Gene annotation
Transcriptome id Sobic.002G406900.1
Synonym Sb02g042090
Functional annotation OsFBX444 - F-box domain containing protein, expressed
UniProt C5X4T8
Pfam -
Panther DB PTHR35828 PTHR35828:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g27810.1 : OsFBX444 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G002700 sorgoleone-producing in root hair(PubmedID : 15361534)@fatty acid desaturase, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
2 Sobic.006G234900 expressed protein -
3 Sobic.006G101300 expressed protein -
4 Sobic.006G026500 expressed protein -
5 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
6 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -
7 Sobic.001G512633 - -
8 Sobic.003G313100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.002G044600 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
11 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
12 Sobic.008G158501 - -
13 Sobic.002G390900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WD40-like Beta Propeller Repeat family protein, expressed -
14 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.001G062132 - -
16 Sobic.002G012400 DUF538 domain containing protein, putative, expressed -
17 Sobic.007G215600 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
18 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.008G066200 expressed protein -
20 Sobic.006G154400 GEM, putative, expressed -


Gene co-expression network
sample Sobic002G406900 Sobic002G406900 Sobic005G002700 Sobic005G002700 Sobic002G406900--Sobic005G002700 Sobic006G234900 Sobic006G234900 Sobic002G406900--Sobic006G234900 Sobic006G101300 Sobic006G101300 Sobic002G406900--Sobic006G101300 Sobic006G026500 Sobic006G026500 Sobic002G406900--Sobic006G026500 Sobic004G159400 Sobic004G159400 Sobic002G406900--Sobic004G159400 Sobic008G036800 Sobic008G036800 Sobic002G406900--Sobic008G036800 Sobic001G512633 Sobic001G512633 Sobic002G406900--Sobic001G512633 Sobic003G313100 Sobic003G313100 Sobic002G406900--Sobic003G313100 Sobic002G044600 Sobic002G044600 Sobic002G406900--Sobic002G044600 Sobic002G012500 Sobic002G012500 Sobic005G002700--Sobic002G012500 Sobic001G487600 Sobic001G487600 Sobic005G002700--Sobic001G487600 Sobic008G022000 Sobic008G022000 Sobic005G002700--Sobic008G022000 Sobic002G012400 Sobic002G012400 Sobic005G002700--Sobic002G012400 Sobic009G171500 Sobic009G171500 Sobic005G002700--Sobic009G171500 Sobic006G096000 Sobic006G096000 Sobic005G002700--Sobic006G096000 Sobic003G426600 Sobic003G426600 Sobic005G002700--Sobic003G426600 Sobic005G002700--Sobic008G036800 Sobic001G280800 Sobic001G280800 Sobic005G002700--Sobic001G280800 Sobic005G108601 Sobic005G108601 Sobic006G234900--Sobic005G108601 Sobic006G234900--Sobic006G101300 Sobic002G115025 Sobic002G115025 Sobic006G234900--Sobic002G115025 Sobic006G234900--Sobic006G026500 Sobic003G418500 Sobic003G418500 Sobic006G234900--Sobic003G418500 Sobic001G256200 Sobic001G256200 Sobic006G234900--Sobic001G256200 Sobic002G042000 Sobic002G042000 Sobic006G234900--Sobic002G042000 Sobic002G093700 Sobic002G093700 Sobic006G234900--Sobic002G093700 Sobic006G227750 Sobic006G227750 Sobic006G234900--Sobic006G227750 Sobic006G101300--Sobic006G234900 Sobic006G101100 Sobic006G101100 Sobic006G101300--Sobic006G101100 Sobic006G101300--Sobic002G042000 Sobic006G101300--Sobic006G026500 Sobic008G066200 Sobic008G066200 Sobic006G101300--Sobic008G066200 Sobic004G169300 Sobic004G169300 Sobic006G101300--Sobic004G169300 Sobic007G008000 Sobic007G008000 Sobic006G101300--Sobic007G008000 Sobic006G101300--Sobic008G022000 Sobic006G101300--Sobic003G418500 Sobic006G026500--Sobic006G234900 Sobic006G026500--Sobic006G101300 Sobic006G026500--Sobic002G044600 Sobic002G422300 Sobic002G422300 Sobic006G026500--Sobic002G422300 Sobic001G188800 Sobic001G188800 Sobic006G026500--Sobic001G188800 Sobic002G010900 Sobic002G010900 Sobic006G026500--Sobic002G010900 Sobic001G062132 Sobic001G062132 Sobic006G026500--Sobic001G062132 Sobic002G012300 Sobic002G012300 Sobic006G026500--Sobic002G012300 Sobic008G140900 Sobic008G140900 Sobic006G026500--Sobic008G140900 Sobic001G197000 Sobic001G197000 Sobic004G159400--Sobic001G197000 Sobic001G508466 Sobic001G508466 Sobic004G159400--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic004G159400--Sobic008G006300 Sobic001G047800 Sobic001G047800 Sobic004G159400--Sobic001G047800 Sobic003G273000 Sobic003G273000 Sobic004G159400--Sobic003G273000 Sobic002G418400 Sobic002G418400 Sobic004G159400--Sobic002G418400 Sobic002G329900 Sobic002G329900 Sobic004G159400--Sobic002G329900 Sobic004G259432 Sobic004G259432 Sobic004G159400--Sobic004G259432 Sobic004G232500 Sobic004G232500 Sobic004G159400--Sobic004G232500 Sobic008G036800--Sobic002G012300 Sobic008G036800--Sobic002G012500 Sobic008G036800--Sobic008G022000 Sobic008G158600 Sobic008G158600 Sobic008G036800--Sobic008G158600 Sobic008G158501 Sobic008G158501 Sobic008G036800--Sobic008G158501 Sobic008G036800--Sobic003G426600 Sobic008G036800--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic008G036800--Sobic006G008000 Sobic008G036800--Sobic002G044600 Sobic003G265150 Sobic003G265150 Sobic001G512633--Sobic003G265150 Sobic001G192750 Sobic001G192750 Sobic001G512633--Sobic001G192750 Sobic001G512633--Sobic002G406900 Sobic006G138966 Sobic006G138966 Sobic001G512633--Sobic006G138966 Sobic002G104200 Sobic002G104200 Sobic001G512633--Sobic002G104200 Sobic002G185400 Sobic002G185400 Sobic001G512633--Sobic002G185400 Sobic001G512633--Sobic005G002700 Sobic005G088400 Sobic005G088400 Sobic001G512633--Sobic005G088400 Sobic005G073101 Sobic005G073101 Sobic001G512633--Sobic005G073101 Sobic003G079200 Sobic003G079200 Sobic003G313100--Sobic003G079200 Sobic003G313100--Sobic008G066200 Sobic009G145600 Sobic009G145600 Sobic003G313100--Sobic009G145600 Sobic008G066401 Sobic008G066401 Sobic003G313100--Sobic008G066401 Sobic003G313100--Sobic006G008000 Sobic003G313100--Sobic006G101100 Sobic003G313100--Sobic002G012500 Sobic009G145700 Sobic009G145700 Sobic003G313100--Sobic009G145700 Sobic003G313100--Sobic008G022000 Sobic002G044600--Sobic008G036800 Sobic002G044600--Sobic006G026500 Sobic002G044600--Sobic001G062132 Sobic002G044600--Sobic002G012300 Sobic002G044600--Sobic006G234900 Sobic002G044600--Sobic006G101300 Sobic002G044600--Sobic008G158501 Sobic002G044600--Sobic008G158600 Sobic002G044600--Sobic008G022000
Octagon: transcription factors


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