Gene annotation
Transcriptome id Sobic.002G347400.1,Sobic.002G347400.3,Sobic.002G347400.2
Synonym Sb02g037000
Functional annotation expressed protein
UniProt A0A1W0W751 , C5XCA7
Pfam PF05910
Panther DB PTHR31972 PTHR31972:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G28150 : Plant protein of unknown function (DUF868)
RAP-DB (Rice) LOC_Os07g38460.1 : expressed protein
MaizeGDB (Corn) Zm00025a048461
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
2 Sobic.001G146000 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
3 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
4 Sobic.003G394100 expressed protein -
5 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
6 Sobic.004G203900 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
7 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
8 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
9 Sobic.001G051300 BEE 1, putative, expressed -
10 Sobic.008G075200 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed K01627: 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)
11 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
12 Sobic.008G039800 rhoGAP domain containing protein, expressed -
13 Sobic.006G218600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBK15 - F-box domain and kelch repeat containing protein, expressed -
14 Sobic.005G129201 - -
15 Sobic.010G018500 expressed protein -
16 Sobic.001G176900 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
17 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
18 Sobic.003G277300 Up-reguralion under heat(PubMedID : 24916767)@expressed protein -
19 Sobic.002G317600 endoribonuclease, putative, expressed -
20 Sobic.004G184000 SFT2, putative, expressed -


Gene co-expression network
sample Sobic002G347400 Sobic002G347400 Sobic007G173000 Sobic007G173000 Sobic002G347400--Sobic007G173000 Sobic001G146000 Sobic001G146000 Sobic002G347400--Sobic001G146000 Sobic008G084100 Sobic008G084100 Sobic002G347400--Sobic008G084100 Sobic003G394100 Sobic003G394100 Sobic002G347400--Sobic003G394100 Sobic010G277000 Sobic010G277000 Sobic002G347400--Sobic010G277000 Sobic004G203900 Sobic004G203900 Sobic002G347400--Sobic004G203900 Sobic001G107200 Sobic001G107200 Sobic002G347400--Sobic001G107200 Sobic003G442300 Sobic003G442300 Sobic002G347400--Sobic003G442300 Sobic001G051300 Sobic001G051300 Sobic002G347400--Sobic001G051300 Sobic006G071628 Sobic006G071628 Sobic007G173000--Sobic006G071628 Sobic007G173000--Sobic001G051300 Sobic001G196000 Sobic001G196000 Sobic007G173000--Sobic001G196000 Sobic007G139500 Sobic007G139500 Sobic007G173000--Sobic007G139500 Sobic005G129201 Sobic005G129201 Sobic007G173000--Sobic005G129201 Sobic002G232400 Sobic002G232400 Sobic007G173000--Sobic002G232400 Sobic009G061000 Sobic009G061000 Sobic007G173000--Sobic009G061000 Sobic002G370400 Sobic002G370400 Sobic007G173000--Sobic002G370400 Sobic009G256700 Sobic009G256700 Sobic007G173000--Sobic009G256700 Sobic010G018500 Sobic010G018500 Sobic001G146000--Sobic010G018500 Sobic003G266400 Sobic003G266400 Sobic001G146000--Sobic003G266400 Sobic002G111500 Sobic002G111500 Sobic001G146000--Sobic002G111500 Sobic001G146000--Sobic002G347400 Sobic008G057900 Sobic008G057900 Sobic001G146000--Sobic008G057900 Sobic006G278100 Sobic006G278100 Sobic001G146000--Sobic006G278100 Sobic001G146000--Sobic008G084100 Sobic003G444200 Sobic003G444200 Sobic001G146000--Sobic003G444200 Sobic001G131600 Sobic001G131600 Sobic001G146000--Sobic001G131600 Sobic008G084100--Sobic010G277000 