Gene annotation
Transcriptome id Sobic.003G048700.3,Sobic.003G048700.4,Sobic.003G048700.5
Synonym Sb03g004240, PID2
Functional annotation AGC_PVPK_like_kin82y.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt C5XND2
Pfam PF07714 PF00069
Panther DB PTHR24351 PTHR24351:SF70
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT2G26700 : AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
RAP-DB (Rice) LOC_Os01g07940.1 : AGC_PVPK_like_kin82y.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a032543 , Zm00025a021869 , Zm00025a019727 , Zm00025a023226 , Zm00025a040460 , Zm00025a037557 , Zm00025a033478
Brachypodium KQK06942 , KQJ94431 , KQK22531 , PNT71569
Barley HORVU5Hr1G108690.1 , HORVU5Hr1G108690.3 , HORVU5Hr1G108690.2 , HORVU5Hr1G108690.4 , HORVU3Hr1G024030.1 , HORVU1Hr1G055800.14 , HORVU1Hr1G055800.11 , HORVU1Hr1G055800.10 , HORVU1Hr1G055800.13 , HORVU1Hr1G055800.12 , HORVU3Hr1G024030.2 , HORVU3Hr1G024030.3 , HORVU6Hr1G062330.8 , HORVU6Hr1G062330.9 , HORVU6Hr1G062330.1 , HORVU4Hr1G062610.1 , HORVU1Hr1G055800.1 , HORVU1Hr1G055800.3 , HORVU1Hr1G055800.2 , HORVU1Hr1G055800.5 , HORVU1Hr1G055800.4 , HORVU1Hr1G055800.7 , HORVU1Hr1G055800.9 , HORVU1Hr1G055800.8 , HORVU1Hr1G055800.6
Wheat TraesCS6A02G242800 , TraesCS5B02G128400 , TraesCS5D02G460900 , TraesCS1D02G220100 , TraesCS3D02G129100 , TraesCS5D02G137200 , TraesCS1A02G218500 , TraesCS3B02G147300 , TraesCS5A02G129700 , TraesCS6B02G281400 , TraesCS1B02G232000 , TraesCS6D02G225100 , TraesCS5A02G450900 , TraesCS5A02G450900 , TraesCS5B02G459300 , TraesCS3A02G128200
Populus -


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cDNA sequences
Sobic.003G048700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G018901 - -
2 Sobic.006G073150 - -
3 Sobic.003G349800 domain of unknown function DUF966 domain containing protein, expressed -
4 Sobic.004G225400 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
5 Sobic.007G072800 OsFBX275 - F-box domain containing protein, expressed -
6 Sobic.001G451200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
7 Sobic.006G004000 - -
8 Sobic.001G267266 - -
9 Sobic.006G086900 pectinesterase, putative, expressed -
10 Sobic.003G037200 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.003G221300 - -
12 Sobic.002G120200 pentatricopeptide, putative, expressed -
13 Sobic.002G337300 expressed protein -
14 Sobic.003G060400 transcription regulator, putative, expressed -
15 Sobic.002G219500 ATPase, putative, expressed -
16 Sobic.006G053800 LGC1, putative, expressed -
17 Sobic.002G416200 - -
18 Sobic.009G011500 expressed protein -
19 Sobic.010G153532 - -
20 Sobic.003G311400 - -


