Gene annotation
Transcriptome id Sobic.003G170032.1
Synonym -
Functional annotation -
UniProt A0A1W0VXN3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G148900 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
2 Sobic.001G046100 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
3 Sobic.003G282901 - -
4 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
6 Sobic.002G200600 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e
7 Sobic.001G423800 DNA binding protein, putative, expressed -
8 Sobic.010G150575 - -
9 Sobic.003G322400 40S ribosomal protein S25, putative, expressed K02975: RP-S25e, small subunit ribosomal protein S25e
10 Sobic.004G104300 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
11 Sobic.003G357300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.006G067800 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
13 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
14 Sobic.010G044001 - -
15 Sobic.003G152600 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
16 Sobic.002G251000 expressed protein -
17 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
18 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
19 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
20 Sobic.001G016400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e


Gene co-expression network
sample Sobic003G170032 Sobic003G170032 Sobic006G148900 Sobic006G148900 Sobic003G170032--Sobic006G148900 Sobic001G046100 Sobic001G046100 Sobic003G170032--Sobic001G046100 Sobic003G282901 Sobic003G282901 Sobic003G170032--Sobic003G282901 Sobic004G216600 Sobic004G216600 Sobic003G170032--Sobic004G216600 Sobic004G301000 Sobic004G301000 Sobic003G170032--Sobic004G301000 Sobic002G200600 Sobic002G200600 Sobic003G170032--Sobic002G200600 Sobic001G423800 Sobic001G423800 Sobic003G170032--Sobic001G423800 Sobic010G150575 Sobic010G150575 Sobic003G170032--Sobic010G150575 Sobic003G322400 Sobic003G322400 Sobic003G170032--Sobic003G322400 Sobic006G148900--Sobic001G423800 Sobic010G084700 Sobic010G084700 Sobic006G148900--Sobic010G084700 Sobic010G176600 Sobic010G176600 Sobic006G148900--Sobic010G176600 Sobic004G221500 Sobic004G221500 Sobic006G148900--Sobic004G221500 Sobic001G177800 Sobic001G177800 Sobic006G148900--Sobic001G177800 Sobic004G189400 Sobic004G189400 Sobic006G148900--Sobic004G189400 Sobic002G251000 Sobic002G251000 Sobic006G148900--Sobic002G251000 Sobic006G148900--Sobic003G282901 Sobic006G148900--Sobic004G216600 Sobic001G374700 Sobic001G374700 Sobic001G046100--Sobic001G374700 Sobic001G390300 Sobic001G390300 Sobic001G046100--Sobic001G390300 Sobic001G402050 Sobic001G402050 Sobic001G046100--Sobic001G402050 Sobic002G175100 Sobic002G175100 Sobic001G046100--Sobic002G175100 Sobic001G046100--Sobic003G322400 Sobic006G047400 Sobic006G047400 Sobic001G046100--Sobic006G047400 Sobic007G197800 Sobic007G197800 Sobic001G046100--Sobic007G197800 Sobic001G046100--Sobic001G177800 Sobic001G091801 Sobic001G091801 Sobic001G046100--Sobic001G091801 Sobic004G243100 Sobic004G243100 Sobic003G282901--Sobic004G243100 Sobic002G263400 Sobic002G263400 Sobic003G282901--Sobic002G263400 Sobic003G282901--Sobic002G251000 Sobic001G018300 Sobic001G018300 Sobic003G282901--Sobic001G018300 Sobic002G140400 Sobic002G140400 