Gene annotation
Transcriptome id Sobic.003G277300.1
Synonym Sb03g032910
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
expressed protein
UniProt C5XIB0
Pfam PF15749
Panther DB PTHR15863 PTHR15863:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71760 : -
RAP-DB (Rice) LOC_Os01g51850.1 : expressed protein
MaizeGDB (Corn) Zm00025a038969
Brachypodium PNT72713 , KQK09479 , KQK09480
Barley HORVU3Hr1G067750.18 , HORVU3Hr1G067750.14 , HORVU3Hr1G067750.16 , HORVU3Hr1G067750.13
Wheat TraesCS3D02G247200 , TraesCS3D02G247200 , TraesCS3B02G275800 , TraesCS3B02G275800 , TraesCS3B02G275800 , TraesCS3A02G244200 , TraesCS3A02G244200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G218600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBK15 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.004G197400 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
3 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
4 Sobic.001G103000 DNA binding protein, putative, expressed -
5 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
6 Sobic.007G154500 F-box protein, putative, expressed -
7 Sobic.003G201000 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
9 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
10 Sobic.001G456500 RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
11 Sobic.006G116500 expressed protein -
12 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
13 Sobic.001G142000 deoxyuridine 5-triphosphate nucleotidohydrolase, putative, expressed K01520: dut, dUTP pyrophosphatase
14 Sobic.001G016800 protein binding protein, putative, expressed K11271: DSCC1, sister chromatid cohesion protein DCC1
15 Sobic.001G013400 nuf2 family protein, expressed -
16 Sobic.003G294500 dynamin family protein, putative, expressed -
17 Sobic.010G004900 CWC15 homolog A, putative, expressed K12863: protein CWC15
18 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
19 Sobic.006G191700 expansin precursor, putative, expressed -
20 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic003G277300 Sobic003G277300 Sobic006G218600 Sobic006G218600 Sobic003G277300--Sobic006G218600 Sobic004G197400 Sobic004G197400 Sobic003G277300--Sobic004G197400 Sobic003G135400 Sobic003G135400 Sobic003G277300--Sobic003G135400 Sobic001G103000 Sobic001G103000 Sobic003G277300--Sobic001G103000 Sobic003G442300 Sobic003G442300 Sobic003G277300--Sobic003G442300 Sobic007G154500 Sobic007G154500 Sobic003G277300--Sobic007G154500 Sobic003G201000 Sobic003G201000 Sobic003G277300--Sobic003G201000 Sobic009G189200 Sobic009G189200 Sobic003G277300--Sobic009G189200 Sobic004G355500 Sobic004G355500 Sobic003G277300--Sobic004G355500 Sobic001G069700 Sobic001G069700 Sobic006G218600--Sobic001G069700 Sobic006G218600--Sobic003G442300 Sobic006G218600--Sobic003G277300 Sobic001G013400 Sobic001G013400 Sobic006G218600--Sobic001G013400 Sobic001G456500 Sobic001G456500 Sobic006G218600--Sobic001G456500 Sobic006G134900 Sobic006G134900 Sobic006G218600--Sobic006G134900 Sobic005G098600 Sobic005G098600 Sobic006G218600--Sobic005G098600 Sobic001G105800 Sobic001G105800 Sobic006G218600--Sobic001G105800 Sobic001G142000 Sobic001G142000 Sobic006G218600--Sobic001G142000 Sobic003G294500 Sobic003G294500 Sobic004G197400--Sobic003G294500 Sobic005G144600 Sobic005G144600 Sobic004G197400--Sobic005G144600 Sobic004G197400--Sobic001G456500 Sobic006G116500 