Gene annotation
Transcriptome id Sobic.003G169500.1,Sobic.003G169500.2
Synonym
Functional annotation agenet domain containing protein, putative, expressed
UniProt A0A1W0VXM9 , A0A1B6Q3Q6
Pfam PF05641
Panther DB PTHR36805
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42670 : Agenet domain-containing protein
RAP-DB (Rice) LOC_Os05g04860.2,LOC_Os05g04860.1 : agenet domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3B02G509700 , TraesCS3B02G509700
Populus -


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cDNA sequences
Sobic.003G169500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
2 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
3 Sobic.007G093800 expressed protein -
4 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
5 Sobic.001G281100 START domain containing protein, expressed -
6 Sobic.010G279800 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
7 Sobic.001G382600 expressed protein -
8 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
9 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
10 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
11 Sobic.004G344901 - K10357: myosin V
12 Sobic.009G109925 - -
13 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
14 Sobic.008G089100 armadillo/beta-catenin repeat family protein, putative, expressed -
15 Sobic.001G440800 myb/SANT domain protein, putative, expressed -
16 Sobic.010G228400 zinc finger, C3HC4 type, domain containing protein, expressed -
17 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -
18 Sobic.003G313500 MATH domain containing protein, expressed -
19 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
20 Sobic.006G034500 elongation factor Tu, putative, expressed K03267: ERF3, peptide chain release factor subunit 3