Sobic003G282901--Sobic002G140400 Sobic003G282901--Sobic001G423800 Sobic009G224100 Sobic009G224100 Sobic003G282901--Sobic009G224100 Sobic002G139400 Sobic002G139400 Sobic003G282901--Sobic002G139400 Sobic002G184200 Sobic002G184200 Sobic003G282901--Sobic002G184200 Sobic009G061200 Sobic009G061200 Sobic004G216600--Sobic009G061200 Sobic001G119400 Sobic001G119400 Sobic004G216600--Sobic001G119400 Sobic001G319600 Sobic001G319600 Sobic004G216600--Sobic001G319600 Sobic001G317200 Sobic001G317200 Sobic004G216600--Sobic001G317200 Sobic009G183400 Sobic009G183400 Sobic004G216600--Sobic009G183400 Sobic002G393000 Sobic002G393000 Sobic004G216600--Sobic002G393000 Sobic004G216600--Sobic004G221500 Sobic004G216600--Sobic001G423800 Sobic001G348700 Sobic001G348700 Sobic004G216600--Sobic001G348700 Sobic004G100700 Sobic004G100700 Sobic004G301000--Sobic004G100700 Sobic001G108200 Sobic001G108200 Sobic004G301000--Sobic001G108200 Sobic001G481100 Sobic001G481100 Sobic004G301000--Sobic001G481100 Sobic004G301000--Sobic001G423800 Sobic002G188900 Sobic002G188900 Sobic004G301000--Sobic002G188900 Sobic004G141200 Sobic004G141200 Sobic004G301000--Sobic004G141200 Sobic005G011300 Sobic005G011300 Sobic004G301000--Sobic005G011300 Sobic005G099000 Sobic005G099000 Sobic004G301000--Sobic005G099000 Sobic004G301000--Sobic002G251000 Sobic007G184600 Sobic007G184600 Sobic002G200600--Sobic007G184600 Sobic002G200600--Sobic001G402050 Sobic006G067800 Sobic006G067800 Sobic002G200600--Sobic006G067800 Sobic006G116700 Sobic006G116700 Sobic002G200600--Sobic006G116700 Sobic002G081600 Sobic002G081600 Sobic002G200600--Sobic002G081600 Sobic002G200600--Sobic007G197800 Sobic002G200600--Sobic001G374700 Sobic001G018900 Sobic001G018900 Sobic002G200600--Sobic001G018900 Sobic001G130301 Sobic001G130301 Sobic002G200600--Sobic001G130301 Sobic001G423800--Sobic004G243100 Sobic001G423800--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic001G423800--Sobic001G038900 Sobic001G423800--Sobic001G119400 Sobic001G423800--Sobic001G018300 Sobic007G155100 Sobic007G155100 Sobic001G423800--Sobic007G155100 Sobic008G136400 Sobic008G136400 Sobic001G423800--Sobic008G136400 Sobic001G423800--Sobic002G393000 Sobic001G423800--Sobic004G189400 Sobic001G011200 Sobic001G011200 Sobic010G150575--Sobic001G011200 Sobic003G321700 Sobic003G321700 Sobic010G150575--Sobic003G321700 Sobic001G016400 Sobic001G016400 Sobic010G150575--Sobic001G016400 Sobic010G150575--Sobic001G091801 Sobic004G198400 Sobic004G198400 Sobic010G150575--Sobic004G198400 Sobic002G374900 Sobic002G374900 Sobic010G150575--Sobic002G374900 Sobic009G166500 Sobic009G166500 Sobic010G150575--Sobic009G166500 Sobic001G018800 Sobic001G018800 Sobic010G150575--Sobic001G018800 Sobic004G145801 Sobic004G145801 Sobic010G150575--Sobic004G145801 Sobic009G050300 Sobic009G050300 Sobic003G322400--Sobic009G050300 Sobic003G322400--Sobic001G091801 Sobic007G212600 Sobic007G212600 Sobic003G322400--Sobic007G212600 Sobic003G322400--Sobic006G116700 Sobic001G054900 Sobic001G054900 Sobic003G322400--Sobic001G054900 Sobic003G408100 Sobic003G408100 Sobic003G322400--Sobic003G408100 Sobic003G322400--Sobic001G374700 Sobic003G322400--Sobic002G200600 Sobic003G322400--Sobic007G184600
Octagon: transcription factors


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