Gene annotation
Transcriptome id Sobic.001G109100.1
Synonym Sb01g009740
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
GRAS family transcription factor domain containing protein, expressed
UniProt A0A1B6QID4
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF65
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66770 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os03g51330.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016916 , Zm00025a007947
Brachypodium KQK13466
Barley HORVU4Hr1G008980.4 , HORVU4Hr1G008980.3 , HORVU4Hr1G008980.2 , HORVU4Hr1G008980.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G109100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G337500 GATA zinc finger domain containing protein, expressed -
2 Sobic.002G192101 - -
3 Sobic.004G283400 RING-H2 finger protein, putative, expressed -
4 Sobic.008G166700 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
5 Sobic.005G090600 peptide transporter PTR2, putative, expressed -
6 Sobic.007G136700 YGL010w, putative, expressed -
7 Sobic.001G044800 uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
8 Sobic.004G281300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
9 Sobic.008G059400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
10 Sobic.004G275100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.001G095750 - -
12 Sobic.001G344000 DUF581 domain containing protein, expressed -
13 Sobic.010G268200 zinc finger, C3HC4 type, domain containing protein, expressed -
14 Sobic.007G139900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G018400 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
16 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
17 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.003G409300 NB-ARC domain containing protein, expressed -
19 Sobic.010G118100 protein kinase, putative, expressed -
20 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase


Gene co-expression network
sample Sobic001G109100 Sobic001G109100 Sobic004G337500 Sobic004G337500 Sobic001G109100--Sobic004G337500 Sobic002G192101 Sobic002G192101 Sobic001G109100--Sobic002G192101 Sobic004G283400 Sobic004G283400 Sobic001G109100--Sobic004G283400 Sobic008G166700 Sobic008G166700 Sobic001G109100--Sobic008G166700 Sobic005G090600 Sobic005G090600 Sobic001G109100--Sobic005G090600 Sobic007G136700 Sobic007G136700 Sobic001G109100--Sobic007G136700 Sobic001G044800 Sobic001G044800 Sobic001G109100--Sobic001G044800 Sobic004G281300 Sobic004G281300 Sobic001G109100--Sobic004G281300 Sobic008G059400 Sobic008G059400 Sobic001G109100--Sobic008G059400 Sobic003G423300 Sobic003G423300 Sobic004G337500--Sobic003G423300 Sobic004G337500--Sobic001G109100 Sobic001G095750 Sobic001G095750 Sobic004G337500--Sobic001G095750 Sobic004G337500--Sobic004G281300 Sobic001G430700 Sobic001G430700 Sobic004G337500--Sobic001G430700 Sobic001G450800 Sobic001G450800 Sobic004G337500--Sobic001G450800 Sobic002G009900 Sobic002G009900 Sobic004G337500--Sobic002G009900 Sobic001G145100 Sobic001G145100 Sobic004G337500--Sobic001G145100 Sobic003G361300 Sobic003G361300 Sobic004G337500--Sobic003G361300 Sobic002G192101--Sobic001G109100 Sobic002G192101--Sobic004G337500 Sobic002G192101--Sobic001G145100 Sobic009G188800 Sobic009G188800 Sobic002G192101--Sobic009G188800 Sobic010G076500 Sobic010G076500 Sobic002G192101--Sobic010G076500 Sobic002G192101--Sobic001G095750 Sobic004G275100 Sobic004G275100 Sobic002G192101--Sobic004G275100 Sobic002G192101--Sobic001G044800 Sobic002G192101--Sobic008G166700 Sobic004G283400--Sobic001G109100 Sobic010G118100 Sobic010G118100 Sobic004G283400--Sobic010G118100 Sobic003G219100 Sobic003G219100 Sobic004G283400--Sobic003G219100 