Gene annotation
Transcriptome id Sobic.002G413500.2
Synonym Sb02g042610
Functional annotation F-actin-capping protein subunit alpha, putative, expressed
UniProt A0A1B6QG75
Pfam PF01267
Panther DB PTHR10653 PTHR10653:SF0
NCBI CDD KOG0836; F-actin capping protein, alpha subunit
KEGG Orthology K10364; capping protein (actin filament) muscle Z-line, alpha
Gene Ontology GO:0008290; F-actin capping protein complex


Orthologs (automatic annotation)
TAIR AT3G05520 : Subunits of heterodimeric actin filament capping protein Capz superfamily
RAP-DB (Rice) LOC_Os07g23200.1 : F-actin-capping protein subunit alpha, putative, expressed
MaizeGDB (Corn) Zm00025a015414 , Zm00025a049128
Brachypodium KQK14692
Barley HORVU2Hr1G019650.3 , HORVU2Hr1G019650.2 , HORVU2Hr1G019650.1
Wheat TraesCS2D02G113500
Populus -


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cDNA sequences
Sobic.002G413500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G328100 expressed protein -
2 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
3 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
4 Sobic.002G054700 indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K01695: tryptophan synthase alpha chain
5 Sobic.008G013200 expressed protein -
6 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
7 Sobic.001G025700 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
8 Sobic.001G446300 expressed protein -
9 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
10 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
11 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
12 Sobic.002G186500 UPF0041 domain containing protein, putative, expressed -
13 Sobic.001G499500 la domain containing protein, putative, expressed K18757: la-related protein 1
14 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
15 Sobic.002G377900 mitosis protein dim1, putative, expressed -
16 Sobic.010G231700 expressed protein -
17 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
18 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
19 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
20 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O