Sobic001G035400 Sobic001G035400 Sobic008G084100--Sobic001G035400 Sobic003G238500 Sobic003G238500 Sobic008G084100--Sobic003G238500 Sobic001G073600 Sobic001G073600 Sobic008G084100--Sobic001G073600 Sobic007G048700 Sobic007G048700 Sobic008G084100--Sobic007G048700 Sobic001G370700 Sobic001G370700 Sobic008G084100--Sobic001G370700 Sobic001G413100 Sobic001G413100 Sobic008G084100--Sobic001G413100 Sobic008G084100--Sobic002G232400 Sobic006G203900 Sobic006G203900 Sobic008G084100--Sobic006G203900 Sobic001G103000 Sobic001G103000 Sobic003G394100--Sobic001G103000 Sobic003G394100--Sobic002G347400 Sobic003G394100--Sobic007G173000 Sobic007G114500 Sobic007G114500 Sobic003G394100--Sobic007G114500 Sobic003G394100--Sobic003G442300 Sobic005G204700 Sobic005G204700 Sobic003G394100--Sobic005G204700 Sobic008G039800 Sobic008G039800 Sobic003G394100--Sobic008G039800 Sobic003G394100--Sobic001G146000 Sobic002G166400 Sobic002G166400 Sobic003G394100--Sobic002G166400 Sobic010G277000--Sobic008G084100 Sobic007G191600 Sobic007G191600 Sobic010G277000--Sobic007G191600 Sobic010G277000--Sobic001G035400 Sobic001G214900 Sobic001G214900 Sobic010G277000--Sobic001G214900 Sobic010G277000--Sobic003G238500 Sobic001G026600 Sobic001G026600 Sobic010G277000--Sobic001G026600 Sobic002G054000 Sobic002G054000 Sobic010G277000--Sobic002G054000 Sobic003G205400 Sobic003G205400 Sobic010G277000--Sobic003G205400 Sobic005G027300 Sobic005G027300 Sobic010G277000--Sobic005G027300 Sobic003G071400 Sobic003G071400 Sobic004G203900--Sobic003G071400 Sobic004G265600 Sobic004G265600 Sobic004G203900--Sobic004G265600 Sobic003G151300 Sobic003G151300 Sobic004G203900--Sobic003G151300 Sobic009G032600 Sobic009G032600 Sobic004G203900--Sobic009G032600 Sobic006G038200 Sobic006G038200 Sobic004G203900--Sobic006G038200 Sobic008G000100 Sobic008G000100 Sobic004G203900--Sobic008G000100 Sobic004G203900--Sobic002G347400 Sobic003G098600 Sobic003G098600 Sobic004G203900--Sobic003G098600 Sobic004G168700 Sobic004G168700 Sobic004G203900--Sobic004G168700 Sobic001G528600 Sobic001G528600 Sobic001G107200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic005G047100 Sobic005G047100 Sobic001G107200--Sobic005G047100 Sobic007G094400 Sobic007G094400 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic001G107200--Sobic006G278100 Sobic001G401600 Sobic001G401600 Sobic003G442300--Sobic001G401600 Sobic002G246900 Sobic002G246900 Sobic003G442300--Sobic002G246900 Sobic006G218600 Sobic006G218600 Sobic003G442300--Sobic006G218600 Sobic009G181500 Sobic009G181500 Sobic003G442300--Sobic009G181500 Sobic001G521100 Sobic001G521100 Sobic003G442300--Sobic001G521100 Sobic010G051100 Sobic010G051100 Sobic003G442300--Sobic010G051100 Sobic001G025900 Sobic001G025900 Sobic003G442300--Sobic001G025900 Sobic007G176800 Sobic007G176800 Sobic003G442300--Sobic007G176800 Sobic006G102900 Sobic006G102900 Sobic003G442300--Sobic006G102900 Sobic003G289800 Sobic003G289800 Sobic001G051300--Sobic003G289800 Sobic002G383100 Sobic002G383100 Sobic001G051300--Sobic002G383100 Sobic001G051300--Sobic007G139500 Sobic009G087000 Sobic009G087000 Sobic001G051300--Sobic009G087000 Sobic001G051300--Sobic006G071628 Sobic003G179500 Sobic003G179500 Sobic001G051300--Sobic003G179500 Sobic010G147700 Sobic010G147700 Sobic001G051300--Sobic010G147700 Sobic003G017500 Sobic003G017500 Sobic001G051300--Sobic003G017500 Sobic003G201000 Sobic003G201000 Sobic001G051300--Sobic003G201000
Octagon: transcription factors


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