Gene annotation
Transcriptome id Sobic.003G311400.1,Sobic.003G311400.2,Sobic.003G311400.3
Synonym
Functional annotation -
UniProt A0A1B6Q6C8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G204100 kelch repeat protein, putative, expressed -
2 Sobic.002G120200 pentatricopeptide, putative, expressed -
3 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
4 Sobic.004G259101 - -
5 Sobic.008G001300 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
6 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
7 Sobic.001G451200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
8 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
9 Sobic.006G181600 MYB family transcription factor, putative, expressed -
10 Sobic.007G142900 receptor-like kinase, putative, expressed -
11 Sobic.003G299700 TCP4(PubMedID : 24676859)@CIN-like (ClassII) Subclade 16 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@slTCP3, putative, expressed -
12 Sobic.009G260200 helix-loop-helix DNA-binding protein, putative, expressed -
13 Sobic.003G096300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
14 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
15 Sobic.007G189400 BEE 1, putative, expressed -
16 Sobic.006G185800 OsSub45 - Putative Subtilisin homologue, expressed -
17 Sobic.003G273300 single myb histone, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.003G048700 AGC_PVPK_like_kin82y.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
19 Sobic.002G162000 - -
20 Sobic.003G218700 LSD1 zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic003G311400 Sobic003G311400 Sobic005G204100 Sobic005G204100 Sobic003G311400--Sobic005G204100 Sobic002G120200 Sobic002G120200 Sobic003G311400--Sobic002G120200 Sobic001G258100 Sobic001G258100 Sobic003G311400--Sobic001G258100 Sobic004G259101 Sobic004G259101 Sobic003G311400--Sobic004G259101 Sobic008G001300 Sobic008G001300 Sobic003G311400--Sobic008G001300 Sobic003G420800 Sobic003G420800 Sobic003G311400--Sobic003G420800 Sobic001G451200 Sobic001G451200 Sobic003G311400--Sobic001G451200 Sobic002G098500 Sobic002G098500 Sobic003G311400--Sobic002G098500 Sobic006G181600 Sobic006G181600 Sobic003G311400--Sobic006G181600 Sobic002G216600 Sobic002G216600 Sobic005G204100--Sobic002G216600 Sobic009G259500 Sobic009G259500 Sobic005G204100--Sobic009G259500 Sobic002G072700 Sobic002G072700 Sobic005G204100--Sobic002G072700 Sobic007G142900 Sobic007G142900 Sobic005G204100--Sobic007G142900 Sobic005G204100--Sobic002G098500 Sobic001G221900 Sobic001G221900 Sobic005G204100--Sobic001G221900 Sobic001G384700 Sobic001G384700 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic007G189400 Sobic007G189400 Sobic005G204100--Sobic007G189400 Sobic006G146900 Sobic006G146900 Sobic002G120200--Sobic006G146900 Sobic002G034400 Sobic002G034400 Sobic002G120200--Sobic002G034400 Sobic006G260600 Sobic006G260600 Sobic002G120200--Sobic006G260600 Sobic002G120200--Sobic001G451200 Sobic002G200500 Sobic002G200500 Sobic002G120200--Sobic002G200500 Sobic004G356600 Sobic004G356600 Sobic002G120200--Sobic004G356600 Sobic009G233600 Sobic009G233600 Sobic002G120200--Sobic009G233600 Sobic006G073150 Sobic006G073150 Sobic002G120200--Sobic006G073150 Sobic006G271100 Sobic006G271100 Sobic002G120200--Sobic006G271100 Sobic001G258100--Sobic004G259101 Sobic001G258100--Sobic009G259500 Sobic003G174900 Sobic003G174900 