Gene annotation
Transcriptome id Sobic.006G155800.1
Synonym Sb06g023290
Functional annotation hus1-like protein, expressed
UniProt A0A097PQE5 , C5YCJ4
Pfam PF04005
Panther DB PTHR12900 PTHR12900:SF0
NCBI CDD KOG3999; Checkpoint 9-1-1 complex, HUS1 component
KEGG Orthology K10903; HUS1 checkpoint protein
Gene Ontology GO:0006281; DNA repair GO:0000077DNA damage checkpoint


Orthologs (automatic annotation)
TAIR AT1G52530 : -
RAP-DB (Rice) LOC_Os04g44620.2 : hus1-like protein, expressed
MaizeGDB (Corn) Zm00025a056556
Brachypodium KQJ83710 , KQJ83711
Barley HORVU2Hr1G090950.8 , HORVU2Hr1G090950.3 , HORVU2Hr1G090950.2 , HORVU2Hr1G090950.1 , HORVU2Hr1G090950.7 , HORVU2Hr1G090950.6 , HORVU2Hr1G090950.5 , HORVU2Hr1G090950.4
Wheat TraesCS2D02G370300 , TraesCSU02G020000 , TraesCS2A02G374000 , TraesCS2A02G374000 , TraesCS2A02G374000 , TraesCSU02G020000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
2 Sobic.001G255600 endonuclease/Exonuclease/phosphatase family protein, expressed -
3 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
4 Sobic.002G246900 expressed protein -
5 Sobic.001G175000 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
6 Sobic.009G157600 DUF740 domain containing protein, expressed -
7 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
8 Sobic.002G230800 expressed protein -
9 Sobic.002G315400 expressed protein -
10 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
11 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
12 Sobic.010G227200 expressed protein -
13 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
14 Sobic.001G429500 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed -
15 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
16 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
17 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
18 Sobic.010G191000 expressed protein -
19 Sobic.004G331200 expressed protein -
20 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type


