Gene annotation
Transcriptome id Sobic.003G338250.1
Synonym -
Functional annotation -
UniProt A0A1W0W060
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G014500 expressed protein -
2 Sobic.009G137500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.006G255300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
4 Sobic.001G267100 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
5 Sobic.001G276800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.001G145200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
7 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
8 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
9 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
10 Sobic.007G050500 MYB family transcription factor, putative, expressed -
11 Sobic.010G241100 thaumatin family domain containing protein, expressed -
12 Sobic.005G021900 expressed protein -
13 Sobic.005G092700 expressed protein -
14 Sobic.001G304800 expressed protein -
15 Sobic.002G362700 zinc finger family protein, putative, expressed -
16 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
17 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
18 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
19 Sobic.008G083500 expressed protein -
20 Sobic.001G260701 -(PubMedID : 26976818) -


Gene co-expression network
sample Sobic003G338250 Sobic003G338250 Sobic006G014500 Sobic006G014500 Sobic003G338250--Sobic006G014500 Sobic009G137500 Sobic009G137500 Sobic003G338250--Sobic009G137500 Sobic006G255300 Sobic006G255300 Sobic003G338250--Sobic006G255300 Sobic001G267100 Sobic001G267100 Sobic003G338250--Sobic001G267100 Sobic001G276800 Sobic001G276800 Sobic003G338250--Sobic001G276800 Sobic001G145200 Sobic001G145200 Sobic003G338250--Sobic001G145200 Sobic006G187000 Sobic006G187000 Sobic003G338250--Sobic006G187000 Sobic006G105600 Sobic006G105600 Sobic003G338250--Sobic006G105600 Sobic001G160000 Sobic001G160000 Sobic003G338250--Sobic001G160000 Sobic001G345200 Sobic001G345200 Sobic006G014500--Sobic001G345200 Sobic006G014500--Sobic001G267100 Sobic006G014500--Sobic001G145200 Sobic005G098400 Sobic005G098400 Sobic006G014500--Sobic005G098400 Sobic007G050500 Sobic007G050500 Sobic006G014500--Sobic007G050500 Sobic005G091000 Sobic005G091000 Sobic006G014500--Sobic005G091000 Sobic007G111700 Sobic007G111700 Sobic006G014500--Sobic007G111700 Sobic001G381100 Sobic001G381100 Sobic006G014500--Sobic001G381100 Sobic006G074900 Sobic006G074900 Sobic006G014500--Sobic006G074900 Sobic009G137500--Sobic006G187000 Sobic009G137500--Sobic001G267100 Sobic009G137500--Sobic006G105600 Sobic009G137500--Sobic006G255300 Sobic003G366000 Sobic003G366000 Sobic009G137500--Sobic003G366000 Sobic003G016200 Sobic003G016200 Sobic009G137500--Sobic003G016200 Sobic009G137500--Sobic001G276800 Sobic008G150500 Sobic008G150500 Sobic009G137500--Sobic008G150500 Sobic001G046400 Sobic001G046400 Sobic009G137500--Sobic001G046400 Sobic006G255300--Sobic001G276800 Sobic001G068132 Sobic001G068132 Sobic006G255300--Sobic001G068132 Sobic006G255300--Sobic009G137500 Sobic006G255300--Sobic006G187000 Sobic006G197400 Sobic006G197400 Sobic006G255300--Sobic006G197400 Sobic001G246600 Sobic001G246600 Sobic006G255300--Sobic001G246600 Sobic002G175200 Sobic002G175200 Sobic006G255300--Sobic002G175200 Sobic004G330200 Sobic004G330200 Sobic006G255300--Sobic004G330200 Sobic006G255300--Sobic001G267100 Sobic001G267100--Sobic006G187000 Sobic001G267100--Sobic005G091000 Sobic001G267100--Sobic001G145200 Sobic001G267100--Sobic006G105600 Sobic001G267100--Sobic009G137500 Sobic001G267100--Sobic001G381100 Sobic001G267100--Sobic001G345200 Sobic004G168600 Sobic004G168600 Sobic001G267100--Sobic004G168600 Sobic001G267100--Sobic006G074900 Sobic001G276800--Sobic006G255300 Sobic001G276800--Sobic001G246600 Sobic001G276800--Sobic002G175200 Sobic001G276800--Sobic004G330200 Sobic001G276800--Sobic009G137500 Sobic001G276800--Sobic001G068132 Sobic001G276800--Sobic006G187000 Sobic003G350400 Sobic003G350400 Sobic001G276800--Sobic003G350400 Sobic004G311600 Sobic004G311600 Sobic001G276800--Sobic004G311600 Sobic001G145200--Sobic001G267100 Sobic001G145200--Sobic001G381100 Sobic001G145200--Sobic006G074900 Sobic001G145200--Sobic004G168600 Sobic008G190000 Sobic008G190000 Sobic001G145200--Sobic008G190000 Sobic001G145200--Sobic006G255300 Sobic001G145200--Sobic001G345200 Sobic001G145200--Sobic001G160000 Sobic005G092700 Sobic005G092700 Sobic001G145200--Sobic005G092700 Sobic006G187000--Sobic008G150500 Sobic006G187000--Sobic009G137500 Sobic006G187000--Sobic001G046400 Sobic006G187000--Sobic003G366000 Sobic004G302700 Sobic004G302700 Sobic006G187000--Sobic004G302700 Sobic006G187000--Sobic001G160000 Sobic006G187000--Sobic003G016200 Sobic003G283900 Sobic003G283900 Sobic006G187000--Sobic003G283900 Sobic006G187000--Sobic001G267100 Sobic006G105600--Sobic005G091000 Sobic006G105600--Sobic001G267100 Sobic006G124400 Sobic006G124400 Sobic006G105600--Sobic006G124400 Sobic002G296000 Sobic002G296000 Sobic006G105600--Sobic002G296000 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic004G233700 Sobic004G233700 Sobic006G105600--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic006G105600--Sobic008G083500 Sobic001G304800 Sobic001G304800 Sobic006G105600--Sobic001G304800 Sobic001G160000--Sobic006G187000 Sobic001G160000--Sobic008G190000 Sobic001G160000--Sobic003G366000 Sobic001G160000--Sobic001G381100 Sobic001G160000--Sobic005G092700 Sobic010G192500 Sobic010G192500 Sobic001G160000--Sobic010G192500 Sobic001G075700 Sobic001G075700 Sobic001G160000--Sobic001G075700 Sobic001G160000--Sobic001G267100 Sobic001G160000--Sobic005G091000
Octagon: transcription factors


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