Gene annotation
Transcriptome id Sobic.002G340500.1
Synonym Sb02g036480
Functional annotation oligonucleotide/oligosaccharide-binding fold containing 2B, putative, expressed
UniProt C5XBL5
Pfam -
Panther DB PTHR13356
NCBI CDD KOG3416; Predicted nucleic acid binding protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63690 : Nucleic acid-binding, OB-fold-like protein
RAP-DB (Rice) LOC_Os07g37710.1 : oligonucleotide/oligosaccharide-binding fold containing 2B, putative, expressed
MaizeGDB (Corn) Zm00025a014921
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G528600 remorin family protein, putative, expressed -
2 Sobic.009G157600 DUF740 domain containing protein, expressed -
3 Sobic.008G075100 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K03575: A/G-specific adenine glycosylase
4 Sobic.006G155800 hus1-like protein, expressed K10903: HUS1 checkpoint protein
5 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
6 Sobic.002G353200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsBZR1(Ortholog in rice:Zhu et al. (2015))(PubMedID : 31659861)@BES1/BZR1 homolog protein, putative, expressed K14503: brassinosteroid resistant 1/2
7 Sobic.004G176500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
8 Sobic.004G331200 expressed protein -
9 Sobic.009G087300 mitotic checkpoint family protein, putative, expressed -
10 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.001G404700 protein kinase, putative, expressed -
12 Sobic.004G268800 nodulin, putative, expressed -
13 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
14 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.001G230300 shugoshin-1, putative, expressed -
16 Sobic.007G187400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
17 Sobic.001G296000 expressed protein -
18 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G309800 remorin C-terminal domain containing protein, putative, expressed -
20 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein


Gene co-expression network
sample Sobic002G340500 Sobic002G340500 Sobic001G528600 Sobic001G528600 Sobic002G340500--Sobic001G528600 Sobic009G157600 Sobic009G157600 Sobic002G340500--Sobic009G157600 Sobic008G075100 Sobic008G075100 Sobic002G340500--Sobic008G075100 Sobic006G155800 Sobic006G155800 Sobic002G340500--Sobic006G155800 Sobic001G078600 Sobic001G078600 Sobic002G340500--Sobic001G078600 Sobic002G353200 Sobic002G353200 Sobic002G340500--Sobic002G353200 Sobic004G176500 Sobic004G176500 Sobic002G340500--Sobic004G176500 Sobic004G331200 Sobic004G331200 Sobic002G340500--Sobic004G331200 Sobic009G087300 Sobic009G087300 Sobic002G340500--Sobic009G087300 Sobic001G528600--Sobic001G078600 Sobic001G107200 Sobic001G107200 Sobic001G528600--Sobic001G107200 Sobic002G280700 Sobic002G280700 Sobic001G528600--Sobic002G280700 Sobic004G152200 Sobic004G152200 Sobic001G528600--Sobic004G152200 Sobic006G191700 Sobic006G191700 Sobic001G528600--Sobic006G191700 Sobic010G274000 Sobic010G274000 Sobic001G528600--Sobic010G274000 Sobic001G528600--Sobic004G331200 Sobic005G047100 Sobic005G047100 Sobic001G528600--Sobic005G047100 Sobic006G102900 Sobic006G102900 Sobic001G528600--Sobic006G102900 Sobic010G227200 Sobic010G227200 Sobic009G157600--Sobic010G227200 Sobic004G047100 Sobic004G047100 Sobic009G157600--Sobic004G047100 Sobic002G230800 Sobic002G230800 Sobic009G157600--Sobic002G230800 Sobic003G107200 Sobic003G107200 Sobic009G157600--Sobic003G107200 Sobic006G138900 Sobic006G138900 Sobic009G157600--Sobic006G138900 Sobic006G081800 Sobic006G081800 Sobic009G157600--Sobic006G081800 Sobic001G255600 Sobic001G255600 Sobic009G157600--Sobic001G255600 Sobic001G091500 Sobic001G091500 Sobic009G157600--Sobic001G091500 