Sobic006G116500 Sobic004G197400--Sobic006G116500 Sobic010G274000 Sobic010G274000 Sobic004G197400--Sobic010G274000 Sobic001G070300 Sobic001G070300 Sobic004G197400--Sobic001G070300 Sobic001G078600 Sobic001G078600 Sobic004G197400--Sobic001G078600 Sobic004G197400--Sobic004G355500 Sobic010G147700 Sobic010G147700 Sobic004G197400--Sobic010G147700 Sobic003G410600 Sobic003G410600 Sobic003G135400--Sobic003G410600 Sobic003G135400--Sobic001G078600 Sobic003G135400--Sobic003G294500 Sobic003G135400--Sobic004G197400 Sobic008G141200 Sobic008G141200 Sobic003G135400--Sobic008G141200 Sobic003G135400--Sobic005G144600 Sobic007G219400 Sobic007G219400 Sobic003G135400--Sobic007G219400 Sobic003G135400--Sobic001G103000 Sobic005G047100 Sobic005G047100 Sobic003G135400--Sobic005G047100 Sobic001G103000--Sobic010G274000 Sobic001G103000--Sobic004G355500 Sobic002G191000 Sobic002G191000 Sobic001G103000--Sobic002G191000 Sobic007G139500 Sobic007G139500 Sobic001G103000--Sobic007G139500 Sobic001G103000--Sobic003G135400 Sobic001G103000--Sobic003G410600 Sobic001G103000--Sobic004G197400 Sobic007G152900 Sobic007G152900 Sobic001G103000--Sobic007G152900 Sobic001G103000--Sobic006G116500 Sobic001G401600 Sobic001G401600 Sobic003G442300--Sobic001G401600 Sobic002G246900 Sobic002G246900 Sobic003G442300--Sobic002G246900 Sobic003G442300--Sobic006G218600 Sobic009G181500 Sobic009G181500 Sobic003G442300--Sobic009G181500 Sobic001G521100 Sobic001G521100 Sobic003G442300--Sobic001G521100 Sobic010G051100 Sobic010G051100 Sobic003G442300--Sobic010G051100 Sobic001G025900 Sobic001G025900 Sobic003G442300--Sobic001G025900 Sobic007G176800 Sobic007G176800 Sobic003G442300--Sobic007G176800 Sobic006G102900 Sobic006G102900 Sobic003G442300--Sobic006G102900 Sobic007G154500--Sobic006G102900 Sobic007G154500--Sobic001G078600 Sobic002G426800 Sobic002G426800 Sobic007G154500--Sobic002G426800 Sobic002G146601 Sobic002G146601 Sobic007G154500--Sobic002G146601 Sobic003G107200 Sobic003G107200 Sobic007G154500--Sobic003G107200 Sobic007G154500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic007G154500--Sobic004G047100 Sobic001G261549 Sobic001G261549 Sobic007G154500--Sobic001G261549 Sobic004G285900 Sobic004G285900 Sobic007G154500--Sobic004G285900 Sobic003G201000--Sobic010G147700 Sobic003G369200 Sobic003G369200 Sobic003G201000--Sobic003G369200 Sobic009G087000 Sobic009G087000 Sobic003G201000--Sobic009G087000 Sobic003G444300 Sobic003G444300 Sobic003G201000--Sobic003G444300 Sobic003G201000--Sobic005G144600 Sobic010G054600 Sobic010G054600 Sobic003G201000--Sobic010G054600 Sobic006G029300 Sobic006G029300 Sobic003G201000--Sobic006G029300 Sobic002G290000 Sobic002G290000 Sobic003G201000--Sobic002G290000 Sobic005G110535 Sobic005G110535 Sobic003G201000--Sobic005G110535 Sobic009G189200--Sobic006G102900 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600 Sobic004G355500--Sobic006G116500 Sobic004G355500--Sobic001G456500 Sobic004G355500--Sobic007G152900 Sobic010G103700 Sobic010G103700 Sobic004G355500--Sobic010G103700 Sobic001G169800 Sobic001G169800 Sobic004G355500--Sobic001G169800 Sobic004G355500--Sobic004G197400 Sobic009G088200 Sobic009G088200 Sobic004G355500--Sobic009G088200 Sobic004G355500--Sobic001G103000 Sobic008G129200 Sobic008G129200 Sobic004G355500--Sobic008G129200
Octagon: transcription factors


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