Gene annotation
Transcriptome id Sobic.002G347800.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0W715
Pfam -
Panther DB PTHR33165 PTHR33165:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g38480.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT64109
Barley HORVU0Hr1G040450.1
Wheat TraesCS6B02G371100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G006000 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
2 Sobic.009G099050 - -
3 Sobic.009G128300 CUE domain containing protein, expressed -
4 Sobic.002G342100 no apical meristem protein, putative, expressed -
5 Sobic.010G114800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
6 Sobic.004G045800 phytosulfokine receptor precursor, putative, expressed -
7 Sobic.003G078600 - -
8 Sobic.006G034650 - -
9 Sobic.001G112000 3,4-dihydroxy-2-butanone kinase, putative, expressed K00863: DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
10 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.007G190901 - -
12 Sobic.003G367350 - -
13 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
14 Sobic.003G233900 - -
15 Sobic.006G216500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G182800 expressed protein -
17 Sobic.005G110487 - -
18 Sobic.008G040900 amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
19 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
20 Sobic.010G233300 ZOS6-07 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic002G347800 Sobic002G347800 Sobic007G006000 Sobic007G006000 Sobic002G347800--Sobic007G006000 Sobic009G099050 Sobic009G099050 Sobic002G347800--Sobic009G099050 Sobic009G128300 Sobic009G128300 Sobic002G347800--Sobic009G128300 Sobic002G342100 Sobic002G342100 Sobic002G347800--Sobic002G342100 Sobic010G114800 Sobic010G114800 Sobic002G347800--Sobic010G114800 Sobic004G045800 Sobic004G045800 Sobic002G347800--Sobic004G045800 Sobic003G078600 Sobic003G078600 Sobic002G347800--Sobic003G078600 Sobic006G034650 Sobic006G034650 Sobic002G347800--Sobic006G034650 Sobic001G112000 Sobic001G112000 Sobic002G347800--Sobic001G112000 Sobic007G006000--Sobic009G099050 Sobic007G006000--Sobic003G078600 Sobic010G233300 Sobic010G233300 Sobic007G006000--Sobic010G233300 Sobic007G006000--Sobic002G347800 Sobic010G061300 Sobic010G061300 Sobic007G006000--Sobic010G061300 Sobic007G006000--Sobic006G034650 Sobic008G043450 Sobic008G043450 Sobic007G006000--Sobic008G043450 Sobic003G367350 Sobic003G367350 Sobic007G006000--Sobic003G367350 Sobic010G091366 Sobic010G091366 Sobic007G006000--Sobic010G091366 Sobic009G099050--Sobic010G233300 Sobic009G099050--Sobic007G006000 Sobic009G099050--Sobic002G347800 Sobic009G099050--Sobic003G078600 Sobic009G030701 Sobic009G030701 Sobic009G099050--Sobic009G030701 Sobic009G099050--Sobic010G091366 Sobic009G066850 Sobic009G066850 Sobic009G099050--Sobic009G066850 Sobic002G168100 Sobic002G168100 Sobic009G099050--Sobic002G168100 Sobic003G051300 Sobic003G051300 Sobic009G099050--Sobic003G051300 Sobic002G182800 Sobic002G182800 Sobic009G128300--Sobic002G182800 Sobic003G233900 Sobic003G233900 Sobic009G128300--Sobic003G233900 Sobic003G227600 Sobic003G227600 Sobic009G128300--Sobic003G227600 Sobic001G509400 Sobic001G509400 Sobic009G128300--Sobic001G509400 Sobic009G128300--Sobic002G342100 Sobic002G331450 Sobic002G331450 Sobic009G128300--Sobic002G331450 Sobic008G044750 Sobic008G044750 Sobic009G128300--Sobic008G044750 Sobic003G079800 Sobic003G079800 Sobic009G128300--Sobic003G079800 Sobic001G075101 Sobic001G075101 Sobic009G128300--Sobic001G075101 Sobic002G342100--Sobic009G128300 Sobic002G342100--Sobic001G075101 Sobic002G342100--Sobic002G182800 Sobic002G342100--Sobic003G227600 Sobic002G342100--Sobic002G331450 Sobic007G169600 Sobic007G169600 Sobic002G342100--Sobic007G169600 Sobic003G083000 Sobic003G083000 Sobic002G342100--Sobic003G083000 Sobic007G153001 Sobic007G153001 Sobic002G342100--Sobic007G153001 Sobic002G037400 Sobic002G037400 Sobic002G342100--Sobic002G037400 Sobic010G114800--Sobic003G367350 Sobic004G310600 Sobic004G310600 Sobic010G114800--Sobic004G310600 Sobic009G000700 Sobic009G000700 Sobic010G114800--Sobic009G000700 Sobic010G220400 Sobic010G220400 Sobic010G114800--Sobic010G220400 Sobic003G373150 Sobic003G373150 Sobic010G114800--Sobic003G373150 Sobic006G267900 Sobic006G267900 Sobic010G114800--Sobic006G267900 Sobic003G078501 Sobic003G078501 Sobic010G114800--Sobic003G078501 Sobic010G006700 Sobic010G006700 Sobic010G114800--Sobic010G006700 Sobic010G114800--Sobic003G233900 Sobic004G045800--Sobic002G182800 Sobic004G045800--Sobic003G227600 Sobic002G013966 Sobic002G013966 Sobic004G045800--Sobic002G013966 Sobic003G040800 Sobic003G040800 Sobic004G045800--Sobic003G040800 Sobic004G045800--Sobic003G233900 Sobic004G045800--Sobic009G128300 Sobic009G216900 Sobic009G216900 Sobic004G045800--Sobic009G216900 Sobic004G045800--Sobic003G083000 Sobic004G045800--Sobic002G342100 Sobic003G078600--Sobic007G006000 Sobic003G078600--Sobic003G367350 Sobic003G078600--Sobic009G099050 Sobic003G078600--Sobic003G078501 Sobic007G217300 Sobic007G217300 Sobic003G078600--Sobic007G217300 Sobic003G078600--Sobic010G114800 Sobic003G078600--Sobic002G347800 Sobic001G159850 Sobic001G159850 Sobic003G078600--Sobic001G159850 Sobic005G110487 Sobic005G110487 Sobic006G034650--Sobic005G110487 Sobic007G101000 Sobic007G101000 Sobic006G034650--Sobic007G101000 Sobic006G034650--Sobic004G045800 Sobic009G253950 Sobic009G253950 Sobic006G034650--Sobic009G253950 Sobic006G034650--Sobic003G040800 Sobic006G034650--Sobic003G233900 Sobic006G034650--Sobic009G128300 Sobic006G034650--Sobic007G006000 Sobic001G106000 Sobic001G106000 Sobic006G034650--Sobic001G106000 Sobic001G112000--Sobic002G342100 Sobic001G112000--Sobic009G128300 Sobic008G031300 Sobic008G031300 Sobic001G112000--Sobic008G031300 Sobic001G112000--Sobic003G227600 Sobic004G211301 Sobic004G211301 Sobic001G112000--Sobic004G211301 Sobic001G112000--Sobic001G509400 Sobic001G112000--Sobic002G331450 Sobic001G112000--Sobic002G182800 Sobic005G096700 Sobic005G096700 Sobic001G112000--Sobic005G096700
Octagon: transcription factors


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