Gene annotation
Transcriptome id Sobic.003G054900.1
Synonym Sb03g004710
Functional annotation KIP1, putative, expressed
UniProt C5XNH4
Pfam PF07765
Panther DB PTHR32258 PTHR32258:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30500 : Kinase interacting (KIP1-like) family protein
RAP-DB (Rice) LOC_Os01g07360.3 : KIP1, putative, expressed
MaizeGDB (Corn) Zm00025a023302
Brachypodium KQK02860
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G217700 gamma-soluble NSF attachment protein, putative, expressed -
2 Sobic.007G148800 cupin superfamily protein, putative, expressed K09705: uncharacterized protein
3 Sobic.003G259700 transmembrane protein 93, putative, expressed -
4 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
5 Sobic.010G080200 emp24/gp25L/p24 family protein, putative, expressed -
6 Sobic.009G238800 expressed protein -
7 Sobic.007G148700 exo70 exocyst complex subunit, putative, expressed -
8 Sobic.003G021200 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
9 Sobic.010G046300 rRNA-processing protein FCF, putative, expressed K14566: UTP24, U3 small nucleolar RNA-associated protein 24
10 Sobic.002G113800 spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
11 Sobic.004G347300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
12 Sobic.005G139400 SNARE associated Golgi protein, putative, expressed -
13 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
14 Sobic.002G202400 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
15 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
16 Sobic.003G047100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K12261: 2-hydroxyacyl-CoA lyase 1
17 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
18 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
19 Sobic.009G088100 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.006G114400 OsGrx_S15.2 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin


Gene co-expression network
sample Sobic003G054900 Sobic003G054900 Sobic006G217700 Sobic006G217700 Sobic003G054900--Sobic006G217700 Sobic007G148800 Sobic007G148800 Sobic003G054900--Sobic007G148800 Sobic003G259700 Sobic003G259700 Sobic003G054900--Sobic003G259700 Sobic001G010400 Sobic001G010400 Sobic003G054900--Sobic001G010400 Sobic010G080200 Sobic010G080200 Sobic003G054900--Sobic010G080200 Sobic009G238800 Sobic009G238800 Sobic003G054900--Sobic009G238800 Sobic007G148700 Sobic007G148700 Sobic003G054900--Sobic007G148700 Sobic003G021200 Sobic003G021200 Sobic003G054900--Sobic003G021200 Sobic010G046300 Sobic010G046300 Sobic003G054900--Sobic010G046300 Sobic010G017000 Sobic010G017000 Sobic006G217700--Sobic010G017000 Sobic006G217700--Sobic009G238800 Sobic001G323000 Sobic001G323000 Sobic006G217700--Sobic001G323000 Sobic010G016400 Sobic010G016400 Sobic006G217700--Sobic010G016400 Sobic004G054300 Sobic004G054300 Sobic006G217700--Sobic004G054300 Sobic004G132300 Sobic004G132300 Sobic006G217700--Sobic004G132300 Sobic001G057800 Sobic001G057800 Sobic006G217700--Sobic001G057800 Sobic001G033500 Sobic001G033500 Sobic006G217700--Sobic001G033500 Sobic006G217700--Sobic007G148800 Sobic007G148800--Sobic001G010400 Sobic007G148800--Sobic010G016400 Sobic007G148800--Sobic006G217700 Sobic004G185900 Sobic004G185900 Sobic007G148800--Sobic004G185900 Sobic007G148800--Sobic007G148700 Sobic005G139400 Sobic005G139400 Sobic007G148800--Sobic005G139400 Sobic006G140000 Sobic006G140000 Sobic007G148800--Sobic006G140000 Sobic004G347300 Sobic004G347300 Sobic007G148800--Sobic004G347300 Sobic002G113800 