Gene annotation
Transcriptome id Sobic.003G097400.1
Synonym
Functional annotation -
UniProt A0A1B6Q2C7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G008300 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
2 Sobic.010G117500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
3 Sobic.009G177000 transmembrane protein 56, putative, expressed -
4 Sobic.004G008900 Sphingoid base hydroxylase 2 SBH2 (At)(PubMedID : 27208977)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
5 Sobic.003G204400 hypothetical protein -
6 Sobic.005G110514 - -
7 Sobic.002G196000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.005G131200 - -
9 Sobic.001G482000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
10 Sobic.003G204300 expressed protein -
11 Sobic.010G126800 lectin-like receptor kinase 7, putative, expressed -
12 Sobic.006G168100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.005G066200 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.004G121800 expansin precursor, putative, expressed -
15 Sobic.001G299100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
16 Sobic.009G076300 expressed protein -
17 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.003G161400 powdery mildew resistance protein PM3A, putative, expressed -
19 Sobic.007G186500 resistance protein, putative, expressed -
20 Sobic.001G326400 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G097400 Sobic003G097400 Sobic004G008300 Sobic004G008300 Sobic003G097400--Sobic004G008300 Sobic010G117500 Sobic010G117500 Sobic003G097400--Sobic010G117500 Sobic009G177000 Sobic009G177000 Sobic003G097400--Sobic009G177000 Sobic004G008900 Sobic004G008900 Sobic003G097400--Sobic004G008900 Sobic003G204400 Sobic003G204400 Sobic003G097400--Sobic003G204400 Sobic005G110514 Sobic005G110514 Sobic003G097400--Sobic005G110514 Sobic002G196000 Sobic002G196000 Sobic003G097400--Sobic002G196000 Sobic005G131200 Sobic005G131200 Sobic003G097400--Sobic005G131200 Sobic001G482000 Sobic001G482000 Sobic003G097400--Sobic001G482000 Sobic003G204300 Sobic003G204300 Sobic004G008300--Sobic003G204300 Sobic005G066200 Sobic005G066200 Sobic004G008300--Sobic005G066200 Sobic009G004950 Sobic009G004950 Sobic004G008300--Sobic009G004950 Sobic004G008300--Sobic003G204400 Sobic009G076300 Sobic009G076300 Sobic004G008300--Sobic009G076300 Sobic010G126800 Sobic010G126800 Sobic004G008300--Sobic010G126800 Sobic004G008300--Sobic009G177000 Sobic004G008300--Sobic010G117500 Sobic007G119750 Sobic007G119750 Sobic004G008300--Sobic007G119750 Sobic010G117500--Sobic003G204400 Sobic010G117500--Sobic004G008300 Sobic010G117500--Sobic004G008900 Sobic010G117500--Sobic003G204300 Sobic010G117500--Sobic009G076300 Sobic010G117800 Sobic010G117800 Sobic010G117500--Sobic010G117800 Sobic005G216200 Sobic005G216200 Sobic010G117500--Sobic005G216200 Sobic006G168100 Sobic006G168100 Sobic010G117500--Sobic006G168100 Sobic010G117500--Sobic003G097400 Sobic009G177000--Sobic005G066200 Sobic009G177000--Sobic004G008300 Sobic009G177000--Sobic010G126800 Sobic005G197350 Sobic005G197350 Sobic009G177000--Sobic005G197350 Sobic009G177000--Sobic003G204300 Sobic009G177000--Sobic007G119750 Sobic009G177000--Sobic003G204400 Sobic009G177000--Sobic009G076300 Sobic005G066366 Sobic005G066366 Sobic009G177000--Sobic005G066366 Sobic004G008900--Sobic010G117500 Sobic004G008900--Sobic003G204400 Sobic004G008900--Sobic004G008300 Sobic004G008900--Sobic003G204300 Sobic010G126900 Sobic010G126900 Sobic004G008900--Sobic010G126900 Sobic004G008900--Sobic003G097400 Sobic004G008900--Sobic009G076300 Sobic004G008900--Sobic005G216200 Sobic004G008900--Sobic010G126800 Sobic003G204400--Sobic010G117500 Sobic003G204400--Sobic004G008300 Sobic003G204400--Sobic009G076300 Sobic003G204400--Sobic010G126800 Sobic003G204400--Sobic003G204300 Sobic003G441700 Sobic003G441700 Sobic003G204400--Sobic003G441700 Sobic004G121800 Sobic004G121800 Sobic003G204400--Sobic004G121800 Sobic005G216400 Sobic005G216400 Sobic003G204400--Sobic005G216400 Sobic003G204400--Sobic004G008900 Sobic004G003100 Sobic004G003100 Sobic005G110514--Sobic004G003100 Sobic004G308500 Sobic004G308500 Sobic005G110514--Sobic004G308500 Sobic009G233100 Sobic009G233100 Sobic005G110514--Sobic009G233100 Sobic009G106100 Sobic009G106100 Sobic005G110514--Sobic009G106100 Sobic003G007400 Sobic003G007400 Sobic005G110514--Sobic003G007400 Sobic007G186500 Sobic007G186500 Sobic005G110514--Sobic007G186500 Sobic001G506800 Sobic001G506800 Sobic005G110514--Sobic001G506800 Sobic005G216600 Sobic005G216600 Sobic005G110514--Sobic005G216600 Sobic004G121600 Sobic004G121600 Sobic005G110514--Sobic004G121600 Sobic008G010500 Sobic008G010500 Sobic002G196000--Sobic008G010500 Sobic002G196000--Sobic004G121800 Sobic010G214300 Sobic010G214300 Sobic002G196000--Sobic010G214300 Sobic001G272800 Sobic001G272800 Sobic002G196000--Sobic001G272800 Sobic001G231800 Sobic001G231800 Sobic002G196000--Sobic001G231800 Sobic002G196000--Sobic004G121600 Sobic002G196000--Sobic003G007400 Sobic001G342000 Sobic001G342000 Sobic002G196000--Sobic001G342000 Sobic002G196000--Sobic007G186500 Sobic008G035700 Sobic008G035700 Sobic005G131200--Sobic008G035700 Sobic005G066300 Sobic005G066300 Sobic005G131200--Sobic005G066300 Sobic006G229100 Sobic006G229100 Sobic005G131200--Sobic006G229100 Sobic005G131200--Sobic005G197350 Sobic010G096700 Sobic010G096700 Sobic005G131200--Sobic010G096700 Sobic005G131200--Sobic005G066200 Sobic001G506700 Sobic001G506700 Sobic005G131200--Sobic001G506700 Sobic002G411000 Sobic002G411000 Sobic005G131200--Sobic002G411000 Sobic001G506600 Sobic001G506600 Sobic005G131200--Sobic001G506600 Sobic001G482000--Sobic007G186500 Sobic005G206000 Sobic005G206000 Sobic001G482000--Sobic005G206000 Sobic010G013000 Sobic010G013000 Sobic001G482000--Sobic010G013000 Sobic010G268700 Sobic010G268700 Sobic001G482000--Sobic010G268700 Sobic001G482000--Sobic008G010500 Sobic001G482000--Sobic009G076300 Sobic001G301000 Sobic001G301000 Sobic001G482000--Sobic001G301000 Sobic001G482000--Sobic001G231800 Sobic002G025500 Sobic002G025500 Sobic001G482000--Sobic002G025500
Octagon: transcription factors


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