Gene co-expression network
sample Sobic003G048700 Sobic003G048700 Sobic002G018901 Sobic002G018901 Sobic003G048700--Sobic002G018901 Sobic006G073150 Sobic006G073150 Sobic003G048700--Sobic006G073150 Sobic003G349800 Sobic003G349800 Sobic003G048700--Sobic003G349800 Sobic004G225400 Sobic004G225400 Sobic003G048700--Sobic004G225400 Sobic007G072800 Sobic007G072800 Sobic003G048700--Sobic007G072800 Sobic001G451200 Sobic001G451200 Sobic003G048700--Sobic001G451200 Sobic006G004000 Sobic006G004000 Sobic003G048700--Sobic006G004000 Sobic001G267266 Sobic001G267266 Sobic003G048700--Sobic001G267266 Sobic006G086900 Sobic006G086900 Sobic003G048700--Sobic006G086900 Sobic008G068800 Sobic008G068800 Sobic002G018901--Sobic008G068800 Sobic003G060400 Sobic003G060400 Sobic002G018901--Sobic003G060400 Sobic004G193800 Sobic004G193800 Sobic002G018901--Sobic004G193800 Sobic002G018901--Sobic003G048700 Sobic009G059600 Sobic009G059600 Sobic002G018901--Sobic009G059600 Sobic004G286900 Sobic004G286900 Sobic002G018901--Sobic004G286900 Sobic002G297800 Sobic002G297800 Sobic002G018901--Sobic002G297800 Sobic006G063300 Sobic006G063300 Sobic002G018901--Sobic006G063300 Sobic002G018901--Sobic006G073150 Sobic006G073150--Sobic001G451200 Sobic006G073150--Sobic007G072800 Sobic002G416200 Sobic002G416200 Sobic006G073150--Sobic002G416200 Sobic006G073150--Sobic001G267266 Sobic006G073150--Sobic003G048700 Sobic003G290600 Sobic003G290600 Sobic006G073150--Sobic003G290600 Sobic006G073150--Sobic002G018901 Sobic002G120200 Sobic002G120200 Sobic006G073150--Sobic002G120200 Sobic010G153532 Sobic010G153532 Sobic006G073150--Sobic010G153532 Sobic009G159600 Sobic009G159600 Sobic003G349800--Sobic009G159600 Sobic003G349800--Sobic004G225400 Sobic002G219500 Sobic002G219500 Sobic003G349800--Sobic002G219500 Sobic001G375900 Sobic001G375900 Sobic003G349800--Sobic001G375900 Sobic003G349800--Sobic003G048700 Sobic004G259101 Sobic004G259101 Sobic003G349800--Sobic004G259101 Sobic005G117100 Sobic005G117100 Sobic003G349800--Sobic005G117100 Sobic003G399400 Sobic003G399400 Sobic003G349800--Sobic003G399400 Sobic006G108700 Sobic006G108700 Sobic003G349800--Sobic006G108700 Sobic006G228100 Sobic006G228100 Sobic004G225400--Sobic006G228100 Sobic001G530300 Sobic001G530300 Sobic004G225400--Sobic001G530300 Sobic006G271100 Sobic006G271100 Sobic004G225400--Sobic006G271100 Sobic009G070000 Sobic009G070000 Sobic004G225400--Sobic009G070000 Sobic004G225400--Sobic002G219500 Sobic007G017900 Sobic007G017900 Sobic004G225400--Sobic007G017900 Sobic002G004500 Sobic002G004500 Sobic004G225400--Sobic002G004500 Sobic001G399400 Sobic001G399400 Sobic004G225400--Sobic001G399400 Sobic005G111600 Sobic005G111600 Sobic004G225400--Sobic005G111600 Sobic007G072800--Sobic006G073150 Sobic002G108600 Sobic002G108600 Sobic007G072800--Sobic002G108600 Sobic003G221300 Sobic003G221300 Sobic007G072800--Sobic003G221300 Sobic007G072800--Sobic001G451200 Sobic007G072800--Sobic003G060400 Sobic006G204200 Sobic006G204200 Sobic007G072800--Sobic006G204200 Sobic009G213300 Sobic009G213300 Sobic007G072800--Sobic009G213300 Sobic010G146200 Sobic010G146200 Sobic007G072800--Sobic010G146200 Sobic006G249000 Sobic006G249000 Sobic007G072800--Sobic006G249000 Sobic001G451200--Sobic006G073150 Sobic001G451200--Sobic001G267266 Sobic001G451200--Sobic002G120200 Sobic001G451200--Sobic007G072800 Sobic001G451200--Sobic009G213300 Sobic001G451200--Sobic010G153532 Sobic002G034400 Sobic002G034400 Sobic001G451200--Sobic002G034400 Sobic001G419900 Sobic001G419900 Sobic001G451200--Sobic001G419900 Sobic001G451200--Sobic003G221300 Sobic001G084600 Sobic001G084600 Sobic006G004000--Sobic001G084600 Sobic006G004000--Sobic010G153532 Sobic006G004000--Sobic003G060400 Sobic006G004000--Sobic006G073150 Sobic006G004000--Sobic006G204200 Sobic006G019600 Sobic006G019600 Sobic006G004000--Sobic006G019600 Sobic001G361900 Sobic001G361900 Sobic006G004000--Sobic001G361900 Sobic010G060000 Sobic010G060000 Sobic006G004000--Sobic010G060000 Sobic004G315800 Sobic004G315800 Sobic006G004000--Sobic004G315800 Sobic002G302100 Sobic002G302100 Sobic001G267266--Sobic002G302100 Sobic001G049000 Sobic001G049000 Sobic001G267266--Sobic001G049000 Sobic002G004400 Sobic002G004400 Sobic001G267266--Sobic002G004400 Sobic006G053800 Sobic006G053800 Sobic001G267266--Sobic006G053800 Sobic004G356600 Sobic004G356600 Sobic001G267266--Sobic004G356600 Sobic001G267266--Sobic002G034400 Sobic005G097700 Sobic005G097700 Sobic001G267266--Sobic005G097700 Sobic001G267266--Sobic003G221300 Sobic006G228400 Sobic006G228400 Sobic001G267266--Sobic006G228400 Sobic010G237650 Sobic010G237650 Sobic006G086900--Sobic010G237650 Sobic006G086900--Sobic002G297800 Sobic005G128000 Sobic005G128000 Sobic006G086900--Sobic005G128000 Sobic009G257300 Sobic009G257300 Sobic006G086900--Sobic009G257300 Sobic006G086900--Sobic002G108600 Sobic009G228201 Sobic009G228201 Sobic006G086900--Sobic009G228201 Sobic006G086900--Sobic004G193800 Sobic006G086900--Sobic003G060400 Sobic003G117700 Sobic003G117700 Sobic006G086900--Sobic003G117700
Octagon: transcription factors


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