Gene annotation
Transcriptome id Sobic.003G060300.3,Sobic.003G060300.1,Sobic.003G060300.2
Synonym ERO1, AERO1, Sb03g005166
Functional annotation endoplasmic oxidoreductin-1 precursor, putative, expressed
UniProt A0A1B6Q1N8 , A0A1W0VVZ1 , C5XP64
Pfam PF04137
Panther DB PTHR12613 PTHR12613:SF0
NCBI CDD KOG2608; Endoplasmic reticulum membrane-associated oxidoreductin involved in disulfide bond formation
KEGG Orthology K10950; ERO1-like protein alpha
Gene Ontology GO:0016671; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GO:0005783endoplasmic reticulum GO:0003756protein disulfide isomerase activity


Orthologs (automatic annotation)
TAIR AT1G72280 : endoplasmic reticulum oxidoreductins 1
RAP-DB (Rice) LOC_Os03g52340.1 : endoplasmic oxidoreductin-1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a008031 , Zm00025a016870
Brachypodium KQJ84103 , PNT61685 , PNT61684 , KQJ84105 , KQJ84104 , KQK13367
Barley HORVU4Hr1G010650.4 , HORVU4Hr1G010650.5 , HORVU4Hr1G010650.2 , HORVU4Hr1G010650.3 , HORVU4Hr1G010650.1
Wheat TraesCS4A02G250800
Populus -


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cDNA sequences
Sobic.003G060300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G374500 pentatricopeptide repeat domain containing protein, putative, expressed -
2 Sobic.005G229800 expressed protein -
3 Sobic.005G079700 expressed protein -
4 Sobic.010G101700 - -
5 Sobic.010G033700 - -
6 Sobic.004G289600 - -
7 Sobic.001G278600 - -
8 Sobic.008G065400 - -
9 Sobic.002G387200 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12900: FUS-interacting serine-arginine-rich protein 1
10 Sobic.008G000800 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
11 Sobic.003G366850 - -
12 Sobic.003G432900 RNA recognition motif containing protein, putative, expressed -
13 Sobic.007G064250 - -
14 Sobic.001G184500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR55 - Auxin-responsive SAUR gene family member, expressed -
15 Sobic.001G055900 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
16 Sobic.007G010000 OsFBL6 - F-box domain and LRR containing protein, expressed -
17 Sobic.001G326100 expressed protein -
18 Sobic.005G207100 dnaJ domain containing protein, expressed -
19 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
20 Sobic.003G112600 endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha


