Gene annotation
Transcriptome id Sobic.003G034000.1
Synonym NDL1, Sb03g003080
Functional annotation pollen-specific protein SF21, putative, expressed
UniProt C5XLY4
Pfam PF03096
Panther DB PTHR11034 PTHR11034:SF28
NCBI CDD KOG2931; Differentiation-related gene 1 protein (NDR1 protein), related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56750 : N-MYC downregulated-like 1
RAP-DB (Rice) LOC_Os01g09670.1 : pollen-specific protein SF21, putative, expressed
MaizeGDB (Corn) Zm00025a035797 , Zm00025a023036
Brachypodium KQK03134 , KQK03135
Barley -
Wheat TraesCS3D02G109000 , TraesCS3A02G106700 , TraesCS3A02G106700 , TraesCS3D02G109000
Populus -


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cDNA sequences
Sobic.003G034000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G176800 acyl carrier protein, putative, expressed -
2 Sobic.006G274400 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.001G261549 - -
4 Sobic.009G242700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsCML14 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
5 Sobic.001G399900 COBRA-like protein 7 precursor, putative, expressed -
6 Sobic.003G094600 glycosyltransferase protein, putative, expressed -
7 Sobic.002G360301 - -
8 Sobic.002G128800 fiber protein Fb34, putative, expressed -
9 Sobic.001G533000 expressed protein -
10 Sobic.006G278100 expressed protein -
11 Sobic.003G389100 formin-like protein 1 precursor, putative, expressed -
12 Sobic.007G214700 fasciclin domain containing protein, expressed -
13 Sobic.010G230000 monocopper oxidase, putative, expressed -
14 Sobic.002G385400 ORC6 - Putative origin recognition complex subunit 6, expressed K02608: origin recognition complex subunit 6
15 Sobic.001G042500 expressed protein -
16 Sobic.001G429000 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.006G251200 proton-dependent oligopeptide transport, putative, expressed -
18 Sobic.010G246400 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
19 Sobic.001G347901 - -
20 Sobic.009G194900 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed -


