1W0W6M5
Pfam PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF43
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23180 : cysteine-rich RLK (RECEPTOR-like protein kinase) 10
RAP-DB (Rice) LOC_Os07g35140.1 : receptor-like serine-threonine protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a048283 , Zm00025a048282 , Zm00025a048280 , Zm00025a056619 , Zm00025a025800 , Zm00025a027261
Brachypodium KQK15905 , PNT73321 , KQK15915 , PNT65312 , PNT65311 , KQJ81935 , KQJ91856 , KQJ91855 , KQJ91854
Barley HORVU3Hr1G077110.9 , HORVU5Hr1G087240.1 , HORVU5Hr1G087240.3 , HORVU3Hr1G077110.39 , HORVU3Hr1G077110.1 , HORVU3Hr1G077110.4 , HORVU3Hr1G077110.6 , HORVU3Hr1G077110.31 , HORVU3Hr1G077110.36 , HORVU3Hr1G077110.35 , HORVU3Hr1G077110.34 , HORVU3Hr1G077110.15 , HORVU3Hr1G077110.14 , HORVU3Hr1G077110.17 , HORVU3Hr1G077110.16 , HORVU3Hr1G077110.11 , HORVU3Hr1G077110.13 , HORVU3Hr1G077110.12 , HORVU3Hr1G077110.19 , HORVU3Hr1G077110.18 , HORVU3Hr1G017020.19 , HORVU3Hr1G017020.18 , HORVU3Hr1G017020.17 , HORVU3Hr1G017020.15 , HORVU3Hr1G017020.14 , HORVU3Hr1G017020.13 , HORVU3Hr1G017020.12 , HORVU3Hr1G017020.11 , HORVU3Hr1G017020.10 , HORVU3Hr1G077110.32 , HORVU3Hr1G017020.33 , HORVU3Hr1G017020.32 , HORVU2Hr1G044890.7 , HORVU2Hr1G044890.6 , HORVU2Hr1G044890.5 , HORVU2Hr1G044890.4 , HORVU2Hr1G044890.3 , HORVU2Hr1G044890.2 , HORVU2Hr1G044890.1 , HORVU2Hr1G044890.9 , HORVU2Hr1G044890.8 , HORVU3Hr1G017020.31 , HORVU3Hr1G017020.34 , HORVU5Hr1G124170.1 , HORVU7Hr1G030870.3 , HORVU7Hr1G030870.1 , HORVU3Hr1G017020.30 , HORVU3Hr1G077110.20 , HORVU3Hr1G077110.21 , HORVU3Hr1G077110.22 , HORVU3Hr1G077110.26 , HORVU3Hr1G077110.27 , HORVU3Hr1G077110.29 , HORVU2Hr1G044890.14 , HORVU2Hr1G044890.13 , HORVU2Hr1G044890.12 , HORVU2Hr1G044890.11 , HORVU2Hr1G044890.10 , HORVU3Hr1G077110.46 , HORVU3Hr1G077110.47 , HORVU3Hr1G077110.44 , HORVU3Hr1G077110.45 , HORVU3Hr1G077110.43 , HORVU3Hr1G077110.49 , HORVU3Hr1G017020.26 , HORVU3Hr1G017020.27 , HORVU3Hr1G017020.25 , HORVU3Hr1G017020.20 , HORVU3Hr1G017020.28 , HORVU3Hr1G017020.29 , HORVU3Hr1G017020.7 , HORVU3Hr1G017020.6 , HORVU3Hr1G017020.5 , HORVU3Hr1G017020.4 , HORVU3Hr1G017020.3 , HORVU3Hr1G017020.2 , HORVU3Hr1G017020.1 , HORVU3Hr1G017020.9 , HORVU3Hr1G017020.8
Wheat TraesCS4B02G171300 , TraesCS2D02G572600 , TraesCS5B02G353400 , TraesCS3B02G110500 , TraesCS3D02G095200 , TraesCS1B02G311700 , TraesCS2A02G217200 , TraesCS2B02G623700 , TraesCS2B02G623700 , TraesCS5B02G353300 , TraesCS2B02G242600 , TraesCS5D02G357800 , TraesCS5D02G357700 , TraesCS2A02G217300 , TraesCS2A02G217300 , TraesCS2A02G217300 , TraesCS7B02G054500 , TraesCS2B02G623900 , TraesCS6D02G402600 , TraesCS2D02G223000 , TraesCS2D02G223100 , TraesCS2D02G223100 , TraesCS2D02G223100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G111100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
2 Sobic.001G054400 expressed protein -
3 Sobic.003G348700 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.007G025700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
5 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
6 Sobic.005G105300 expressed protein -
7 Sobic.001G290400 no apical meristem protein, putative, expressed -
