Gene annotation
Transcriptome id Sobic.003G353500.1
Synonym PCS1, EMB24, Sb03g039590, ATASP38
Functional annotation aspartic proteinase nepenthesin precursor, putative, expressed
UniProt C5XPQ7
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF248
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G39710 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os01g62630.1 : aspartic proteinase nepenthesin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039680 , Zm00025a026881 , Zm00025a001806 , Zm00025a030979
Brachypodium KQK22356 , KQK10539
Barley HORVU3Hr1G086030.1 , HORVU4Hr1G060070.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G353500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G128100 expressed protein -
2 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
3 Sobic.003G390700 glycosyltransferase, putative, expressed -
4 Sobic.002G342800 GRAS family transcription factor domain containing protein, expressed -
5 Sobic.007G023100 CCT motif family protein, expressed -
6 Sobic.001G446400 receptor protein kinase CLAVATA1 precursor, putative, expressed -
7 Sobic.001G518000 protein kinase, putative, expressed -
8 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
9 Sobic.007G121600 - -
10 Sobic.001G464800 cyclin, putative, expressed K18811: cyclin D5, plant
11 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
12 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
13 Sobic.010G026100 expressed protein -
14 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
15 Sobic.004G118800 receptor lectin kinase like protein, putative, expressed -
16 Sobic.004G352100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
17 Sobic.010G078300 leaf senescence related protein, putative, expressed -
18 Sobic.002G203500 protein binding protein, putative, expressed -
19 Sobic.007G162400 ABC-2 type transporter domain containing protein, expressed -
20 Sobic.006G046600 expressed protein -


Gene co-expression network
sample Sobic003G353500 Sobic003G353500 Sobic007G128100 Sobic007G128100 Sobic003G353500--Sobic007G128100 Sobic005G062600 Sobic005G062600 Sobic003G353500--Sobic005G062600 Sobic003G390700 Sobic003G390700 Sobic003G353500--Sobic003G390700 Sobic002G342800 Sobic002G342800 Sobic003G353500--Sobic002G342800 Sobic007G023100 Sobic007G023100 Sobic003G353500--Sobic007G023100 Sobic001G446400 Sobic001G446400 Sobic003G353500--Sobic001G446400 Sobic001G518000 Sobic001G518000 Sobic003G353500--Sobic001G518000 Sobic001G382400 Sobic001G382400 Sobic003G353500--Sobic001G382400 Sobic007G121600 Sobic007G121600 Sobic003G353500--Sobic007G121600 Sobic007G128100--Sobic007G023100 Sobic007G128100--Sobic005G062600 Sobic007G161600 Sobic007G161600 Sobic007G128100--Sobic007G161600 Sobic008G038200 Sobic008G038200 Sobic007G128100--Sobic008G038200 Sobic001G298800 Sobic001G298800 Sobic007G128100--Sobic001G298800 Sobic003G027800 Sobic003G027800 Sobic007G128100--Sobic003G027800 Sobic003G019900 Sobic003G019900 Sobic007G128100--Sobic003G019900 Sobic008G151600 Sobic008G151600 Sobic007G128100--Sobic008G151600 Sobic003G008800 Sobic003G008800 Sobic007G128100--Sobic003G008800 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic005G062600--Sobic007G121600 Sobic001G079900 Sobic001G079900 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic008G070700 Sobic008G070700 Sobic005G062600--Sobic008G070700 Sobic005G062600--Sobic003G019900 Sobic003G250100 Sobic003G250100 Sobic003G390700--Sobic003G250100 Sobic002G196500 Sobic002G196500 Sobic003G390700--Sobic002G196500 Sobic006G170100 Sobic006G170100 Sobic003G390700--Sobic006G170100 