Gene co-expression network
sample Sobic003G169500 Sobic003G169500 Sobic004G178200 Sobic004G178200 Sobic003G169500--Sobic004G178200 Sobic002G008800 Sobic002G008800 Sobic003G169500--Sobic002G008800 Sobic007G093800 Sobic007G093800 Sobic003G169500--Sobic007G093800 Sobic003G337300 Sobic003G337300 Sobic003G169500--Sobic003G337300 Sobic001G281100 Sobic001G281100 Sobic003G169500--Sobic001G281100 Sobic010G279800 Sobic010G279800 Sobic003G169500--Sobic010G279800 Sobic001G382600 Sobic001G382600 Sobic003G169500--Sobic001G382600 Sobic001G390800 Sobic001G390800 Sobic003G169500--Sobic001G390800 Sobic001G096000 Sobic001G096000 Sobic003G169500--Sobic001G096000 Sobic007G132100 Sobic007G132100 Sobic004G178200--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic004G178200--Sobic007G218000 Sobic006G136400 Sobic006G136400 Sobic004G178200--Sobic006G136400 Sobic006G131000 Sobic006G131000 Sobic004G178200--Sobic006G131000 Sobic006G126100 Sobic006G126100 Sobic004G178200--Sobic006G126100 Sobic006G012500 Sobic006G012500 Sobic004G178200--Sobic006G012500 Sobic010G116600 Sobic010G116600 Sobic004G178200--Sobic010G116600 Sobic002G303600 Sobic002G303600 Sobic004G178200--Sobic002G303600 Sobic004G039600 Sobic004G039600 Sobic004G178200--Sobic004G039600 Sobic010G261600 Sobic010G261600 Sobic002G008800--Sobic010G261600 Sobic010G020400 Sobic010G020400 Sobic002G008800--Sobic010G020400 Sobic002G262900 Sobic002G262900 Sobic002G008800--Sobic002G262900 Sobic010G223300 Sobic010G223300 Sobic002G008800--Sobic010G223300 Sobic002G008800--Sobic001G382600 Sobic004G177300 Sobic004G177300 Sobic002G008800--Sobic004G177300 Sobic004G275700 Sobic004G275700 Sobic002G008800--Sobic004G275700 Sobic001G333100 Sobic001G333100 Sobic002G008800--Sobic001G333100 Sobic008G055900 Sobic008G055900 Sobic002G008800--Sobic008G055900 Sobic008G124900 Sobic008G124900 Sobic007G093800--Sobic008G124900 Sobic007G093800--Sobic006G131000 Sobic007G093800--Sobic004G178200 Sobic009G068500 Sobic009G068500 Sobic007G093800--Sobic009G068500 Sobic008G046500 Sobic008G046500 Sobic007G093800--Sobic008G046500 Sobic010G278200 Sobic010G278200 Sobic007G093800--Sobic010G278200 Sobic003G264100 Sobic003G264100 Sobic007G093800--Sobic003G264100 Sobic004G092500 Sobic004G092500 Sobic007G093800--Sobic004G092500 Sobic007G093800--Sobic007G218000 Sobic003G104000 Sobic003G104000 Sobic003G337300--Sobic003G104000 Sobic010G004100 Sobic010G004100 Sobic003G337300--Sobic010G004100 Sobic002G137400 Sobic002G137400 Sobic003G337300--Sobic002G137400 Sobic003G337300--Sobic004G039600 Sobic003G337300--Sobic006G131000 Sobic004G344901 Sobic004G344901 Sobic003G337300--Sobic004G344901 Sobic004G322400 Sobic004G322400 Sobic003G337300--Sobic004G322400 Sobic003G332500 Sobic003G332500 Sobic003G337300--Sobic003G332500 Sobic001G415300 Sobic001G415300 Sobic003G337300--Sobic001G415300 Sobic001G534800 Sobic001G534800 Sobic001G281100--Sobic001G534800 Sobic004G004300 Sobic004G004300 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic005G026200 Sobic005G026200 Sobic001G281100--Sobic005G026200 Sobic008G099800 Sobic008G099800 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic010G275500 Sobic010G275500 Sobic001G281100--Sobic010G275500 Sobic010G148932 Sobic010G148932 Sobic010G279800--Sobic010G148932 Sobic002G042600 Sobic002G042600 Sobic010G279800--Sobic002G042600 Sobic008G098900 Sobic008G098900 Sobic010G279800--Sobic008G098900 Sobic002G430000 Sobic002G430000 Sobic010G279800--Sobic002G430000 Sobic001G117200 Sobic001G117200 Sobic010G279800--Sobic001G117200 Sobic010G279800--Sobic003G229500 Sobic010G279800--Sobic001G281100 Sobic006G040500 Sobic006G040500 Sobic010G279800--Sobic006G040500 Sobic004G135400 Sobic004G135400 Sobic010G279800--Sobic004G135400 Sobic002G299000 Sobic002G299000 Sobic001G382600--Sobic002G299000 Sobic001G382600--Sobic002G008800 Sobic001G065100 Sobic001G065100 Sobic001G382600--Sobic001G065100 Sobic001G118200 Sobic001G118200 Sobic001G382600--Sobic001G118200 Sobic002G111600 Sobic002G111600 Sobic001G382600--Sobic002G111600 Sobic001G382600--Sobic003G337300 Sobic002G020700 Sobic002G020700 Sobic001G382600--Sobic002G020700 Sobic001G382600--Sobic008G055900 Sobic001G382600--Sobic006G131000 Sobic001G268200 Sobic001G268200 Sobic001G390800--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic001G390800--Sobic001G121200 Sobic003G313500 Sobic003G313500 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G085300 Sobic001G085300 Sobic001G390800--Sobic001G085300 Sobic010G147100 Sobic010G147100 Sobic001G390800--Sobic010G147100 Sobic007G075400 Sobic007G075400 Sobic001G390800--Sobic007G075400 Sobic010G139600 Sobic010G139600 Sobic001G390800--Sobic010G139600 Sobic001G050200 Sobic001G050200 Sobic001G390800--Sobic001G050200 Sobic001G096000--Sobic006G131000 Sobic001G096000--Sobic008G124900 Sobic001G096000--Sobic006G126100 Sobic001G096000--Sobic003G332500 Sobic001G096000--Sobic003G104000 Sobic001G096000--Sobic003G337300 Sobic001G477700 Sobic001G477700 Sobic001G096000--Sobic001G477700 Sobic001G163400 Sobic001G163400 Sobic001G096000--Sobic001G163400 Sobic001G362200 Sobic001G362200 Sobic001G096000--Sobic001G362200
Octagon: transcription factors


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