8 Sobic.010G175200 low-affinity cation transporter, putative, expressed -
9 Sobic.004G333900 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
10 Sobic.009G028300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
11 Sobic.004G042600 protein kinase domain containing protein, expressed -
12 Sobic.009G155200 ZOS5-08 - C2H2 zinc finger protein, expressed -
13 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
14 Sobic.008G151300 expressed protein -
15 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.005G139700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
17 Sobic.010G245800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.006G227900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@organic cation transporter protein, putative, expressed -
19 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
20 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -


Gene co-expression network
sample Sobic002G326650 Sobic002G326650 Sobic008G111100 Sobic008G111100 Sobic002G326650--Sobic008G111100 Sobic001G054400 Sobic001G054400 Sobic002G326650--Sobic001G054400 Sobic003G348700 Sobic003G348700 Sobic002G326650--Sobic003G348700 Sobic007G025700 Sobic007G025700 Sobic002G326650--Sobic007G025700 Sobic003G363200 Sobic003G363200 Sobic002G326650--Sobic003G363200 Sobic005G105300 Sobic005G105300 Sobic002G326650--Sobic005G105300 Sobic001G290400 Sobic001G290400 Sobic002G326650--Sobic001G290400 Sobic010G175200 Sobic010G175200 Sobic002G326650--Sobic010G175200 Sobic004G333900 Sobic004G333900 Sobic002G326650--Sobic004G333900 Sobic009G177800 Sobic009G177800 Sobic008G111100--Sobic009G177800 Sobic003G429300 Sobic003G429300 Sobic008G111100--Sobic003G429300 Sobic004G307000 Sobic004G307000 Sobic008G111100--Sobic004G307000 Sobic003G019200 Sobic003G019200 Sobic008G111100--Sobic003G019200 Sobic009G155200 Sobic009G155200 Sobic008G111100--Sobic009G155200 Sobic007G171000 Sobic007G171000 Sobic008G111100--Sobic007G171000 Sobic002G195900 Sobic002G195900 Sobic008G111100--Sobic002G195900 Sobic010G224200 Sobic010G224200 Sobic008G111100--Sobic010G224200 Sobic002G423300 Sobic002G423300 Sobic008G111100--Sobic002G423300 Sobic001G054400--Sobic009G155200 Sobic001G119000 Sobic001G119000 Sobic001G054400--Sobic001G119000 Sobic003G423500 Sobic003G423500 Sobic001G054400--Sobic003G423500 Sobic004G195300 Sobic004G195300 Sobic001G054400--Sobic004G195300 Sobic001G054400--Sobic009G177800 Sobic001G054400--Sobic007G171000 Sobic002G359300 Sobic002G359300 Sobic001G054400--Sobic002G359300 Sobic003G035700 Sobic003G035700 Sobic001G054400--Sobic003G035700 Sobic001G119100 Sobic001G119100 Sobic001G054400--Sobic001G119100 Sobic002G012800 Sobic002G012800 Sobic003G348700--Sobic002G012800 Sobic003G146000 Sobic003G146000 Sobic003G348700--Sobic003G146000 Sobic006G208100 Sobic006G208100 Sobic003G348700--Sobic006G208100 Sobic009G142200 Sobic009G142200 Sobic003G348700--Sobic009G142200 Sobic008G058900 Sobic008G058900 Sobic003G348700--Sobic008G058900 Sobic002G135800 Sobic002G135800 Sobic003G348700--Sobic002G135800 Sobic003G348700--Sobic003G363200 Sobic002G188700 Sobic002G188700 Sobic003G348700--Sobic002G188700 Sobic010G182966 Sobic010G182966 