Gene annotation
Transcriptome id Sobic.003G409300.1
Synonym Sb03g044400
Functional annotation NB-ARC domain containing protein, expressed
UniProt C5XGX8
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF582
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46530 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os01g70080.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039260
Brachypodium KQK11296
Barley HORVU3Hr1G095710.2 , HORVU3Hr1G095710.6 , HORVU3Hr1G095710.5 , HORVU3Hr1G095710.3 , HORVU3Hr1G095710.1 , HORVU3Hr1G095710.7 , HORVU3Hr1G095710.4
Wheat TraesCS3A02G437800 , TraesCS3D02G430100 , TraesCS3D02G430100 , TraesCS3B02G471800
Populus -


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cDNA sequences
Sobic.003G409300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G212800 WRKY7, expressed -
2 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
3 Sobic.008G185600 expressed protein -
4 Sobic.004G337500 GATA zinc finger domain containing protein, expressed -
5 Sobic.009G068900 WRKY67, expressed -
6 Sobic.003G265600 receptor kinase, putative, expressed -
7 Sobic.009G028500 zinc finger family protein, putative, expressed -
8 Sobic.010G054500 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
9 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
10 Sobic.001G095700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.008G052500 receptor-like kinase, putative, expressed -
12 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
13 Sobic.008G166700 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
14 Sobic.004G076800 expressed protein -
15 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
16 Sobic.001G109100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAS family transcription factor domain containing protein, expressed -
17 Sobic.001G118900 DUF292 domain containing protein, expressed -
18 Sobic.001G342600 PDI, putative, expressed K17609: nucleoredoxin
19 Sobic.001G370600 expressed protein -
20 Sobic.008G065800 - -


