Gene annotation
Transcriptome id Sobic.008G049250.1,Sobic.008G049250.2
Synonym -
Functional annotation -
UniProt A0A1Z5R4Z1 , A0A1Z5R5Z0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G370400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
2 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
3 Sobic.010G097900 expressed protein -
4 Sobic.003G294350 - -
5 Sobic.007G025800 amino acid transporter, putative, expressed -
6 Sobic.001G030600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
7 Sobic.004G006500 expressed protein -
8 Sobic.008G162201 - K04730: interleukin-1 receptor-associated kinase 1
9 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
11 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
12 Sobic.007G196400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
13 Sobic.003G175500 - -
14 Sobic.004G169900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@U-box domain containing protein, expressed -
15 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
16 Sobic.003G225900 expressed protein -
17 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
18 Sobic.009G028500 zinc finger family protein, putative, expressed -
19 Sobic.003G229000 cytochrome P450 72A1, putative, expressed -
20 Sobic.003G291600 receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic008G049250 Sobic008G049250 Sobic003G370400 Sobic003G370400 Sobic008G049250--Sobic003G370400 Sobic003G363100 Sobic003G363100 Sobic008G049250--Sobic003G363100 Sobic010G097900 Sobic010G097900 Sobic008G049250--Sobic010G097900 Sobic003G294350 Sobic003G294350 Sobic008G049250--Sobic003G294350 Sobic007G025800 Sobic007G025800 Sobic008G049250--Sobic007G025800 Sobic001G030600 Sobic001G030600 Sobic008G049250--Sobic001G030600 Sobic004G006500 Sobic004G006500 Sobic008G049250--Sobic004G006500 Sobic008G162201 Sobic008G162201 Sobic008G049250--Sobic008G162201 Sobic010G260300 Sobic010G260300 Sobic008G049250--Sobic010G260300 Sobic003G109832 Sobic003G109832 Sobic003G370400--Sobic003G109832 Sobic003G370400--Sobic010G260300 Sobic003G225900 Sobic003G225900 Sobic003G370400--Sobic003G225900 Sobic003G370400--Sobic008G049250 Sobic006G114200 Sobic006G114200 Sobic003G370400--Sobic006G114200 Sobic003G229000 Sobic003G229000 Sobic003G370400--Sobic003G229000 Sobic002G089700 Sobic002G089700 Sobic003G370400--Sobic002G089700 Sobic003G078501 Sobic003G078501 Sobic003G370400--Sobic003G078501 Sobic009G020950 Sobic009G020950 Sobic003G370400--Sobic009G020950 Sobic001G469500 Sobic001G469500 Sobic003G363100--Sobic001G469500 Sobic005G217200 Sobic005G217200 Sobic003G363100--Sobic005G217200 Sobic010G018100 Sobic010G018100 Sobic003G363100--Sobic010G018100 Sobic009G000200 Sobic009G000200 Sobic003G363100--Sobic009G000200 Sobic008G189200 Sobic008G189200 Sobic003G363100--Sobic008G189200 Sobic007G135000 Sobic007G135000 Sobic003G363100--Sobic007G135000 Sobic004G028600 Sobic004G028600 Sobic003G363100--Sobic004G028600 Sobic002G274800 Sobic002G274800 Sobic003G363100--Sobic002G274800 Sobic003G276000 Sobic003G276000 Sobic003G363100--Sobic003G276000 Sobic001G146400 Sobic001G146400 Sobic010G097900--Sobic001G146400 Sobic004G169900 Sobic004G169900 Sobic010G097900--Sobic004G169900 Sobic010G018300 Sobic010G018300 Sobic010G097900--Sobic010G018300 Sobic002G386200 Sobic002G386200 Sobic010G097900--Sobic002G386200 Sobic001G146500 