Gene annotation
Transcriptome id Sobic.003G265600.1
Synonym EFR
Functional annotation receptor kinase, putative, expressed
UniProt A0A1B6Q5H7
Pfam PF08263 PF13855
Panther DB PTHR27000 PTHR27000:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G20480 : EF-TU receptor
RAP-DB (Rice) LOC_Os11g47290.1 : receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a038879
Brachypodium -
Barley HORVU2Hr1G120640.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
2 Sobic.007G117700 - -
3 Sobic.009G212800 WRKY7, expressed -
4 Sobic.003G376200 expressed protein -
5 Sobic.002G137800 gibberellin 20 oxidase 2, putative, expressed -
6 Sobic.001G030600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
7 Sobic.009G068900 WRKY67, expressed -
8 Sobic.003G409300 NB-ARC domain containing protein, expressed -
9 Sobic.004G092000 expressed protein -
10 Sobic.003G037400 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY10, expressed -
11 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
12 Sobic.001G118900 DUF292 domain containing protein, expressed -
13 Sobic.010G273700 no apical meristem protein, putative, expressed -
14 Sobic.001G318900 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.001G095750 - -
16 Sobic.001G351100 LOL3, putative, expressed -
17 Sobic.002G216400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.003G422700 amino acid permease family protein, putative, expressed -
19 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.009G028500 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic003G265600 Sobic003G265600 Sobic006G114200 Sobic006G114200 Sobic003G265600--Sobic006G114200 Sobic007G117700 Sobic007G117700 Sobic003G265600--Sobic007G117700 Sobic009G212800 Sobic009G212800 Sobic003G265600--Sobic009G212800 Sobic003G376200 Sobic003G376200 Sobic003G265600--Sobic003G376200 Sobic002G137800 Sobic002G137800 Sobic003G265600--Sobic002G137800 Sobic001G030600 Sobic001G030600 Sobic003G265600--Sobic001G030600 Sobic009G068900 Sobic009G068900 Sobic003G265600--Sobic009G068900 Sobic003G409300 Sobic003G409300 Sobic003G265600--Sobic003G409300 Sobic004G092000 Sobic004G092000 Sobic003G265600--Sobic004G092000 Sobic001G314300 Sobic001G314300 Sobic006G114200--Sobic001G314300 Sobic001G095750 Sobic001G095750 Sobic006G114200--Sobic001G095750 Sobic004G006500 Sobic004G006500 Sobic006G114200--Sobic004G006500 Sobic002G185200 Sobic002G185200 Sobic006G114200--Sobic002G185200 Sobic001G314700 Sobic001G314700 Sobic006G114200--Sobic001G314700 Sobic001G118900 Sobic001G118900 Sobic006G114200--Sobic001G118900 Sobic002G195800 Sobic002G195800 Sobic006G114200--Sobic002G195800 Sobic006G114200--Sobic001G030600 Sobic006G113800 Sobic006G113800 Sobic006G114200--Sobic006G113800 Sobic007G117700--Sobic003G265600 Sobic010G097900 Sobic010G097900 Sobic007G117700--Sobic010G097900 Sobic009G028500 Sobic009G028500 Sobic007G117700--Sobic009G028500 Sobic007G117700--Sobic001G030600 Sobic007G117700--Sobic009G212800 Sobic007G117700--Sobic002G137800 Sobic006G053651 Sobic006G053651 Sobic007G117700--Sobic006G053651 Sobic003G037400 Sobic003G037400 Sobic007G117700--Sobic003G037400 Sobic010G089700 Sobic010G089700 Sobic007G117700--Sobic010G089700 Sobic009G212800--Sobic009G068900 Sobic004G176900 Sobic004G176900 Sobic009G212800--Sobic004G176900 Sobic002G367900 Sobic002G367900 