Gene annotation
Transcriptome id Sobic.003G294350.1
Synonym -
Functional annotation -
UniProt A0A1W0VZJ4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) ChrUn.fgenesh.mRNA.22 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G089101 - -
2 Sobic.008G049250 - -
3 Sobic.001G146400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.004G169900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@U-box domain containing protein, expressed -
5 Sobic.010G097900 expressed protein -
6 Sobic.001G454200 - -
7 Sobic.008G090800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Protein copper ion binding protein (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
8 Sobic.003G146100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
9 Sobic.004G182300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MLO domain containing protein, putative, expressed K08472: mlo protein
10 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
11 Sobic.009G171600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY70, expressed -
12 Sobic.004G114500 DNA binding protein, putative, expressed -
13 Sobic.001G390700 VQ domain containing protein, putative, expressed -
14 Sobic.009G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
16 Sobic.004G236000 laccase precursor protein, putative, expressed K05909: laccase
17 Sobic.003G291600 receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
19 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
20 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor


Gene co-expression network
sample Sobic003G294350 Sobic003G294350 Sobic007G089101 Sobic007G089101 Sobic003G294350--Sobic007G089101 Sobic008G049250 Sobic008G049250 Sobic003G294350--Sobic008G049250 Sobic001G146400 Sobic001G146400 Sobic003G294350--Sobic001G146400 Sobic004G169900 Sobic004G169900 Sobic003G294350--Sobic004G169900 Sobic010G097900 Sobic010G097900 Sobic003G294350--Sobic010G097900 Sobic001G454200 Sobic001G454200 Sobic003G294350--Sobic001G454200 Sobic008G090800 Sobic008G090800 Sobic003G294350--Sobic008G090800 Sobic003G146100 Sobic003G146100 Sobic003G294350--Sobic003G146100 Sobic004G182300 Sobic004G182300 Sobic003G294350--Sobic004G182300 Sobic009G241400 Sobic009G241400 Sobic007G089101--Sobic009G241400 Sobic010G047800 Sobic010G047800 Sobic007G089101--Sobic010G047800 Sobic009G241300 Sobic009G241300 Sobic007G089101--Sobic009G241300 Sobic006G148500 Sobic006G148500 Sobic007G089101--Sobic006G148500 Sobic004G006966 Sobic004G006966 Sobic007G089101--Sobic004G006966 Sobic003G370400 Sobic003G370400 Sobic008G049250--Sobic003G370400 Sobic003G363100 Sobic003G363100 Sobic008G049250--Sobic003G363100 Sobic008G049250--Sobic010G097900 Sobic008G049250--Sobic003G294350 Sobic007G025800 Sobic007G025800 Sobic008G049250--Sobic007G025800 Sobic001G030600 Sobic001G030600 Sobic008G049250--Sobic001G030600 Sobic004G006500 Sobic004G006500 Sobic008G049250--Sobic004G006500 Sobic008G162201 Sobic008G162201 Sobic008G049250--Sobic008G162201 Sobic010G260300 Sobic010G260300 Sobic008G049250--Sobic010G260300 Sobic010G018300 Sobic010G018300 Sobic001G146400--Sobic010G018300 Sobic002G386200 Sobic002G386200 Sobic001G146400--Sobic002G386200 Sobic002G199500 Sobic002G199500 Sobic001G146400--Sobic002G199500 Sobic001G146400--Sobic004G169900 Sobic001G146500 Sobic001G146500 