Gene annotation
Transcriptome id Sobic.007G117700.2,Sobic.007G117700.4,Sobic.007G117700.3
Synonym
Functional annotation -
UniProt A0A194YP80
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G265600 receptor kinase, putative, expressed -
2 Sobic.010G097900 expressed protein -
3 Sobic.009G028500 zinc finger family protein, putative, expressed -
4 Sobic.001G030600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
5 Sobic.009G212800 WRKY7, expressed -
6 Sobic.002G137800 gibberellin 20 oxidase 2, putative, expressed -
7 Sobic.006G053651 - -
8 Sobic.003G037400 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY10, expressed -
9 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
10 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
11 Sobic.004G092000 expressed protein -
12 Sobic.004G006500 expressed protein -
13 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
14 Sobic.005G049475 - -
15 Sobic.008G049250 - -
16 Sobic.004G220600 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
17 Sobic.003G409300 NB-ARC domain containing protein, expressed -
18 Sobic.001G095750 - -
19 Sobic.001G118900 DUF292 domain containing protein, expressed -
20 Sobic.004G169900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@U-box domain containing protein, expressed -


Gene co-expression network
sample Sobic007G117700 Sobic007G117700 Sobic003G265600 Sobic003G265600 Sobic007G117700--Sobic003G265600 Sobic010G097900 Sobic010G097900 Sobic007G117700--Sobic010G097900 Sobic009G028500 Sobic009G028500 Sobic007G117700--Sobic009G028500 Sobic001G030600 Sobic001G030600 Sobic007G117700--Sobic001G030600 Sobic009G212800 Sobic009G212800 Sobic007G117700--Sobic009G212800 Sobic002G137800 Sobic002G137800 Sobic007G117700--Sobic002G137800 Sobic006G053651 Sobic006G053651 Sobic007G117700--Sobic006G053651 Sobic003G037400 Sobic003G037400 Sobic007G117700--Sobic003G037400 Sobic010G089700 Sobic010G089700 Sobic007G117700--Sobic010G089700 Sobic006G114200 Sobic006G114200 Sobic003G265600--Sobic006G114200 Sobic003G265600--Sobic007G117700 Sobic003G265600--Sobic009G212800 Sobic003G376200 Sobic003G376200 Sobic003G265600--Sobic003G376200 Sobic003G265600--Sobic002G137800 Sobic003G265600--Sobic001G030600 Sobic009G068900 Sobic009G068900 Sobic003G265600--Sobic009G068900 Sobic003G409300 Sobic003G409300 Sobic003G265600--Sobic003G409300 Sobic004G092000 Sobic004G092000 Sobic003G265600--Sobic004G092000 Sobic001G146400 Sobic001G146400 Sobic010G097900--Sobic001G146400 Sobic004G169900 Sobic004G169900 Sobic010G097900--Sobic004G169900 Sobic010G018300 Sobic010G018300 Sobic010G097900--Sobic010G018300 Sobic002G386200 Sobic002G386200 Sobic010G097900--Sobic002G386200 Sobic001G146500 Sobic001G146500 Sobic010G097900--Sobic001G146500 Sobic004G052500 Sobic004G052500 Sobic010G097900--Sobic004G052500 Sobic003G138400 Sobic003G138400 Sobic010G097900--Sobic003G138400 Sobic010G273600 Sobic010G273600 Sobic010G097900--Sobic010G273600 Sobic006G168000 Sobic006G168000 Sobic010G097900--Sobic006G168000 Sobic004G065900 Sobic004G065900 Sobic009G028500--Sobic004G065900 Sobic004G006500 Sobic004G006500 Sobic009G028500--Sobic004G006500 Sobic009G028500--Sobic010G089700 Sobic002G418900 Sobic002G418900 Sobic009G028500--Sobic002G418900 Sobic002G207300 Sobic002G207300 Sobic009G028500--Sobic002G207300 Sobic002G367900 Sobic002G367900 Sobic009G028500--Sobic002G367900 Sobic001G118900 Sobic001G118900 Sobic009G028500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic009G028500--Sobic009G010400 Sobic002G185200 Sobic002G185200 Sobic009G028500--Sobic002G185200 Sobic001G095750 Sobic001G095750 Sobic001G030600--Sobic001G095750 Sobic001G030600--Sobic004G006500 Sobic001G030600--Sobic006G114200 Sobic001G030600--Sobic001G118900 Sobic001G030600--Sobic002G418900 Sobic007G196400 Sobic007G196400 Sobic001G030600--Sobic007G196400 Sobic001G030600--Sobic004G169900 Sobic010G273700 Sobic010G273700 Sobic001G030600--Sobic010G273700 Sobic007G139900 Sobic007G139900 Sobic001G030600--Sobic007G139900 Sobic009G212800--Sobic009G068900 Sobic004G176900 Sobic004G176900 Sobic009G212800--Sobic004G176900 Sobic009G212800--Sobic002G367900 Sobic003G146000 Sobic003G146000 Sobic009G212800--Sobic003G146000 Sobic003G291600 Sobic003G291600 Sobic009G212800--Sobic003G291600 Sobic004G244100 Sobic004G244100 Sobic009G212800--Sobic004G244100 Sobic006G203000 Sobic006G203000 Sobic009G212800--Sobic006G203000 Sobic009G064400 Sobic009G064400 Sobic009G212800--Sobic009G064400 Sobic003G268900 Sobic003G268900 Sobic009G212800--Sobic003G268900 Sobic002G137800--Sobic001G095750 Sobic002G137800--Sobic001G118900 Sobic004G340800 Sobic004G340800 Sobic002G137800--Sobic004G340800 Sobic001G351100 Sobic001G351100 Sobic002G137800--Sobic001G351100 Sobic006G205200 Sobic006G205200 Sobic002G137800--Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic002G137800--Sobic001G161200 Sobic003G109832 Sobic003G109832 Sobic002G137800--Sobic003G109832 Sobic002G137800--Sobic003G138400 Sobic002G137800--Sobic009G028500 Sobic006G053651--Sobic010G273600 Sobic006G053651--Sobic010G097900 Sobic003G035332 Sobic003G035332 Sobic006G053651--Sobic003G035332 Sobic004G180800 Sobic004G180800 Sobic006G053651--Sobic004G180800 Sobic009G161350 Sobic009G161350 Sobic006G053651--Sobic009G161350 Sobic004G043400 Sobic004G043400 Sobic006G053651--Sobic004G043400 Sobic006G053651--Sobic007G117700 Sobic003G037400--Sobic001G118900 Sobic003G037400--Sobic004G065900 Sobic003G037400--Sobic009G028500 Sobic007G124100 Sobic007G124100 Sobic003G037400--Sobic007G124100 Sobic010G221032 Sobic010G221032 Sobic003G037400--Sobic010G221032 Sobic003G037400--Sobic010G089700 Sobic003G037400--Sobic002G207300 Sobic001G095700 Sobic001G095700 Sobic003G037400--Sobic001G095700 Sobic003G037400--Sobic003G138400 Sobic010G089700--Sobic009G028500 Sobic004G281300 Sobic004G281300 Sobic010G089700--Sobic004G281300 Sobic010G089700--Sobic004G006500 Sobic010G089700--Sobic004G092000 Sobic009G032400 Sobic009G032400 Sobic010G089700--Sobic009G032400 Sobic010G089700--Sobic002G137800 Sobic010G089700--Sobic002G418900 Sobic010G089700--Sobic001G095750 Sobic010G089700--Sobic007G124100
Octagon: transcription factors


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