Gene co-expression network
sample Sobic003G409300 Sobic003G409300 Sobic009G212800 Sobic009G212800 Sobic003G409300--Sobic009G212800 Sobic004G176900 Sobic004G176900 Sobic003G409300--Sobic004G176900 Sobic008G185600 Sobic008G185600 Sobic003G409300--Sobic008G185600 Sobic004G337500 Sobic004G337500 Sobic003G409300--Sobic004G337500 Sobic009G068900 Sobic009G068900 Sobic003G409300--Sobic009G068900 Sobic003G265600 Sobic003G265600 Sobic003G409300--Sobic003G265600 Sobic009G028500 Sobic009G028500 Sobic003G409300--Sobic009G028500 Sobic010G054500 Sobic010G054500 Sobic003G409300--Sobic010G054500 Sobic006G114200 Sobic006G114200 Sobic003G409300--Sobic006G114200 Sobic009G212800--Sobic009G068900 Sobic009G212800--Sobic004G176900 Sobic002G367900 Sobic002G367900 Sobic009G212800--Sobic002G367900 Sobic003G146000 Sobic003G146000 Sobic009G212800--Sobic003G146000 Sobic003G291600 Sobic003G291600 Sobic009G212800--Sobic003G291600 Sobic004G244100 Sobic004G244100 Sobic009G212800--Sobic004G244100 Sobic006G203000 Sobic006G203000 Sobic009G212800--Sobic006G203000 Sobic009G064400 Sobic009G064400 Sobic009G212800--Sobic009G064400 Sobic003G268900 Sobic003G268900 Sobic009G212800--Sobic003G268900 Sobic004G176900--Sobic009G068900 Sobic004G176900--Sobic004G244100 Sobic002G197600 Sobic002G197600 Sobic004G176900--Sobic002G197600 Sobic009G167000 Sobic009G167000 Sobic004G176900--Sobic009G167000 Sobic004G176900--Sobic009G212800 Sobic004G176900--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic004G176900--Sobic002G037400 Sobic008G058900 Sobic008G058900 Sobic004G176900--Sobic008G058900 Sobic004G176900--Sobic002G367900 Sobic004G319300 Sobic004G319300 Sobic008G185600--Sobic004G319300 Sobic003G272400 Sobic003G272400 Sobic008G185600--Sobic003G272400 Sobic003G407200 Sobic003G407200 Sobic008G185600--Sobic003G407200 Sobic008G185600--Sobic009G212800 Sobic008G185600--Sobic004G176900 Sobic008G185600--Sobic002G197600 Sobic009G138200 Sobic009G138200 Sobic008G185600--Sobic009G138200 Sobic008G185600--Sobic003G409300 Sobic008G185600--Sobic002G367900 Sobic003G423300 Sobic003G423300 Sobic004G337500--Sobic003G423300 Sobic001G109100 Sobic001G109100 Sobic004G337500--Sobic001G109100 Sobic001G095750 Sobic001G095750 Sobic004G337500--Sobic001G095750 Sobic004G281300 Sobic004G281300 Sobic004G337500--Sobic004G281300 Sobic001G430700 Sobic001G430700 Sobic004G337500--Sobic001G430700 Sobic001G450800 Sobic001G450800 Sobic004G337500--Sobic001G450800 Sobic002G009900 Sobic002G009900 Sobic004G337500--Sobic002G009900 Sobic001G145100 Sobic001G145100 Sobic004G337500--Sobic001G145100 Sobic003G361300 Sobic003G361300 Sobic004G337500--Sobic003G361300 Sobic009G068900--Sobic009G212800 Sobic009G068900--Sobic004G176900 Sobic007G073750 Sobic007G073750 Sobic009G068900--Sobic007G073750 Sobic009G076700 Sobic009G076700 Sobic009G068900--Sobic009G076700 Sobic010G253500 Sobic010G253500 Sobic009G068900--Sobic010G253500 Sobic003G397400 Sobic003G397400 Sobic009G068900--Sobic003G397400 Sobic005G016900 Sobic005G016900 Sobic009G068900--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic009G068900--Sobic007G143100 Sobic007G143200 Sobic007G143200 Sobic009G068900--Sobic007G143200 Sobic003G265600--Sobic006G114200 Sobic007G117700 Sobic007G117700 Sobic003G265600--Sobic007G117700 Sobic003G265600--Sobic009G212800 Sobic003G376200 Sobic003G376200 Sobic003G265600--Sobic003G376200 Sobic002G137800 Sobic002G137800 Sobic003G265600--Sobic002G137800 Sobic001G030600 Sobic001G030600 Sobic003G265600--Sobic001G030600 Sobic003G265600--Sobic009G068900 Sobic003G265600--Sobic003G409300 Sobic004G092000 Sobic004G092000 Sobic003G265600--Sobic004G092000 Sobic004G065900 Sobic004G065900 Sobic009G028500--Sobic004G065900 Sobic004G006500 Sobic004G006500 Sobic009G028500--Sobic004G006500 Sobic010G089700 Sobic010G089700 Sobic009G028500--Sobic010G089700 Sobic002G418900 Sobic002G418900 Sobic009G028500--Sobic002G418900 Sobic002G207300 Sobic002G207300 Sobic009G028500--Sobic002G207300 Sobic009G028500--Sobic002G367900 Sobic001G118900 Sobic001G118900 Sobic009G028500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic009G028500--Sobic009G010400 Sobic002G185200 Sobic002G185200 Sobic009G028500--Sobic002G185200 Sobic008G052500 Sobic008G052500 Sobic010G054500--Sobic008G052500 Sobic001G140200 Sobic001G140200 Sobic010G054500--Sobic001G140200 Sobic010G054500--Sobic005G016900 Sobic010G054500--Sobic007G143100 Sobic010G054500--Sobic007G073750 Sobic010G054500--Sobic007G143200 Sobic010G054500--Sobic009G076700 Sobic007G169600 Sobic007G169600 Sobic010G054500--Sobic007G169600 Sobic002G325600 Sobic002G325600 Sobic010G054500--Sobic002G325600 Sobic001G314300 Sobic001G314300 Sobic006G114200--Sobic001G314300 Sobic006G114200--Sobic001G095750 Sobic006G114200--Sobic004G006500 Sobic006G114200--Sobic002G185200 Sobic001G314700 Sobic001G314700 Sobic006G114200--Sobic001G314700 Sobic006G114200--Sobic001G118900 Sobic002G195800 Sobic002G195800 Sobic006G114200--Sobic002G195800 Sobic006G114200--Sobic001G030600 Sobic006G113800 Sobic006G113800 Sobic006G114200--Sobic006G113800
Octagon: transcription factors


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