Gene co-expression network
sample Sobic002G413500 Sobic002G413500 Sobic004G328100 Sobic004G328100 Sobic002G413500--Sobic004G328100 Sobic003G308300 Sobic003G308300 Sobic002G413500--Sobic003G308300 Sobic006G232800 Sobic006G232800 Sobic002G413500--Sobic006G232800 Sobic002G054700 Sobic002G054700 Sobic002G413500--Sobic002G054700 Sobic008G013200 Sobic008G013200 Sobic002G413500--Sobic008G013200 Sobic002G348400 Sobic002G348400 Sobic002G413500--Sobic002G348400 Sobic001G025700 Sobic001G025700 Sobic002G413500--Sobic001G025700 Sobic001G446300 Sobic001G446300 Sobic002G413500--Sobic001G446300 Sobic001G309200 Sobic001G309200 Sobic002G413500--Sobic001G309200 Sobic002G304500 Sobic002G304500 Sobic004G328100--Sobic002G304500 Sobic002G382100 Sobic002G382100 Sobic004G328100--Sobic002G382100 Sobic008G007800 Sobic008G007800 Sobic004G328100--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic004G328100--Sobic002G361500 Sobic005G201200 Sobic005G201200 Sobic004G328100--Sobic005G201200 Sobic002G377900 Sobic002G377900 Sobic004G328100--Sobic002G377900 Sobic002G016000 Sobic002G016000 Sobic004G328100--Sobic002G016000 Sobic001G080800 Sobic001G080800 Sobic004G328100--Sobic001G080800 Sobic010G198400 Sobic010G198400 Sobic004G328100--Sobic010G198400 Sobic003G255700 Sobic003G255700 Sobic003G308300--Sobic003G255700 Sobic003G308300--Sobic008G013200 Sobic009G186700 Sobic009G186700 Sobic003G308300--Sobic009G186700 Sobic007G148400 Sobic007G148400 Sobic003G308300--Sobic007G148400 Sobic007G218600 Sobic007G218600 Sobic003G308300--Sobic007G218600 Sobic001G305900 Sobic001G305900 Sobic003G308300--Sobic001G305900 Sobic003G308300--Sobic004G328100 Sobic006G100266 Sobic006G100266 Sobic003G308300--Sobic006G100266 Sobic003G270100 Sobic003G270100 Sobic003G308300--Sobic003G270100 Sobic001G378800 Sobic001G378800 Sobic006G232800--Sobic001G378800 Sobic001G385000 Sobic001G385000 Sobic006G232800--Sobic001G385000 Sobic003G394500 Sobic003G394500 Sobic006G232800--Sobic003G394500 Sobic001G149000 Sobic001G149000 Sobic006G232800--Sobic001G149000 Sobic010G086300 Sobic010G086300 Sobic006G232800--Sobic010G086300 Sobic001G280500 Sobic001G280500 Sobic006G232800--Sobic001G280500 Sobic002G313100 Sobic002G313100 Sobic006G232800--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic006G232800--Sobic002G392400 Sobic006G265800 Sobic006G265800 Sobic006G232800--Sobic006G265800 Sobic002G397900 Sobic002G397900 Sobic002G054700--Sobic002G397900 Sobic002G259700 Sobic002G259700 Sobic002G054700--Sobic002G259700 Sobic004G116400 Sobic004G116400 Sobic002G054700--Sobic004G116400 Sobic002G255400 Sobic002G255400 Sobic002G054700--Sobic002G255400 Sobic003G089100 Sobic003G089100 Sobic002G054700--Sobic003G089100 Sobic003G201500 Sobic003G201500 Sobic002G054700--Sobic003G201500 Sobic006G041800 Sobic006G041800 Sobic002G054700--Sobic006G041800 Sobic001G188000 Sobic001G188000 Sobic002G054700--Sobic001G188000 Sobic003G260600 Sobic003G260600 Sobic002G054700--Sobic003G260600 Sobic008G013200--Sobic003G308300 Sobic008G013200--Sobic002G016000 Sobic008G013200--Sobic003G255700 Sobic008G013200--Sobic005G201200 Sobic002G066700 Sobic002G066700 Sobic008G013200--Sobic002G066700 Sobic008G013200--Sobic002G304500 Sobic002G158300 Sobic002G158300 Sobic008G013200--Sobic002G158300 Sobic008G013200--Sobic004G328100 Sobic006G038700 Sobic006G038700 Sobic008G013200--Sobic006G038700 Sobic010G153400 Sobic010G153400 Sobic002G348400--Sobic010G153400 Sobic002G348400--Sobic002G392400 Sobic007G086600 Sobic007G086600 Sobic002G348400--Sobic007G086600 Sobic001G117900 Sobic001G117900 Sobic002G348400--Sobic001G117900 Sobic002G348400--Sobic001G305900 Sobic002G348400--Sobic001G309200 Sobic002G348400--Sobic001G280500 Sobic003G004800 Sobic003G004800 Sobic002G348400--Sobic003G004800 Sobic002G348400--Sobic001G188000 Sobic001G025700--Sobic003G308300 Sobic001G025700--Sobic008G013200 Sobic001G025700--Sobic003G255700 Sobic007G153500 Sobic007G153500 Sobic001G025700--Sobic007G153500 Sobic001G025700--Sobic004G328100 Sobic001G025700--Sobic002G348400 Sobic001G025700--Sobic009G186700 Sobic010G069500 Sobic010G069500 Sobic001G025700--Sobic010G069500 Sobic001G025700--Sobic007G148400 Sobic007G004300 Sobic007G004300 Sobic001G446300--Sobic007G004300 Sobic001G282200 Sobic001G282200 Sobic001G446300--Sobic001G282200 Sobic003G235100 Sobic003G235100 Sobic001G446300--Sobic003G235100 Sobic003G065201 Sobic003G065201 Sobic001G446300--Sobic003G065201 Sobic008G136700 Sobic008G136700 Sobic001G446300--Sobic008G136700 Sobic005G145201 Sobic005G145201 Sobic001G446300--Sobic005G145201 Sobic009G252200 Sobic009G252200 Sobic001G446300--Sobic009G252200 Sobic001G446300--Sobic002G397900 Sobic006G115100 Sobic006G115100 Sobic001G446300--Sobic006G115100 Sobic001G309200--Sobic002G348400 Sobic001G309200--Sobic001G188000 Sobic001G309200--Sobic003G260600 Sobic001G309200--Sobic001G117900 Sobic009G066200 Sobic009G066200 Sobic001G309200--Sobic009G066200 Sobic002G308000 Sobic002G308000 Sobic001G309200--Sobic002G308000 Sobic001G309200--Sobic002G392400 Sobic001G309200--Sobic010G153400 Sobic001G309200--Sobic007G086600
Octagon: transcription factors


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