Sobic001G146500 Sobic010G097900--Sobic001G146500 Sobic004G052500 Sobic004G052500 Sobic010G097900--Sobic004G052500 Sobic003G138400 Sobic003G138400 Sobic010G097900--Sobic003G138400 Sobic010G273600 Sobic010G273600 Sobic010G097900--Sobic010G273600 Sobic006G168000 Sobic006G168000 Sobic010G097900--Sobic006G168000 Sobic007G089101 Sobic007G089101 Sobic003G294350--Sobic007G089101 Sobic003G294350--Sobic008G049250 Sobic003G294350--Sobic001G146400 Sobic003G294350--Sobic004G169900 Sobic003G294350--Sobic010G097900 Sobic001G454200 Sobic001G454200 Sobic003G294350--Sobic001G454200 Sobic008G090800 Sobic008G090800 Sobic003G294350--Sobic008G090800 Sobic003G146100 Sobic003G146100 Sobic003G294350--Sobic003G146100 Sobic004G182300 Sobic004G182300 Sobic003G294350--Sobic004G182300 Sobic007G025800--Sobic010G260300 Sobic002G271100 Sobic002G271100 Sobic007G025800--Sobic002G271100 Sobic007G025800--Sobic003G225900 Sobic009G079300 Sobic009G079300 Sobic007G025800--Sobic009G079300 Sobic002G189000 Sobic002G189000 Sobic007G025800--Sobic002G189000 Sobic007G131700 Sobic007G131700 Sobic007G025800--Sobic007G131700 Sobic006G267900 Sobic006G267900 Sobic007G025800--Sobic006G267900 Sobic004G236550 Sobic004G236550 Sobic007G025800--Sobic004G236550 Sobic007G025800--Sobic003G229000 Sobic001G095750 Sobic001G095750 Sobic001G030600--Sobic001G095750 Sobic001G030600--Sobic004G006500 Sobic001G030600--Sobic006G114200 Sobic001G118900 Sobic001G118900 Sobic001G030600--Sobic001G118900 Sobic002G418900 Sobic002G418900 Sobic001G030600--Sobic002G418900 Sobic007G196400 Sobic007G196400 Sobic001G030600--Sobic007G196400 Sobic001G030600--Sobic004G169900 Sobic010G273700 Sobic010G273700 Sobic001G030600--Sobic010G273700 Sobic007G139900 Sobic007G139900 Sobic001G030600--Sobic007G139900 Sobic002G185200 Sobic002G185200 Sobic004G006500--Sobic002G185200 Sobic004G006500--Sobic002G418900 Sobic004G006500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic004G006500--Sobic009G010400 Sobic009G028500 Sobic009G028500 Sobic004G006500--Sobic009G028500 Sobic004G065900 Sobic004G065900 Sobic004G006500--Sobic004G065900 Sobic002G195800 Sobic002G195800 Sobic004G006500--Sobic002G195800 Sobic004G006500--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic004G006500--Sobic004G086800 Sobic001G136300 Sobic001G136300 Sobic008G162201--Sobic001G136300 Sobic006G246200 Sobic006G246200 Sobic008G162201--Sobic006G246200 Sobic007G157100 Sobic007G157100 Sobic008G162201--Sobic007G157100 Sobic009G241400 Sobic009G241400 Sobic008G162201--Sobic009G241400 Sobic008G162201--Sobic006G168000 Sobic009G241500 Sobic009G241500 Sobic008G162201--Sobic009G241500 Sobic005G082700 Sobic005G082700 Sobic008G162201--Sobic005G082700 Sobic005G133166 Sobic005G133166 Sobic008G162201--Sobic005G133166 Sobic005G085500 Sobic005G085500 Sobic008G162201--Sobic005G085500 Sobic010G260300--Sobic002G189000 Sobic010G260300--Sobic003G229000 Sobic009G183000 Sobic009G183000 Sobic010G260300--Sobic009G183000 Sobic010G260300--Sobic007G025800 Sobic010G260300--Sobic002G271100 Sobic010G260300--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic010G260300--Sobic004G155150 Sobic003G233900 Sobic003G233900 Sobic010G260300--Sobic003G233900 Sobic003G198150 Sobic003G198150 Sobic010G260300--Sobic003G198150
Octagon: transcription factors


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