Gene co-expression network
sample Sobic003G060300 Sobic003G060300 Sobic003G374500 Sobic003G374500 Sobic003G060300--Sobic003G374500 Sobic005G229800 Sobic005G229800 Sobic003G060300--Sobic005G229800 Sobic005G079700 Sobic005G079700 Sobic003G060300--Sobic005G079700 Sobic010G101700 Sobic010G101700 Sobic003G060300--Sobic010G101700 Sobic010G033700 Sobic010G033700 Sobic003G060300--Sobic010G033700 Sobic004G289600 Sobic004G289600 Sobic003G060300--Sobic004G289600 Sobic001G278600 Sobic001G278600 Sobic003G060300--Sobic001G278600 Sobic008G065400 Sobic008G065400 Sobic003G060300--Sobic008G065400 Sobic002G387200 Sobic002G387200 Sobic003G060300--Sobic002G387200 Sobic003G374500--Sobic008G065400 Sobic003G374500--Sobic001G278600 Sobic003G366850 Sobic003G366850 Sobic003G374500--Sobic003G366850 Sobic007G037301 Sobic007G037301 Sobic003G374500--Sobic007G037301 Sobic003G374500--Sobic005G079700 Sobic001G140200 Sobic001G140200 Sobic003G374500--Sobic001G140200 Sobic001G262900 Sobic001G262900 Sobic003G374500--Sobic001G262900 Sobic003G266700 Sobic003G266700 Sobic003G374500--Sobic003G266700 Sobic002G431200 Sobic002G431200 Sobic003G374500--Sobic002G431200 Sobic005G229800--Sobic003G060300 Sobic008G000800 Sobic008G000800 Sobic005G229800--Sobic008G000800 Sobic003G347300 Sobic003G347300 Sobic005G229800--Sobic003G347300 Sobic006G068400 Sobic006G068400 Sobic005G229800--Sobic006G068400 Sobic001G326100 Sobic001G326100 Sobic005G229800--Sobic001G326100 Sobic001G018100 Sobic001G018100 Sobic005G229800--Sobic001G018100 Sobic004G045566 Sobic004G045566 Sobic005G229800--Sobic004G045566 Sobic001G021500 Sobic001G021500 Sobic005G229800--Sobic001G021500 Sobic005G204800 Sobic005G204800 Sobic005G229800--Sobic005G204800 Sobic005G079700--Sobic008G065400 Sobic008G106400 Sobic008G106400 Sobic005G079700--Sobic008G106400 Sobic006G249200 Sobic006G249200 Sobic005G079700--Sobic006G249200 Sobic005G079700--Sobic002G431200 Sobic005G079700--Sobic001G140200 Sobic005G079700--Sobic003G374500 Sobic009G159300 Sobic009G159300 Sobic005G079700--Sobic009G159300 Sobic009G121750 Sobic009G121750 Sobic005G079700--Sobic009G121750 Sobic008G044750 Sobic008G044750 Sobic005G079700--Sobic008G044750 Sobic001G184500 Sobic001G184500 Sobic010G101700--Sobic001G184500 Sobic010G101700--Sobic001G278600 Sobic003G351150 Sobic003G351150 Sobic010G101700--Sobic003G351150 Sobic009G157500 Sobic009G157500 Sobic010G101700--Sobic009G157500 Sobic010G101700--Sobic003G266700 Sobic010G101700--Sobic008G065400 Sobic002G079801 Sobic002G079801 Sobic010G101700--Sobic002G079801 Sobic002G224450 Sobic002G224450 Sobic010G101700--Sobic002G224450 Sobic007G005000 Sobic007G005000 Sobic010G101700--Sobic007G005000 Sobic005G096800 Sobic005G096800 Sobic010G033700--Sobic005G096800 Sobic010G033700--Sobic004G289600 Sobic010G139301 Sobic010G139301 Sobic010G033700--Sobic010G139301 Sobic002G182150 Sobic002G182150 Sobic010G033700--Sobic002G182150 Sobic010G033700--Sobic005G079700 Sobic004G204400 Sobic004G204400 Sobic010G033700--Sobic004G204400 Sobic010G033700--Sobic008G065400 Sobic004G132100 Sobic004G132100 Sobic010G033700--Sobic004G132100 Sobic010G033700--Sobic003G374500 Sobic008G065800 Sobic008G065800 Sobic004G289600--Sobic008G065800 Sobic008G125600 Sobic008G125600 Sobic004G289600--Sobic008G125600 Sobic001G022100 Sobic001G022100 Sobic004G289600--Sobic001G022100 Sobic003G020600 Sobic003G020600 Sobic004G289600--Sobic003G020600 Sobic004G289600--Sobic006G068400 Sobic004G289600--Sobic010G033700 Sobic009G067501 Sobic009G067501 Sobic004G289600--Sobic009G067501 Sobic008G106600 Sobic008G106600 Sobic004G289600--Sobic008G106600 Sobic008G189400 Sobic008G189400 Sobic004G289600--Sobic008G189400 Sobic001G278600--Sobic008G065400 Sobic001G278600--Sobic010G101700 Sobic001G278600--Sobic003G266700 Sobic001G278600--Sobic003G374500 Sobic001G278600--Sobic003G366850 Sobic001G278600--Sobic009G159300 Sobic004G121000 Sobic004G121000 Sobic001G278600--Sobic004G121000 Sobic001G278600--Sobic003G351150 Sobic002G171400 Sobic002G171400 Sobic001G278600--Sobic002G171400 Sobic008G065400--Sobic001G278600 Sobic008G065400--Sobic002G431200 Sobic008G065400--Sobic003G366850 Sobic008G065400--Sobic003G374500 Sobic008G065400--Sobic005G079700 Sobic008G065400--Sobic003G266700 Sobic008G065400--Sobic008G106400 Sobic008G065400--Sobic002G171400 Sobic003G429500 Sobic003G429500 Sobic008G065400--Sobic003G429500 Sobic003G198150 Sobic003G198150 Sobic002G387200--Sobic003G198150 Sobic003G198200 Sobic003G198200 Sobic002G387200--Sobic003G198200 Sobic001G110900 Sobic001G110900 Sobic002G387200--Sobic001G110900 Sobic002G110300 Sobic002G110300 Sobic002G387200--Sobic002G110300 Sobic002G387200--Sobic001G140200 Sobic002G387200--Sobic002G079801 Sobic002G387200--Sobic003G374500 Sobic004G337900 Sobic004G337900 Sobic002G387200--Sobic004G337900 Sobic009G183000 Sobic009G183000 Sobic002G387200--Sobic009G183000
Octagon: transcription factors


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