Sobic004G253900 Sobic004G253900 Sobic004G283400--Sobic004G253900 Sobic007G196400 Sobic007G196400 Sobic004G283400--Sobic007G196400 Sobic001G363300 Sobic001G363300 Sobic004G283400--Sobic001G363300 Sobic001G161200 Sobic001G161200 Sobic004G283400--Sobic001G161200 Sobic004G283400--Sobic001G095750 Sobic001G045000 Sobic001G045000 Sobic004G283400--Sobic001G045000 Sobic008G166700--Sobic001G109100 Sobic008G166700--Sobic003G423300 Sobic006G114200 Sobic006G114200 Sobic008G166700--Sobic006G114200 Sobic003G409300 Sobic003G409300 Sobic008G166700--Sobic003G409300 Sobic001G140200 Sobic001G140200 Sobic008G166700--Sobic001G140200 Sobic008G065800 Sobic008G065800 Sobic008G166700--Sobic008G065800 Sobic002G216400 Sobic002G216400 Sobic008G166700--Sobic002G216400 Sobic008G109100 Sobic008G109100 Sobic008G166700--Sobic008G109100 Sobic008G166700--Sobic001G095750 Sobic007G054100 Sobic007G054100 Sobic005G090600--Sobic007G054100 Sobic002G216500 Sobic002G216500 Sobic005G090600--Sobic002G216500 Sobic003G376200 Sobic003G376200 Sobic005G090600--Sobic003G376200 Sobic004G092000 Sobic004G092000 Sobic005G090600--Sobic004G092000 Sobic002G073900 Sobic002G073900 Sobic005G090600--Sobic002G073900 Sobic003G153800 Sobic003G153800 Sobic005G090600--Sobic003G153800 Sobic010G214200 Sobic010G214200 Sobic005G090600--Sobic010G214200 Sobic005G218500 Sobic005G218500 Sobic005G090600--Sobic005G218500 Sobic007G014600 Sobic007G014600 Sobic005G090600--Sobic007G014600 Sobic001G420700 Sobic001G420700 Sobic007G136700--Sobic001G420700 Sobic010G066300 Sobic010G066300 Sobic007G136700--Sobic010G066300 Sobic002G427900 Sobic002G427900 Sobic007G136700--Sobic002G427900 Sobic010G045833 Sobic010G045833 Sobic007G136700--Sobic010G045833 Sobic003G424400 Sobic003G424400 Sobic007G136700--Sobic003G424400 Sobic004G332000 Sobic004G332000 Sobic007G136700--Sobic004G332000 Sobic004G352900 Sobic004G352900 Sobic007G136700--Sobic004G352900 Sobic007G136700--Sobic008G065800 Sobic005G046100 Sobic005G046100 Sobic007G136700--Sobic005G046100 Sobic007G183100 Sobic007G183100 Sobic001G044800--Sobic007G183100 Sobic003G184765 Sobic003G184765 Sobic001G044800--Sobic003G184765 Sobic001G044800--Sobic005G218500 Sobic002G160600 Sobic002G160600 Sobic001G044800--Sobic002G160600 Sobic003G423200 Sobic003G423200 Sobic001G044800--Sobic003G423200 Sobic003G109832 Sobic003G109832 Sobic001G044800--Sobic003G109832 Sobic001G314300 Sobic001G314300 Sobic001G044800--Sobic001G314300 Sobic003G248901 Sobic003G248901 Sobic001G044800--Sobic003G248901 Sobic001G044800--Sobic010G214200 Sobic010G089700 Sobic010G089700 Sobic004G281300--Sobic010G089700 Sobic006G042200 Sobic006G042200 Sobic004G281300--Sobic006G042200 Sobic009G028500 Sobic009G028500 Sobic004G281300--Sobic009G028500 Sobic002G301800 Sobic002G301800 Sobic004G281300--Sobic002G301800 Sobic003G403500 Sobic003G403500 Sobic004G281300--Sobic003G403500 Sobic003G422700 Sobic003G422700 Sobic004G281300--Sobic003G422700 Sobic001G034300 Sobic001G034300 Sobic004G281300--Sobic001G034300 Sobic004G281300--Sobic004G337500 Sobic001G351100 Sobic001G351100 Sobic004G281300--Sobic001G351100 Sobic007G064800 Sobic007G064800 Sobic008G059400--Sobic007G064800 Sobic007G124100 Sobic007G124100 Sobic008G059400--Sobic007G124100 Sobic008G059400--Sobic002G160600 Sobic010G197700 Sobic010G197700 Sobic008G059400--Sobic010G197700 Sobic008G059400--Sobic001G161200 Sobic010G268200 Sobic010G268200 Sobic008G059400--Sobic010G268200 Sobic008G059400--Sobic001G109100 Sobic004G176900 Sobic004G176900 Sobic008G059400--Sobic004G176900 Sobic002G207300 Sobic002G207300 Sobic008G059400--Sobic002G207300
Octagon: transcription factors


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