Gene co-expression network
sample Sobic006G155800 Sobic006G155800 Sobic002G236700 Sobic002G236700 Sobic006G155800--Sobic002G236700 Sobic001G255600 Sobic001G255600 Sobic006G155800--Sobic001G255600 Sobic009G109300 Sobic009G109300 Sobic006G155800--Sobic009G109300 Sobic002G246900 Sobic002G246900 Sobic006G155800--Sobic002G246900 Sobic001G175000 Sobic001G175000 Sobic006G155800--Sobic001G175000 Sobic009G157600 Sobic009G157600 Sobic006G155800--Sobic009G157600 Sobic003G107200 Sobic003G107200 Sobic006G155800--Sobic003G107200 Sobic002G230800 Sobic002G230800 Sobic006G155800--Sobic002G230800 Sobic002G315400 Sobic002G315400 Sobic006G155800--Sobic002G315400 Sobic002G236700--Sobic002G246900 Sobic001G140700 Sobic001G140700 Sobic002G236700--Sobic001G140700 Sobic001G532800 Sobic001G532800 Sobic002G236700--Sobic001G532800 Sobic002G236700--Sobic003G107200 Sobic002G236700--Sobic009G109300 Sobic007G112100 Sobic007G112100 Sobic002G236700--Sobic007G112100 Sobic002G236700--Sobic002G315400 Sobic007G218100 Sobic007G218100 Sobic002G236700--Sobic007G218100 Sobic010G191000 Sobic010G191000 Sobic002G236700--Sobic010G191000 Sobic001G255600--Sobic002G230800 Sobic001G255600--Sobic010G191000 Sobic001G255600--Sobic002G246900 Sobic010G105400 Sobic010G105400 Sobic001G255600--Sobic010G105400 Sobic004G047100 Sobic004G047100 Sobic001G255600--Sobic004G047100 Sobic001G169800 Sobic001G169800 Sobic001G255600--Sobic001G169800 Sobic005G129700 Sobic005G129700 Sobic001G255600--Sobic005G129700 Sobic010G227200 Sobic010G227200 Sobic001G255600--Sobic010G227200 Sobic001G255600--Sobic002G236700 Sobic009G109300--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic009G109300--Sobic006G051000 Sobic010G103700 Sobic010G103700 Sobic009G109300--Sobic010G103700 Sobic006G195500 Sobic006G195500 Sobic009G109300--Sobic006G195500 Sobic001G238900 Sobic001G238900 Sobic009G109300--Sobic001G238900 Sobic009G109300--Sobic002G230800 Sobic003G183700 Sobic003G183700 Sobic009G109300--Sobic003G183700 Sobic003G179500 Sobic003G179500 Sobic009G109300--Sobic003G179500 Sobic009G109300--Sobic002G246900 Sobic002G246900--Sobic004G047100 Sobic002G246900--Sobic010G105400 Sobic002G246900--Sobic010G191000 Sobic002G246900--Sobic003G107200 Sobic002G246900--Sobic001G238900 Sobic009G181500 Sobic009G181500 Sobic002G246900--Sobic009G181500 Sobic002G246900--Sobic002G236700 Sobic002G246900--Sobic001G169800 Sobic002G246900--Sobic002G230800 Sobic006G179200 Sobic006G179200 Sobic001G175000--Sobic006G179200 Sobic001G175000--Sobic002G246900 Sobic001G521100 Sobic001G521100 Sobic001G175000--Sobic001G521100 Sobic001G175000--Sobic010G105400 Sobic002G113400 Sobic002G113400 Sobic001G175000--Sobic002G113400 Sobic006G134200 Sobic006G134200 Sobic001G175000--Sobic006G134200 Sobic004G117300 Sobic004G117300 Sobic001G175000--Sobic004G117300 Sobic003G134500 Sobic003G134500 Sobic001G175000--Sobic003G134500 Sobic001G175000--Sobic004G047100 Sobic009G157600--Sobic010G227200 Sobic009G157600--Sobic004G047100 Sobic009G157600--Sobic002G230800 Sobic009G157600--Sobic003G107200 Sobic006G138900 Sobic006G138900 Sobic009G157600--Sobic006G138900 Sobic006G081800 Sobic006G081800 Sobic009G157600--Sobic006G081800 Sobic009G157600--Sobic001G255600 Sobic001G091500 Sobic001G091500 Sobic009G157600--Sobic001G091500 Sobic009G120700 Sobic009G120700 Sobic009G157600--Sobic009G120700 Sobic006G102900 Sobic006G102900 Sobic003G107200--Sobic006G102900 Sobic003G107200--Sobic002G246900 Sobic003G107200--Sobic004G047100 Sobic003G107200--Sobic009G181500 Sobic001G261549 Sobic001G261549 Sobic003G107200--Sobic001G261549 Sobic007G154500 Sobic007G154500 Sobic003G107200--Sobic007G154500 Sobic001G078600 Sobic001G078600 Sobic003G107200--Sobic001G078600 Sobic003G107200--Sobic002G236700 Sobic002G426800 Sobic002G426800 Sobic003G107200--Sobic002G426800 Sobic002G230800--Sobic001G238900 Sobic002G230800--Sobic010G105400 Sobic006G124400 Sobic006G124400 Sobic002G230800--Sobic006G124400 Sobic001G054700 Sobic001G054700 Sobic002G230800--Sobic001G054700 Sobic002G230800--Sobic003G179500 Sobic002G230800--Sobic009G109300 Sobic002G230800--Sobic007G218100 Sobic002G230800--Sobic002G246900 Sobic003G244000 Sobic003G244000 Sobic002G230800--Sobic003G244000 Sobic002G315400--Sobic001G521100 Sobic002G092200 Sobic002G092200 Sobic002G315400--Sobic002G092200 Sobic002G351100 Sobic002G351100 Sobic002G315400--Sobic002G351100 Sobic002G315400--Sobic002G236700 Sobic002G315400--Sobic009G109300 Sobic003G412800 Sobic003G412800 Sobic002G315400--Sobic003G412800 Sobic003G297200 Sobic003G297200 Sobic002G315400--Sobic003G297200 Sobic002G315400--Sobic002G246900 Sobic002G315400--Sobic007G112100
Octagon: transcription factors


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