Gene annotation
Transcriptome id Sobic.003G249200.1
Synonym Sb03g030550
Functional annotation alpha/beta-Hydrolases superfamily protein (PubMedID : 26465154)
lipase class 3 family protein, putative, expressed
UniProt C5XFZ5
Pfam -
Panther DB PTHR31479 PTHR31479:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50890 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g47610.1 : lipase class 3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a038748
Brachypodium KQK09082 , KQK09083
Barley HORVU3Hr1G060640.13 , HORVU3Hr1G060640.15 , HORVU3Hr1G060640.14 , HORVU3Hr1G060640.1 , HORVU3Hr1G060640.3 , HORVU3Hr1G060640.2
Wheat TraesCS3B02G271100 , TraesCS3B02G271100 , TraesCS3A02G243000 , TraesCS3D02G242900 , TraesCS3A02G242900 , TraesCS3D02G243000 , TraesCS3B02G271000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G078800 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
2 Sobic.002G277700 expressed protein -
3 Sobic.002G417600 ATOFP17/OFP17, putative, expressed -
4 Sobic.004G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane attack complex component/perforin/complement C9, putative, expressed -
5 Sobic.002G325500 ankyrin repeat family protein, putative, expressed -
6 Sobic.001G189500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
7 Sobic.001G035300 ZOS3-20 - C2H2 zinc finger protein, expressed -
8 Sobic.001G373500 BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
9 Sobic.002G032900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
10 Sobic.009G174300 "Capable of trans-activating SbMATE promoter alleles harboring one, four, and five copies of the MITE repeats "(PubMedID : 30545913)@WRKY84, expressed -
11 Sobic.002G381200 expressed protein -
12 Sobic.002G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
13 Sobic.001G228900 exostosin family domain containing protein, expressed -
14 Sobic.004G187600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
15 Sobic.003G315166 - K13024: PPIP5K, inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase
16 Sobic.008G019900 - -
17 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
18 Sobic.005G053100 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
19 Sobic.007G061600 expressed protein -
20 Sobic.007G005100 L-asparaginase precursor protein, putative, expressed K13051: ASRGL1, L-asparaginase / beta-aspartyl-peptidase


Gene co-expression network
sample Sobic003G249200 Sobic003G249200 Sobic008G078800 Sobic008G078800 Sobic003G249200--Sobic008G078800 Sobic002G277700 Sobic002G277700 Sobic003G249200--Sobic002G277700 Sobic002G417600 Sobic002G417600 Sobic003G249200--Sobic002G417600 Sobic004G246300 Sobic004G246300 Sobic003G249200--Sobic004G246300 Sobic002G325500 Sobic002G325500 Sobic003G249200--Sobic002G325500 Sobic001G189500 Sobic001G189500 Sobic003G249200--Sobic001G189500 Sobic001G035300 Sobic001G035300 Sobic003G249200--Sobic001G035300 Sobic001G373500 Sobic001G373500 Sobic003G249200--Sobic001G373500 Sobic002G032900 Sobic002G032900 Sobic003G249200--Sobic002G032900 Sobic002G381200 Sobic002G381200 Sobic008G078800--Sobic002G381200 Sobic004G187600 Sobic004G187600 Sobic008G078800--Sobic004G187600 Sobic010G032500 Sobic010G032500 Sobic008G078800--Sobic010G032500 Sobic007G148100 Sobic007G148100 Sobic008G078800--Sobic007G148100 Sobic008G078800--Sobic002G417600 Sobic007G005100 Sobic007G005100 Sobic008G078800--Sobic007G005100 Sobic009G136800 Sobic009G136800 Sobic008G078800--Sobic009G136800 Sobic004G106500 Sobic004G106500 Sobic008G078800--Sobic004G106500 Sobic009G174300 Sobic009G174300 Sobic008G078800--Sobic009G174300 