Sobic001G146400--Sobic001G146500 Sobic009G067400 Sobic009G067400 Sobic001G146400--Sobic009G067400 Sobic001G381300 Sobic001G381300 Sobic001G146400--Sobic001G381300 Sobic010G163150 Sobic010G163150 Sobic001G146400--Sobic010G163150 Sobic009G121600 Sobic009G121600 Sobic001G146400--Sobic009G121600 Sobic004G169900--Sobic001G146400 Sobic009G010400 Sobic009G010400 Sobic004G169900--Sobic009G010400 Sobic004G169900--Sobic010G018300 Sobic004G169900--Sobic002G386200 Sobic004G169900--Sobic004G006500 Sobic010G102000 Sobic010G102000 Sobic004G169900--Sobic010G102000 Sobic005G165900 Sobic005G165900 Sobic004G169900--Sobic005G165900 Sobic006G257700 Sobic006G257700 Sobic004G169900--Sobic006G257700 Sobic001G064900 Sobic001G064900 Sobic004G169900--Sobic001G064900 Sobic010G097900--Sobic001G146400 Sobic010G097900--Sobic004G169900 Sobic010G097900--Sobic010G018300 Sobic010G097900--Sobic002G386200 Sobic010G097900--Sobic001G146500 Sobic004G052500 Sobic004G052500 Sobic010G097900--Sobic004G052500 Sobic003G138400 Sobic003G138400 Sobic010G097900--Sobic003G138400 Sobic010G273600 Sobic010G273600 Sobic010G097900--Sobic010G273600 Sobic006G168000 Sobic006G168000 Sobic010G097900--Sobic006G168000 Sobic003G276000 Sobic003G276000 Sobic001G454200--Sobic003G276000 Sobic001G454200--Sobic008G090800 Sobic001G454200--Sobic003G363100 Sobic010G162900 Sobic010G162900 Sobic001G454200--Sobic010G162900 Sobic010G018100 Sobic010G018100 Sobic001G454200--Sobic010G018100 Sobic005G217200 Sobic005G217200 Sobic001G454200--Sobic005G217200 Sobic001G318900 Sobic001G318900 Sobic001G454200--Sobic001G318900 Sobic001G454200--Sobic004G182300 Sobic001G146200 Sobic001G146200 Sobic001G454200--Sobic001G146200 Sobic008G090800--Sobic003G276000 Sobic008G090800--Sobic001G454200 Sobic008G090800--Sobic010G162900 Sobic009G142200 Sobic009G142200 Sobic008G090800--Sobic009G142200 Sobic003G000600 Sobic003G000600 Sobic008G090800--Sobic003G000600 Sobic008G090800--Sobic001G146200 Sobic008G090800--Sobic003G294350 Sobic009G038501 Sobic009G038501 Sobic008G090800--Sobic009G038501 Sobic008G144500 Sobic008G144500 Sobic008G090800--Sobic008G144500 Sobic002G379866 Sobic002G379866 Sobic003G146100--Sobic002G379866 Sobic010G163000 Sobic010G163000 Sobic003G146100--Sobic010G163000 Sobic003G019200 Sobic003G019200 Sobic003G146100--Sobic003G019200 Sobic001G399100 Sobic001G399100 Sobic003G146100--Sobic001G399100 Sobic005G109000 Sobic005G109000 Sobic003G146100--Sobic005G109000 Sobic002G232800 Sobic002G232800 Sobic003G146100--Sobic002G232800 Sobic003G341100 Sobic003G341100 Sobic003G146100--Sobic003G341100 Sobic006G192500 Sobic006G192500 Sobic003G146100--Sobic006G192500 Sobic002G118600 Sobic002G118600 Sobic003G146100--Sobic002G118600 Sobic007G196600 Sobic007G196600 Sobic004G182300--Sobic007G196600 Sobic001G074200 Sobic001G074200 Sobic004G182300--Sobic001G074200 Sobic004G182300--Sobic003G146100 Sobic001G157200 Sobic001G157200 Sobic004G182300--Sobic001G157200 Sobic004G182300--Sobic002G379866 Sobic001G314700 Sobic001G314700 Sobic004G182300--Sobic001G314700 Sobic009G171600 Sobic009G171600 Sobic004G182300--Sobic009G171600 Sobic002G222800 Sobic002G222800 Sobic004G182300--Sobic002G222800 Sobic004G058000 Sobic004G058000 Sobic004G182300--Sobic004G058000
Octagon: transcription factors


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