Sobic009G212800--Sobic002G367900 Sobic003G146000 Sobic003G146000 Sobic009G212800--Sobic003G146000 Sobic003G291600 Sobic003G291600 Sobic009G212800--Sobic003G291600 Sobic004G244100 Sobic004G244100 Sobic009G212800--Sobic004G244100 Sobic006G203000 Sobic006G203000 Sobic009G212800--Sobic006G203000 Sobic009G064400 Sobic009G064400 Sobic009G212800--Sobic009G064400 Sobic003G268900 Sobic003G268900 Sobic009G212800--Sobic003G268900 Sobic004G220600 Sobic004G220600 Sobic003G376200--Sobic004G220600 Sobic002G216500 Sobic002G216500 Sobic003G376200--Sobic002G216500 Sobic003G376200--Sobic004G092000 Sobic003G291700 Sobic003G291700 Sobic003G376200--Sobic003G291700 Sobic005G218500 Sobic005G218500 Sobic003G376200--Sobic005G218500 Sobic002G209100 Sobic002G209100 Sobic003G376200--Sobic002G209100 Sobic010G273700 Sobic010G273700 Sobic003G376200--Sobic010G273700 Sobic008G060300 Sobic008G060300 Sobic003G376200--Sobic008G060300 Sobic003G376200--Sobic002G195800 Sobic002G137800--Sobic001G095750 Sobic002G137800--Sobic001G118900 Sobic004G340800 Sobic004G340800 Sobic002G137800--Sobic004G340800 Sobic001G351100 Sobic001G351100 Sobic002G137800--Sobic001G351100 Sobic006G205200 Sobic006G205200 Sobic002G137800--Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic002G137800--Sobic001G161200 Sobic003G109832 Sobic003G109832 Sobic002G137800--Sobic003G109832 Sobic003G138400 Sobic003G138400 Sobic002G137800--Sobic003G138400 Sobic002G137800--Sobic009G028500 Sobic001G030600--Sobic001G095750 Sobic001G030600--Sobic004G006500 Sobic001G030600--Sobic006G114200 Sobic001G030600--Sobic001G118900 Sobic002G418900 Sobic002G418900 Sobic001G030600--Sobic002G418900 Sobic007G196400 Sobic007G196400 Sobic001G030600--Sobic007G196400 Sobic004G169900 Sobic004G169900 Sobic001G030600--Sobic004G169900 Sobic001G030600--Sobic010G273700 Sobic007G139900 Sobic007G139900 Sobic001G030600--Sobic007G139900 Sobic009G068900--Sobic009G212800 Sobic009G068900--Sobic004G176900 Sobic007G073750 Sobic007G073750 Sobic009G068900--Sobic007G073750 Sobic009G076700 Sobic009G076700 Sobic009G068900--Sobic009G076700 Sobic010G253500 Sobic010G253500 Sobic009G068900--Sobic010G253500 Sobic003G397400 Sobic003G397400 Sobic009G068900--Sobic003G397400 Sobic005G016900 Sobic005G016900 Sobic009G068900--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic009G068900--Sobic007G143100 Sobic007G143200 Sobic007G143200 Sobic009G068900--Sobic007G143200 Sobic003G409300--Sobic009G212800 Sobic003G409300--Sobic004G176900 Sobic008G185600 Sobic008G185600 Sobic003G409300--Sobic008G185600 Sobic004G337500 Sobic004G337500 Sobic003G409300--Sobic004G337500 Sobic003G409300--Sobic009G068900 Sobic003G409300--Sobic003G265600 Sobic003G409300--Sobic009G028500 Sobic010G054500 Sobic010G054500 Sobic003G409300--Sobic010G054500 Sobic003G409300--Sobic006G114200 Sobic004G092000--Sobic003G376200 Sobic003G339900 Sobic003G339900 Sobic004G092000--Sobic003G339900 Sobic001G339600 Sobic001G339600 Sobic004G092000--Sobic001G339600 Sobic004G092000--Sobic001G314300 Sobic002G073900 Sobic002G073900 Sobic004G092000--Sobic002G073900 Sobic004G092000--Sobic003G138400 Sobic009G227800 Sobic009G227800 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic004G092000--Sobic010G089700
Octagon: transcription factors


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