Gene co-expression network
sample Sobic003G034000 Sobic003G034000 Sobic007G176800 Sobic007G176800 Sobic003G034000--Sobic007G176800 Sobic006G274400 Sobic006G274400 Sobic003G034000--Sobic006G274400 Sobic001G261549 Sobic001G261549 Sobic003G034000--Sobic001G261549 Sobic009G242700 Sobic009G242700 Sobic003G034000--Sobic009G242700 Sobic001G399900 Sobic001G399900 Sobic003G034000--Sobic001G399900 Sobic003G094600 Sobic003G094600 Sobic003G034000--Sobic003G094600 Sobic002G360301 Sobic002G360301 Sobic003G034000--Sobic002G360301 Sobic002G128800 Sobic002G128800 Sobic003G034000--Sobic002G128800 Sobic001G533000 Sobic001G533000 Sobic003G034000--Sobic001G533000 Sobic006G134900 Sobic006G134900 Sobic007G176800--Sobic006G134900 Sobic003G442300 Sobic003G442300 Sobic007G176800--Sobic003G442300 Sobic007G176800--Sobic001G261549 Sobic009G189200 Sobic009G189200 Sobic007G176800--Sobic009G189200 Sobic007G214700 Sobic007G214700 Sobic007G176800--Sobic007G214700 Sobic010G230000 Sobic010G230000 Sobic007G176800--Sobic010G230000 Sobic004G355500 Sobic004G355500 Sobic007G176800--Sobic004G355500 Sobic005G047000 Sobic005G047000 Sobic007G176800--Sobic005G047000 Sobic001G169800 Sobic001G169800 Sobic007G176800--Sobic001G169800 Sobic006G070298 Sobic006G070298 Sobic006G274400--Sobic006G070298 Sobic006G159600 Sobic006G159600 Sobic006G274400--Sobic006G159600 Sobic002G385400 Sobic002G385400 Sobic006G274400--Sobic002G385400 Sobic001G464900 Sobic001G464900 Sobic006G274400--Sobic001G464900 Sobic002G051700 Sobic002G051700 Sobic006G274400--Sobic002G051700 Sobic001G399300 Sobic001G399300 Sobic006G274400--Sobic001G399300 Sobic001G162800 Sobic001G162800 Sobic006G274400--Sobic001G162800 Sobic006G274400--Sobic001G399900 Sobic006G274400--Sobic009G242700 Sobic006G102900 Sobic006G102900 Sobic001G261549--Sobic006G102900 Sobic004G285900 Sobic004G285900 Sobic001G261549--Sobic004G285900 Sobic001G261549--Sobic009G189200 Sobic006G191700 Sobic006G191700 Sobic001G261549--Sobic006G191700 Sobic009G194900 Sobic009G194900 Sobic001G261549--Sobic009G194900 Sobic003G107200 Sobic003G107200 Sobic001G261549--Sobic003G107200 Sobic001G078600 Sobic001G078600 Sobic001G261549--Sobic001G078600 Sobic007G154500 Sobic007G154500 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200 Sobic009G242700--Sobic001G399900 Sobic001G321800 Sobic001G321800 Sobic009G242700--Sobic001G321800 Sobic009G242700--Sobic006G274400 Sobic006G158200 Sobic006G158200 Sobic009G242700--Sobic006G158200 Sobic001G138200 Sobic001G138200 Sobic009G242700--Sobic001G138200 Sobic002G418000 Sobic002G418000 Sobic009G242700--Sobic002G418000 Sobic006G205600 Sobic006G205600 Sobic009G242700--Sobic006G205600 Sobic009G242700--Sobic006G070298 Sobic010G234000 Sobic010G234000 Sobic009G242700--Sobic010G234000 Sobic001G399900--Sobic009G242700 Sobic001G399900--Sobic001G138200 Sobic001G399900--Sobic002G418000 Sobic001G322200 Sobic001G322200 Sobic001G399900--Sobic001G322200 Sobic001G399900--Sobic006G274400 Sobic004G246600 Sobic004G246600 Sobic001G399900--Sobic004G246600 Sobic004G286800 Sobic004G286800 Sobic001G399900--Sobic004G286800 Sobic001G219200 Sobic001G219200 Sobic001G399900--Sobic001G219200 Sobic001G399900--Sobic006G158200 Sobic002G347900 Sobic002G347900 Sobic003G094600--Sobic002G347900 Sobic004G331900 Sobic004G331900 Sobic003G094600--Sobic004G331900 Sobic003G410700 Sobic003G410700 Sobic003G094600--Sobic003G410700 Sobic003G389100 Sobic003G389100 Sobic003G094600--Sobic003G389100 Sobic003G094600--Sobic003G442300 Sobic002G128000 Sobic002G128000 Sobic003G094600--Sobic002G128000 Sobic007G196800 Sobic007G196800 Sobic003G094600--Sobic007G196800 Sobic003G240100 Sobic003G240100 Sobic003G094600--Sobic003G240100 Sobic009G194200 Sobic009G194200 Sobic003G094600--Sobic009G194200 Sobic006G278100 Sobic006G278100 Sobic002G360301--Sobic006G278100 Sobic002G360301--Sobic007G214700 Sobic009G232200 Sobic009G232200 Sobic002G360301--Sobic009G232200 Sobic003G135400 Sobic003G135400 Sobic002G360301--Sobic003G135400 Sobic001G108400 Sobic001G108400 Sobic002G360301--Sobic001G108400 Sobic002G360301--Sobic004G355500 Sobic002G360301--Sobic007G176800 Sobic007G194600 Sobic007G194600 Sobic002G360301--Sobic007G194600 Sobic002G258300 Sobic002G258300 Sobic002G360301--Sobic002G258300 Sobic002G252000 Sobic002G252000 Sobic002G128800--Sobic002G252000 Sobic007G150800 Sobic007G150800 Sobic002G128800--Sobic007G150800 Sobic001G418100 Sobic001G418100 Sobic002G128800--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G128800--Sobic002G396400 Sobic001G475500 Sobic001G475500 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic006G156000 Sobic006G156000 Sobic002G128800--Sobic006G156000 Sobic003G219800 Sobic003G219800 Sobic002G128800--Sobic003G219800 Sobic003G443300 Sobic003G443300 Sobic002G128800--Sobic003G443300 Sobic003G379600 Sobic003G379600 Sobic001G533000--Sobic003G379600 Sobic006G137800 Sobic006G137800 Sobic001G533000--Sobic006G137800 Sobic004G345500 Sobic004G345500 Sobic001G533000--Sobic004G345500 Sobic007G198000 Sobic007G198000 Sobic001G533000--Sobic007G198000 Sobic001G529400 Sobic001G529400 Sobic001G533000--Sobic001G529400 Sobic003G078200 Sobic003G078200 Sobic001G533000--Sobic003G078200 Sobic010G047100 Sobic010G047100 Sobic001G533000--Sobic010G047100 Sobic004G171400 Sobic004G171400 Sobic001G533000--Sobic004G171400 Sobic003G160700 Sobic003G160700 Sobic001G533000--Sobic003G160700
Octagon: transcription factors


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