Gene annotation
Transcriptome id Sobic.003G030600.1
Synonym CYP90D2;CYP90D2, CYP90D1, Sb03g002870
Functional annotation "Cytochrome P450 family protein, involved in brassinosteroids biosynthesis" (PubMedID : 26333774)
"D2(Ortholog in rice:Hong et al., 2003)" (PubMedID : 31659866)
cytochrome P450, putative, expressed
UniProt C5XLV4
Pfam PF00067
Panther DB PTHR24286 PTHR24286:SF30
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K09589; CYP90D2, steroid 3-oxidase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G13730 : cytochrome P450, family 90, subfamily D, polypeptide 1
RAP-DB (Rice) LOC_Os01g10040.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a043149 , Zm00025a023003
Brachypodium KQK07095 , KQK07094 , KQK03164
Barley HORVU3Hr1G018860.8 , HORVU3Hr1G018860.6 , HORVU3Hr1G018860.7 , HORVU3Hr1G018860.4 , HORVU3Hr1G018860.5 , HORVU3Hr1G018860.2 , HORVU3Hr1G018860.3 , HORVU3Hr1G018860.1
Wheat TraesCS3D02G106100 , TraesCS3A02G103800 , TraesCS3B02G121200 , TraesCS3B02G121200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G445000 cation efflux family protein, putative, expressed -
2 Sobic.001G408800 hydrolase, alpha/beta fold family protein, putative, expressed -
3 Sobic.003G052700 -(PubMedID : 23108465)@alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
4 Sobic.001G183600 galactosyltransferase, putative, expressed -
5 Sobic.010G110500 AMP-binding enzyme, putative, expressed -
6 Sobic.009G251100 TTL1, putative, expressed K09527: DnaJ homolog subfamily C member 7
7 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
8 Sobic.010G228100 "DEP3(Ortholog in rice:Qiao et al., 2011)"(PubMedID : 31659937)@PLA IIIA/PLP7, putative, expressed -
9 Sobic.001G348900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
10 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.008G064601 - -
12 Sobic.001G021500 CESA5 - cellulose synthase, expressed K10999: cellulose synthase A
13 Sobic.002G314800 monocopper oxidase, putative, expressed -
14 Sobic.008G008300 expressed protein -
15 Sobic.007G197700 BHLH transcription factor, putative, expressed -
16 Sobic.001G112800 - -
17 Sobic.008G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
18 Sobic.001G047900 expressed protein -
19 Sobic.004G275400 RING-H2 finger protein ATL5G, putative, expressed -
20 Sobic.004G134100 glycosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G030600 Sobic003G030600 Sobic001G445000 Sobic001G445000 Sobic003G030600--Sobic001G445000 Sobic001G408800 Sobic001G408800 Sobic003G030600--Sobic001G408800 Sobic003G052700 Sobic003G052700 Sobic003G030600--Sobic003G052700 Sobic001G183600 Sobic001G183600 Sobic003G030600--Sobic001G183600 Sobic010G110500 Sobic010G110500 Sobic003G030600--Sobic010G110500 Sobic009G251100 Sobic009G251100 Sobic003G030600--Sobic009G251100 Sobic003G366300 Sobic003G366300 Sobic003G030600--Sobic003G366300 Sobic010G228100 Sobic010G228100 Sobic003G030600--Sobic010G228100 Sobic001G348900 Sobic001G348900 Sobic003G030600--Sobic001G348900 Sobic009G129500 Sobic009G129500 Sobic001G445000--Sobic009G129500 Sobic007G009000 Sobic007G009000 Sobic001G445000--Sobic007G009000 Sobic001G112800 Sobic001G112800 Sobic001G445000--Sobic001G112800 Sobic004G001000 Sobic004G001000 Sobic001G445000--Sobic004G001000 Sobic001G242800 Sobic001G242800 Sobic001G445000--Sobic001G242800 Sobic009G117000 Sobic009G117000 Sobic001G445000--Sobic009G117000 Sobic002G319200 Sobic002G319200 Sobic001G445000--Sobic002G319200 Sobic001G131100 Sobic001G131100 Sobic001G445000--Sobic001G131100 Sobic002G392800 Sobic002G392800 Sobic001G445000--Sobic002G392800 Sobic004G265600 Sobic004G265600 Sobic001G408800--Sobic004G265600 Sobic008G103800 Sobic008G103800 Sobic001G408800--Sobic008G103800 Sobic008G051100 Sobic008G051100 Sobic001G408800--Sobic008G051100 Sobic009G125900 Sobic009G125900 Sobic001G408800--Sobic009G125900 Sobic001G533100 Sobic001G533100 Sobic001G408800--Sobic001G533100 Sobic002G342500 Sobic002G342500 Sobic001G408800--Sobic002G342500 Sobic010G059200 Sobic010G059200 Sobic001G408800--Sobic010G059200 Sobic006G038200 Sobic006G038200 Sobic001G408800--Sobic006G038200 