Sobic010G255000 Sobic010G255000 Sobic003G390700--Sobic010G255000 Sobic003G204200 Sobic003G204200 Sobic003G390700--Sobic003G204200 Sobic007G201900 Sobic007G201900 Sobic003G390700--Sobic007G201900 Sobic002G112000 Sobic002G112000 Sobic003G390700--Sobic002G112000 Sobic003G390700--Sobic007G121600 Sobic003G244000 Sobic003G244000 Sobic003G390700--Sobic003G244000 Sobic009G083600 Sobic009G083600 Sobic002G342800--Sobic009G083600 Sobic004G352100 Sobic004G352100 Sobic002G342800--Sobic004G352100 Sobic003G342900 Sobic003G342900 Sobic002G342800--Sobic003G342900 Sobic002G342800--Sobic008G151600 Sobic002G342800--Sobic007G128100 Sobic002G342800--Sobic003G353500 Sobic007G147200 Sobic007G147200 Sobic002G342800--Sobic007G147200 Sobic007G033700 Sobic007G033700 Sobic002G342800--Sobic007G033700 Sobic001G464800 Sobic001G464800 Sobic002G342800--Sobic001G464800 Sobic003G090600 Sobic003G090600 Sobic007G023100--Sobic003G090600 Sobic007G023100--Sobic007G147200 Sobic002G430700 Sobic002G430700 Sobic007G023100--Sobic002G430700 Sobic006G107500 Sobic006G107500 Sobic007G023100--Sobic006G107500 Sobic007G023100--Sobic005G062600 Sobic007G023100--Sobic007G033700 Sobic007G023100--Sobic003G019900 Sobic007G023100--Sobic007G128100 Sobic006G163300 Sobic006G163300 Sobic007G023100--Sobic006G163300 Sobic007G027900 Sobic007G027900 Sobic001G446400--Sobic007G027900 Sobic009G143200 Sobic009G143200 Sobic001G446400--Sobic009G143200 Sobic002G296000 Sobic002G296000 Sobic001G446400--Sobic002G296000 Sobic008G032800 Sobic008G032800 Sobic001G446400--Sobic008G032800 Sobic003G393100 Sobic003G393100 Sobic001G446400--Sobic003G393100 Sobic001G054700 Sobic001G054700 Sobic001G446400--Sobic001G054700 Sobic005G005700 Sobic005G005700 Sobic001G446400--Sobic005G005700 Sobic010G248500 Sobic010G248500 Sobic001G446400--Sobic010G248500 Sobic007G162400 Sobic007G162400 Sobic001G446400--Sobic007G162400 Sobic002G360500 Sobic002G360500 Sobic001G518000--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic001G518000--Sobic002G417000 Sobic003G307200 Sobic003G307200 Sobic001G518000--Sobic003G307200 Sobic010G014500 Sobic010G014500 Sobic001G518000--Sobic010G014500 Sobic007G165800 Sobic007G165800 Sobic001G518000--Sobic007G165800 Sobic010G211800 Sobic010G211800 Sobic001G518000--Sobic010G211800 Sobic001G518000--Sobic001G493900 Sobic001G518000--Sobic008G038200 Sobic004G003700 Sobic004G003700 Sobic001G518000--Sobic004G003700 Sobic003G240100 Sobic003G240100 Sobic001G382400--Sobic003G240100 Sobic002G345800 Sobic002G345800 Sobic001G382400--Sobic002G345800 Sobic001G116600 Sobic001G116600 Sobic001G382400--Sobic001G116600 Sobic007G125700 Sobic007G125700 Sobic001G382400--Sobic007G125700 Sobic007G219200 Sobic007G219200 Sobic001G382400--Sobic007G219200 Sobic004G207000 Sobic004G207000 Sobic001G382400--Sobic004G207000 Sobic009G082600 Sobic009G082600 Sobic001G382400--Sobic009G082600 Sobic001G123100 Sobic001G123100 Sobic001G382400--Sobic001G123100 Sobic003G410700 Sobic003G410700 Sobic001G382400--Sobic003G410700 Sobic007G121650 Sobic007G121650 Sobic007G121600--Sobic007G121650 Sobic007G121600--Sobic005G062600 Sobic007G121600--Sobic010G092400 Sobic009G184200 Sobic009G184200 Sobic007G121600--Sobic009G184200 Sobic002G050700 Sobic002G050700 Sobic007G121600--Sobic002G050700 Sobic002G317700 Sobic002G317700 Sobic007G121600--Sobic002G317700 Sobic007G121600--Sobic003G393100 Sobic002G021200 Sobic002G021200 Sobic007G121600--Sobic002G021200 Sobic004G317000 Sobic004G317000 Sobic007G121600--Sobic004G317000
Octagon: transcription factors


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