Sobic009G120700 Sobic009G120700 Sobic009G157600--Sobic009G120700 Sobic003G444300 Sobic003G444300 Sobic008G075100--Sobic003G444300 Sobic008G113300 Sobic008G113300 Sobic008G075100--Sobic008G113300 Sobic008G075100--Sobic009G087300 Sobic007G006800 Sobic007G006800 Sobic008G075100--Sobic007G006800 Sobic009G192700 Sobic009G192700 Sobic008G075100--Sobic009G192700 Sobic001G083300 Sobic001G083300 Sobic008G075100--Sobic001G083300 Sobic003G153900 Sobic003G153900 Sobic008G075100--Sobic003G153900 Sobic001G105800 Sobic001G105800 Sobic008G075100--Sobic001G105800 Sobic009G184200 Sobic009G184200 Sobic008G075100--Sobic009G184200 Sobic002G236700 Sobic002G236700 Sobic006G155800--Sobic002G236700 Sobic006G155800--Sobic001G255600 Sobic009G109300 Sobic009G109300 Sobic006G155800--Sobic009G109300 Sobic002G246900 Sobic002G246900 Sobic006G155800--Sobic002G246900 Sobic001G175000 Sobic001G175000 Sobic006G155800--Sobic001G175000 Sobic006G155800--Sobic009G157600 Sobic006G155800--Sobic003G107200 Sobic006G155800--Sobic002G230800 Sobic002G315400 Sobic002G315400 Sobic006G155800--Sobic002G315400 Sobic001G078600--Sobic006G102900 Sobic002G426800 Sobic002G426800 Sobic001G078600--Sobic002G426800 Sobic001G078600--Sobic010G274000 Sobic005G144600 Sobic005G144600 Sobic001G078600--Sobic005G144600 Sobic004G197400 Sobic004G197400 Sobic001G078600--Sobic004G197400 Sobic004G285900 Sobic004G285900 Sobic001G078600--Sobic004G285900 Sobic006G116500 Sobic006G116500 Sobic001G078600--Sobic006G116500 Sobic001G078600--Sobic001G528600 Sobic007G154500 Sobic007G154500 Sobic001G078600--Sobic007G154500 Sobic010G222100 Sobic010G222100 Sobic002G353200--Sobic010G222100 Sobic001G289900 Sobic001G289900 Sobic002G353200--Sobic001G289900 Sobic007G132900 Sobic007G132900 Sobic002G353200--Sobic007G132900 Sobic001G300400 Sobic001G300400 Sobic002G353200--Sobic001G300400 Sobic002G353200--Sobic004G331200 Sobic003G102000 Sobic003G102000 Sobic002G353200--Sobic003G102000 Sobic002G289800 Sobic002G289800 Sobic002G353200--Sobic002G289800 Sobic001G030400 Sobic001G030400 Sobic002G353200--Sobic001G030400 Sobic003G410600 Sobic003G410600 Sobic002G353200--Sobic003G410600 Sobic010G066900 Sobic010G066900 Sobic004G176500--Sobic010G066900 Sobic009G238700 Sobic009G238700 Sobic004G176500--Sobic009G238700 Sobic001G347100 Sobic001G347100 Sobic004G176500--Sobic001G347100 Sobic007G179600 Sobic007G179600 Sobic004G176500--Sobic007G179600 Sobic004G128666 Sobic004G128666 Sobic004G176500--Sobic004G128666 Sobic005G210700 Sobic005G210700 Sobic004G176500--Sobic005G210700 Sobic004G176500--Sobic008G075100 Sobic002G172500 Sobic002G172500 Sobic004G176500--Sobic002G172500 Sobic004G241000 Sobic004G241000 Sobic004G176500--Sobic004G241000 Sobic004G331200--Sobic001G289900 Sobic010G105400 Sobic010G105400 Sobic004G331200--Sobic010G105400 Sobic004G331200--Sobic001G078600 Sobic004G331200--Sobic001G528600 Sobic004G331200--Sobic006G191700 Sobic001G468500 Sobic001G468500 Sobic004G331200--Sobic001G468500 Sobic004G331200--Sobic003G444300 Sobic004G331200--Sobic001G255600 Sobic008G096200 Sobic008G096200 Sobic004G331200--Sobic008G096200 Sobic002G204400 Sobic002G204400 Sobic009G087300--Sobic002G204400 Sobic009G087300--Sobic010G105400 Sobic009G087300--Sobic005G144600 Sobic002G303800 Sobic002G303800 Sobic009G087300--Sobic002G303800 Sobic003G201000 Sobic003G201000 Sobic009G087300--Sobic003G201000 Sobic001G122100 Sobic001G122100 Sobic009G087300--Sobic001G122100 Sobic009G087300--Sobic003G444300 Sobic006G281400 Sobic006G281400 Sobic009G087300--Sobic006G281400 Sobic005G000500 Sobic005G000500 Sobic009G087300--Sobic005G000500
Octagon: transcription factors


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