Sobic002G277700--Sobic001G189500 Sobic009G204800 Sobic009G204800 Sobic002G277700--Sobic009G204800 Sobic002G277700--Sobic001G373500 Sobic002G277700--Sobic004G246300 Sobic001G005000 Sobic001G005000 Sobic002G277700--Sobic001G005000 Sobic005G035000 Sobic005G035000 Sobic002G277700--Sobic005G035000 Sobic004G153700 Sobic004G153700 Sobic002G277700--Sobic004G153700 Sobic010G194500 Sobic010G194500 Sobic002G277700--Sobic010G194500 Sobic003G226100 Sobic003G226100 Sobic002G277700--Sobic003G226100 Sobic002G417600--Sobic008G078800 Sobic002G417600--Sobic002G381200 Sobic001G300700 Sobic001G300700 Sobic002G417600--Sobic001G300700 Sobic001G228900 Sobic001G228900 Sobic002G417600--Sobic001G228900 Sobic002G417600--Sobic001G035300 Sobic002G417600--Sobic004G106500 Sobic002G417600--Sobic002G325500 Sobic002G417600--Sobic003G249200 Sobic002G417600--Sobic004G187600 Sobic002G379700 Sobic002G379700 Sobic004G246300--Sobic002G379700 Sobic004G246300--Sobic002G277700 Sobic004G246300--Sobic009G204800 Sobic007G133600 Sobic007G133600 Sobic004G246300--Sobic007G133600 Sobic004G246300--Sobic010G194500 Sobic004G246300--Sobic001G005000 Sobic007G015400 Sobic007G015400 Sobic004G246300--Sobic007G015400 Sobic004G246300--Sobic002G032900 Sobic001G239400 Sobic001G239400 Sobic004G246300--Sobic001G239400 Sobic002G325500--Sobic001G035300 Sobic002G424500 Sobic002G424500 Sobic002G325500--Sobic002G424500 Sobic002G325500--Sobic007G005100 Sobic002G325500--Sobic004G106500 Sobic002G325500--Sobic001G228900 Sobic007G061600 Sobic007G061600 Sobic002G325500--Sobic007G061600 Sobic002G325500--Sobic008G078800 Sobic008G019900 Sobic008G019900 Sobic002G325500--Sobic008G019900 SobicK010100 SobicK010100 Sobic002G325500--SobicK010100 Sobic001G189500--Sobic001G373500 Sobic001G189500--Sobic002G277700 Sobic001G189500--Sobic005G035000 Sobic001G302300 Sobic001G302300 Sobic001G189500--Sobic001G302300 Sobic001G189500--Sobic003G226100 Sobic001G189500--Sobic004G153700 Sobic001G189500--Sobic009G204800 Sobic003G443200 Sobic003G443200 Sobic001G189500--Sobic003G443200 Sobic001G189500--Sobic010G194500 Sobic007G022300 Sobic007G022300 Sobic001G035300--Sobic007G022300 Sobic001G035300--Sobic001G228900 Sobic001G035300--Sobic002G325500 Sobic001G035300--Sobic004G106500 Sobic002G165020 Sobic002G165020 Sobic001G035300--Sobic002G165020 Sobic001G035300--Sobic002G417600 Sobic001G035300--Sobic008G019900 Sobic001G035300--SobicK010100 Sobic010G127500 Sobic010G127500 Sobic001G035300--Sobic010G127500 Sobic001G373500--Sobic005G035000 Sobic006G230100 Sobic006G230100 Sobic001G373500--Sobic006G230100 Sobic007G015000 Sobic007G015000 Sobic001G373500--Sobic007G015000 Sobic001G415100 Sobic001G415100 Sobic001G373500--Sobic001G415100 Sobic006G171100 Sobic006G171100 Sobic001G373500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic001G373500--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic001G373500--Sobic002G289500 Sobic004G299500 Sobic004G299500 Sobic001G373500--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic001G373500--Sobic001G293100 Sobic009G008300 Sobic009G008300 Sobic002G032900--Sobic009G008300 Sobic004G121200 Sobic004G121200 Sobic002G032900--Sobic004G121200 Sobic004G249700 Sobic004G249700 Sobic002G032900--Sobic004G249700 Sobic002G032900--Sobic007G133600 Sobic002G032900--Sobic002G379700 Sobic003G057600 Sobic003G057600 Sobic002G032900--Sobic003G057600 Sobic001G144300 Sobic001G144300 Sobic002G032900--Sobic001G144300 Sobic002G032900--Sobic002G277700 Sobic002G032900--Sobic004G246300
Octagon: transcription factors


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