Sobic003G348700--Sobic010G182966 Sobic004G304400 Sobic004G304400 Sobic007G025700--Sobic004G304400 Sobic002G224100 Sobic002G224100 Sobic007G025700--Sobic002G224100 Sobic007G025700--Sobic004G307000 Sobic007G025700--Sobic008G111100 Sobic003G189200 Sobic003G189200 Sobic007G025700--Sobic003G189200 Sobic005G117400 Sobic005G117400 Sobic007G025700--Sobic005G117400 Sobic007G025700--Sobic009G177800 Sobic004G158901 Sobic004G158901 Sobic007G025700--Sobic004G158901 Sobic001G474200 Sobic001G474200 Sobic007G025700--Sobic001G474200 Sobic005G139700 Sobic005G139700 Sobic003G363200--Sobic005G139700 Sobic010G200700 Sobic010G200700 Sobic003G363200--Sobic010G200700 Sobic003G431000 Sobic003G431000 Sobic003G363200--Sobic003G431000 Sobic002G219200 Sobic002G219200 Sobic003G363200--Sobic002G219200 Sobic001G028000 Sobic001G028000 Sobic003G363200--Sobic001G028000 Sobic003G363200--Sobic001G290400 Sobic004G297200 Sobic004G297200 Sobic003G363200--Sobic004G297200 Sobic006G078400 Sobic006G078400 Sobic003G363200--Sobic006G078400 Sobic010G245800 Sobic010G245800 Sobic003G363200--Sobic010G245800 Sobic004G267500 Sobic004G267500 Sobic005G105300--Sobic004G267500 Sobic005G105300--Sobic004G158901 Sobic002G379866 Sobic002G379866 Sobic005G105300--Sobic002G379866 Sobic005G105300--Sobic005G117400 Sobic005G105300--Sobic002G224100 Sobic005G105300--Sobic007G025700 Sobic001G074200 Sobic001G074200 Sobic005G105300--Sobic001G074200 Sobic001G157200 Sobic001G157200 Sobic005G105300--Sobic001G157200 Sobic005G105300--Sobic003G189200 Sobic002G118600 Sobic002G118600 Sobic001G290400--Sobic002G118600 Sobic002G294700 Sobic002G294700 Sobic001G290400--Sobic002G294700 Sobic001G051800 Sobic001G051800 Sobic001G290400--Sobic001G051800 Sobic004G053200 Sobic004G053200 Sobic001G290400--Sobic004G053200 Sobic003G338900 Sobic003G338900 Sobic001G290400--Sobic003G338900 Sobic001G473900 Sobic001G473900 Sobic001G290400--Sobic001G473900 Sobic010G228000 Sobic010G228000 Sobic001G290400--Sobic010G228000 Sobic001G290400--Sobic005G139700 Sobic001G538866 Sobic001G538866 Sobic001G290400--Sobic001G538866 Sobic010G175200--Sobic004G297200 Sobic004G042600 Sobic004G042600 Sobic010G175200--Sobic004G042600 Sobic010G175200--Sobic006G078400 Sobic009G044400 Sobic009G044400 Sobic010G175200--Sobic009G044400 Sobic003G341100 Sobic003G341100 Sobic010G175200--Sobic003G341100 Sobic010G175200--Sobic010G200700 Sobic010G175200--Sobic003G363200 Sobic003G158600 Sobic003G158600 Sobic010G175200--Sobic003G158600 Sobic010G078600 Sobic010G078600 Sobic010G175200--Sobic010G078600 Sobic008G177800 Sobic008G177800 Sobic004G333900--Sobic008G177800 Sobic008G074900 Sobic008G074900 Sobic004G333900--Sobic008G074900 Sobic005G103300 Sobic005G103300 Sobic004G333900--Sobic005G103300 Sobic004G333900--Sobic002G294700 Sobic003G288600 Sobic003G288600 Sobic004G333900--Sobic003G288600 Sobic010G234600 Sobic010G234600 Sobic004G333900--Sobic010G234600 Sobic008G151300 Sobic008G151300 Sobic004G333900--Sobic008G151300 Sobic005G010200 Sobic005G010200 Sobic004G333900--Sobic005G010200 Sobic002G248100 Sobic002G248100 Sobic004G333900--Sobic002G248100
Octagon: transcription factors


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