Sobic004G275400 Sobic004G275400 Sobic001G408800--Sobic004G275400 Sobic007G017400 Sobic007G017400 Sobic003G052700--Sobic007G017400 Sobic003G023800 Sobic003G023800 Sobic003G052700--Sobic003G023800 Sobic003G217632 Sobic003G217632 Sobic003G052700--Sobic003G217632 Sobic010G092100 Sobic010G092100 Sobic003G052700--Sobic010G092100 Sobic007G156101 Sobic007G156101 Sobic003G052700--Sobic007G156101 Sobic002G306300 Sobic002G306300 Sobic003G052700--Sobic002G306300 Sobic008G147101 Sobic008G147101 Sobic003G052700--Sobic008G147101 Sobic002G330800 Sobic002G330800 Sobic003G052700--Sobic002G330800 Sobic001G361900 Sobic001G361900 Sobic003G052700--Sobic001G361900 Sobic009G206500 Sobic009G206500 Sobic001G183600--Sobic009G206500 Sobic009G026101 Sobic009G026101 Sobic001G183600--Sobic009G026101 Sobic002G275500 Sobic002G275500 Sobic001G183600--Sobic002G275500 Sobic009G063400 Sobic009G063400 Sobic001G183600--Sobic009G063400 Sobic001G029800 Sobic001G029800 Sobic001G183600--Sobic001G029800 Sobic007G119500 Sobic007G119500 Sobic001G183600--Sobic007G119500 Sobic010G090500 Sobic010G090500 Sobic001G183600--Sobic010G090500 Sobic001G183600--Sobic003G366300 Sobic002G393200 Sobic002G393200 Sobic001G183600--Sobic002G393200 Sobic001G099300 Sobic001G099300 Sobic010G110500--Sobic001G099300 Sobic006G253200 Sobic006G253200 Sobic010G110500--Sobic006G253200 Sobic003G020700 Sobic003G020700 Sobic010G110500--Sobic003G020700 Sobic010G022000 Sobic010G022000 Sobic010G110500--Sobic010G022000 Sobic010G169200 Sobic010G169200 Sobic010G110500--Sobic010G169200 Sobic004G086500 Sobic004G086500 Sobic010G110500--Sobic004G086500 Sobic007G218400 Sobic007G218400 Sobic010G110500--Sobic007G218400 Sobic010G230400 Sobic010G230400 Sobic010G110500--Sobic010G230400 Sobic001G356300 Sobic001G356300 Sobic010G110500--Sobic001G356300 Sobic004G296300 Sobic004G296300 Sobic009G251100--Sobic004G296300 Sobic010G120300 Sobic010G120300 Sobic009G251100--Sobic010G120300 Sobic010G096100 Sobic010G096100 Sobic009G251100--Sobic010G096100 Sobic003G419600 Sobic003G419600 Sobic009G251100--Sobic003G419600 Sobic001G196000 Sobic001G196000 Sobic009G251100--Sobic001G196000 Sobic001G073150 Sobic001G073150 Sobic009G251100--Sobic001G073150 Sobic004G243800 Sobic004G243800 Sobic009G251100--Sobic004G243800 Sobic001G437500 Sobic001G437500 Sobic009G251100--Sobic001G437500 Sobic009G251100--Sobic009G063400 Sobic003G270400 Sobic003G270400 Sobic003G366300--Sobic003G270400 Sobic005G112000 Sobic005G112000 Sobic003G366300--Sobic005G112000 Sobic001G388000 Sobic001G388000 Sobic003G366300--Sobic001G388000 Sobic007G091900 Sobic007G091900 Sobic003G366300--Sobic007G091900 Sobic003G366300--Sobic007G119500 Sobic005G110600 Sobic005G110600 Sobic003G366300--Sobic005G110600 Sobic003G099166 Sobic003G099166 Sobic003G366300--Sobic003G099166 Sobic004G163600 Sobic004G163600 Sobic003G366300--Sobic004G163600 Sobic003G198500 Sobic003G198500 Sobic003G366300--Sobic003G198500 Sobic001G334900 Sobic001G334900 Sobic010G228100--Sobic001G334900 Sobic003G006100 Sobic003G006100 Sobic010G228100--Sobic003G006100 Sobic001G037400 Sobic001G037400 Sobic010G228100--Sobic001G037400 Sobic009G232200 Sobic009G232200 Sobic010G228100--Sobic009G232200 Sobic010G228100--Sobic004G243800 Sobic009G033400 Sobic009G033400 Sobic010G228100--Sobic009G033400 Sobic004G168700 Sobic004G168700 Sobic010G228100--Sobic004G168700 Sobic003G031400 Sobic003G031400 Sobic010G228100--Sobic003G031400 Sobic010G228100--Sobic010G096100 Sobic001G479800 Sobic001G479800 Sobic001G348900--Sobic001G479800 Sobic001G089100 Sobic001G089100 Sobic001G348900--Sobic001G089100 Sobic009G026200 Sobic009G026200 Sobic001G348900--Sobic009G026200 Sobic006G213100 Sobic006G213100 Sobic001G348900--Sobic006G213100 Sobic006G133600 Sobic006G133600 Sobic001G348900--Sobic006G133600 Sobic001G516500 Sobic001G516500 Sobic001G348900--Sobic001G516500 Sobic008G174800 Sobic008G174800 Sobic001G348900--Sobic008G174800 Sobic003G151300 Sobic003G151300 Sobic001G348900--Sobic003G151300 Sobic009G214600 Sobic009G214600 Sobic001G348900--Sobic009G214600
Octagon: transcription factors


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