Sobic002G113800 Sobic007G148800--Sobic002G113800 Sobic003G259700--Sobic002G113800 Sobic003G259700--Sobic001G010400 Sobic003G259700--Sobic010G046300 Sobic001G481700 Sobic001G481700 Sobic003G259700--Sobic001G481700 Sobic003G047100 Sobic003G047100 Sobic003G259700--Sobic003G047100 Sobic010G044200 Sobic010G044200 Sobic003G259700--Sobic010G044200 Sobic007G142500 Sobic007G142500 Sobic003G259700--Sobic007G142500 Sobic004G224900 Sobic004G224900 Sobic003G259700--Sobic004G224900 Sobic006G114400 Sobic006G114400 Sobic003G259700--Sobic006G114400 Sobic002G249000 Sobic002G249000 Sobic001G010400--Sobic002G249000 Sobic001G010400--Sobic007G148800 Sobic001G010400--Sobic004G185900 Sobic001G010400--Sobic002G113800 Sobic001G393800 Sobic001G393800 Sobic001G010400--Sobic001G393800 Sobic002G258100 Sobic002G258100 Sobic001G010400--Sobic002G258100 Sobic002G180600 Sobic002G180600 Sobic001G010400--Sobic002G180600 Sobic008G107500 Sobic008G107500 Sobic001G010400--Sobic008G107500 Sobic001G010400--Sobic010G016400 Sobic001G051200 Sobic001G051200 Sobic010G080200--Sobic001G051200 Sobic010G080200--Sobic009G238800 Sobic002G281300 Sobic002G281300 Sobic010G080200--Sobic002G281300 Sobic010G080200--Sobic006G217700 Sobic005G155700 Sobic005G155700 Sobic010G080200--Sobic005G155700 Sobic010G080200--Sobic001G033500 Sobic010G080200--Sobic001G057800 Sobic002G202400 Sobic002G202400 Sobic010G080200--Sobic002G202400 Sobic010G205300 Sobic010G205300 Sobic010G080200--Sobic010G205300 Sobic009G238800--Sobic010G080200 Sobic006G232000 Sobic006G232000 Sobic009G238800--Sobic006G232000 Sobic009G238800--Sobic006G217700 Sobic009G238800--Sobic001G033500 Sobic002G376300 Sobic002G376300 Sobic009G238800--Sobic002G376300 Sobic006G148200 Sobic006G148200 Sobic009G238800--Sobic006G148200 Sobic001G048700 Sobic001G048700 Sobic009G238800--Sobic001G048700 Sobic001G067900 Sobic001G067900 Sobic009G238800--Sobic001G067900 Sobic001G206900 Sobic001G206900 Sobic009G238800--Sobic001G206900 Sobic007G148700--Sobic006G217700 Sobic007G148700--Sobic010G016400 Sobic007G148700--Sobic007G148800 Sobic003G321300 Sobic003G321300 Sobic007G148700--Sobic003G321300 Sobic003G052400 Sobic003G052400 Sobic007G148700--Sobic003G052400 Sobic007G148700--Sobic010G017000 Sobic001G237500 Sobic001G237500 Sobic007G148700--Sobic001G237500 Sobic001G403700 Sobic001G403700 Sobic007G148700--Sobic001G403700 Sobic007G148700--Sobic009G238800 Sobic001G010700 Sobic001G010700 Sobic003G021200--Sobic001G010700 Sobic006G222400 Sobic006G222400 Sobic003G021200--Sobic006G222400 Sobic003G021200--Sobic010G017000 Sobic003G043400 Sobic003G043400 Sobic003G021200--Sobic003G043400 Sobic004G335000 Sobic004G335000 Sobic003G021200--Sobic004G335000 Sobic001G402300 Sobic001G402300 Sobic003G021200--Sobic001G402300 Sobic002G428200 Sobic002G428200 Sobic003G021200--Sobic002G428200 Sobic010G238700 Sobic010G238700 Sobic003G021200--Sobic010G238700 Sobic006G127000 Sobic006G127000 Sobic003G021200--Sobic006G127000 Sobic010G046300--Sobic001G481700 Sobic010G151000 Sobic010G151000 Sobic010G046300--Sobic010G151000 Sobic008G073300 Sobic008G073300 Sobic010G046300--Sobic008G073300 Sobic010G046300--Sobic002G113800 Sobic007G045600 Sobic007G045600 Sobic010G046300--Sobic007G045600 Sobic005G003800 Sobic005G003800 Sobic010G046300--Sobic005G003800 Sobic007G118000 Sobic007G118000 Sobic010G046300--Sobic007G118000 Sobic006G220700 Sobic006G220700 Sobic010G046300--Sobic006G220700 Sobic010G046300--Sobic004G224900
Octagon: transcription factors


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