Sobic001G258100--Sobic003G174900 Sobic001G258100--Sobic002G072700 Sobic010G010900 Sobic010G010900 Sobic001G258100--Sobic010G010900 Sobic004G168600 Sobic004G168600 Sobic001G258100--Sobic004G168600 Sobic001G258100--Sobic007G142900 Sobic001G267800 Sobic001G267800 Sobic001G258100--Sobic001G267800 Sobic001G514400 Sobic001G514400 Sobic001G258100--Sobic001G514400 Sobic004G259101--Sobic001G258100 Sobic004G259101--Sobic002G072700 Sobic004G154600 Sobic004G154600 Sobic004G259101--Sobic004G154600 Sobic009G159600 Sobic009G159600 Sobic004G259101--Sobic009G159600 Sobic004G259101--Sobic001G267800 Sobic004G259101--Sobic009G259500 Sobic004G259101--Sobic010G010900 Sobic004G259101--Sobic001G514400 Sobic009G248900 Sobic009G248900 Sobic004G259101--Sobic009G248900 Sobic008G001300--Sobic002G216600 Sobic008G001300--Sobic005G204100 Sobic004G144100 Sobic004G144100 Sobic008G001300--Sobic004G144100 Sobic010G050700 Sobic010G050700 Sobic008G001300--Sobic010G050700 Sobic008G001300--Sobic009G259500 Sobic008G001300--Sobic007G142900 Sobic002G002100 Sobic002G002100 Sobic008G001300--Sobic002G002100 Sobic009G141700 Sobic009G141700 Sobic008G001300--Sobic009G141700 Sobic010G065800 Sobic010G065800 Sobic008G001300--Sobic010G065800 Sobic007G210900 Sobic007G210900 Sobic003G420800--Sobic007G210900 Sobic002G315000 Sobic002G315000 Sobic003G420800--Sobic002G315000 Sobic003G420800--Sobic005G204100 Sobic009G154100 Sobic009G154100 Sobic003G420800--Sobic009G154100 Sobic002G179700 Sobic002G179700 Sobic003G420800--Sobic002G179700 Sobic003G333000 Sobic003G333000 Sobic003G420800--Sobic003G333000 Sobic003G420800--Sobic003G174900 Sobic001G482300 Sobic001G482300 Sobic003G420800--Sobic001G482300 Sobic001G047200 Sobic001G047200 Sobic003G420800--Sobic001G047200 Sobic001G451200--Sobic006G073150 Sobic001G267266 Sobic001G267266 Sobic001G451200--Sobic001G267266 Sobic001G451200--Sobic002G120200 Sobic007G072800 Sobic007G072800 Sobic001G451200--Sobic007G072800 Sobic009G213300 Sobic009G213300 Sobic001G451200--Sobic009G213300 Sobic010G153532 Sobic010G153532 Sobic001G451200--Sobic010G153532 Sobic001G451200--Sobic002G034400 Sobic001G419900 Sobic001G419900 Sobic001G451200--Sobic001G419900 Sobic003G221300 Sobic003G221300 Sobic001G451200--Sobic003G221300 Sobic008G038200 Sobic008G038200 Sobic002G098500--Sobic008G038200 Sobic007G065300 Sobic007G065300 Sobic002G098500--Sobic007G065300 Sobic003G096300 Sobic003G096300 Sobic002G098500--Sobic003G096300 Sobic002G098500--Sobic005G204100 Sobic010G135300 Sobic010G135300 Sobic002G098500--Sobic010G135300 Sobic010G020600 Sobic010G020600 Sobic002G098500--Sobic010G020600 Sobic002G098500--Sobic002G216600 Sobic002G098500--Sobic001G221900 Sobic007G032100 Sobic007G032100 Sobic002G098500--Sobic007G032100 Sobic002G139800 Sobic002G139800 Sobic006G181600--Sobic002G139800 Sobic006G181600--Sobic007G189400 Sobic001G228100 Sobic001G228100 Sobic006G181600--Sobic001G228100 Sobic006G181600--Sobic002G072700 Sobic009G254500 Sobic009G254500 Sobic006G181600--Sobic009G254500 Sobic006G247700 Sobic006G247700 Sobic006G181600--Sobic006G247700 Sobic001G438500 Sobic001G438500 Sobic006G181600--Sobic001G438500 Sobic009G141300 Sobic009G141300 Sobic006G181600--Sobic009G141300 Sobic005G188500 Sobic005G188500 Sobic006G181600--Sobic005G188500
Octagon: transcription factors


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